hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09170257/chunk_1/iprscan-20080502-09170257.nocrc
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Query sequence: KIAA1666
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00326                                                 103.1    3.2e-26   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00326    1/3     199   262 ..     1    58 []    62.3  6.1e-14
SM00326    2/3     819   883 ..     1    58 []     6.8      1.7
SM00326    3/3     936   999 ..     1    58 []    34.0    2e-05

Alignments of top-scoring domains:
SM00326: domain 1 of 3, from 199 to 262: score 62.3, E = 6.1e-14
                   *->eyvvAlYDyea......qnedELsFkkGDiitvleks.ddgWweGel
                      + + A+Y+y++ +++++  e+EL++++GD i++  + ++dg +eGel
    KIAA1666   199    KIFMAQYNYNPfegpndHPEGELPLTAGDYIYIFGDMdEDGFYEGEL 245  

                   nrtGkeGlfPsnYVeeie<-*
                   + +G++Gl+Psn+Ve i+   
    KIAA1666   246 D-DGRRGLVPSNFVEQIP    262  

SM00326: domain 2 of 3, from 819 to 883: score 6.8, E = 1.7
                   *->eyvvAlYDyea........qnedELsFkkGDiitvleks.ddgWweG
                      +++vAl Dy++   + + +  e+EL F+k + ++v    +  + +  
    KIAA1666   819    RVFVALSDYNPlvmsanlkAAEEELVFQKKQLLRVWGSQdTHDFYLS 865  

                   elnrtGkeGlfPsnYVeeie<-*
                   e+n   ++G +P+  V+e+e   
    KIAA1666   866 ECN--RQVGNIPGCLVAEME    883  

SM00326: domain 3 of 3, from 936 to 999: score 34.0, E = 2e-05
                   *->eyvvAlYDyea.......qnedELsFkkGDiitvleks.ddgWweGe
                      + ++A  Dy++++++ ++q+ + L +++GD++ v    +d+g ++Ge
    KIAA1666   936    KIMIAALDYDPgdgqmggQGKGRLALRAGDVVMVYGPMdDQGFYYGE 982  

                   lnrtGkeGlfPsnYVeeie<-*
                   l+  G +Gl+P+  +  +    
    KIAA1666   983 LG--GHRGLVPAHLLDHMS    999  

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