hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10131898/chunk_1/iprscan-20080502-10131898.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1699
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF04048.5.fs Sec8 exocyst complex component specific    239.4    7.1e-69   1
PF04048.5.ls Sec8 exocyst complex component specific    235.4    1.1e-67   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF04048.5.fs   1/1       1   136 [.     9   170 .]   239.4  7.1e-69
PF04048.5.ls   1/1       1   136 [.     1   170 []   235.4  1.1e-67

Alignments of top-scoring domains:
PF04048.5.fs: domain 1 of 1, from 1 to 136: score 239.4, E = 7.1e-69
                   *->asRgrkigkdenlsnnaErieGllinvIrrdyqamVEtDCiPleLsL
                      ++R++++++++++        Glli+vIr                +L
    KIAA1699     1    KYRSTVSKSKDPS--------GLLISVIR----------------TL 23   

                   alsddtdvGrehEykrfeqlykridasLqelVheHkqdfttsiasygkis
                   ++sdd+++ re+E++r+e++y+++d++L+el+++H++++tt+i++y++i+
    KIAA1699    24 STSDDVED-RENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSIT 72   

                   ssIqnsrerIhalKesLkasKelLettrSdELkkLwaeslqykkVlevLk
                   ++I+nsr++I+++Ke+L+++K+lL+++r dEL+kLw+e++++k+Vl++L+
    KIAA1699    73 ERITNSRNKIKQVKENLLSCKMLLHCKR-DELRKLWIEGIEHKHVLNLLD 121  

                   eleELrqvPdkleel<-*
                   e+e+++qvP+kle++   
    KIAA1699   122 EIENIKQVPQKLEQC    136  

PF04048.5.ls: domain 1 of 1, from 1 to 136: score 235.4, E = 1.1e-67
                   *->mnApppesasRgrkigkdenlsnnaErieGllinvIrrdyqamVEtD
                              ++R++++++++++        Glli+vIr          
    KIAA1699     1    --------KYRSTVSKSKDPS--------GLLISVIR---------- 21   

                   CiPleLsLalsddtdvGrehEykrfeqlykridasLqelVheHkqdftts
                         +L++sdd+++ re+E++r+e++y+++d++L+el+++H++++tt+
    KIAA1699    22 ------TLSTSDDVED-RENEKGRLEEAYEKCDRDLDELIVQHYTELTTA 64   

                   iasygkisssIqnsrerIhalKesLkasKelLettrSdELkkLwaeslqy
                   i++y++i+++I+nsr++I+++Ke+L+++K+lL+++r dEL+kLw+e++++
    KIAA1699    65 IRTYQSITERITNSRNKIKQVKENLLSCKMLLHCKR-DELRKLWIEGIEH 113  

                   kkVlevLkeleELrqvPdkleel<-*
                   k+Vl++L+e+e+++qvP+kle++   
    KIAA1699   114 KHVLNLLDEIENIKQVPQKLEQC    136  

//