hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07200694/chunk_1/iprscan-20080502-07200694.nocrc
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Query sequence: KIAA1596
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02732.6.fs ERCC4 domain                                    31.2    9.6e-08   1
PF02732.6.ls ERCC4 domain                                    33.0    9.9e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02732.6.fs   1/1     922  1005 ..     1   105 []    31.2  9.6e-08
PF02732.6.ls   1/1     922  1005 ..     1   105 []    33.0  9.9e-07

Alignments of top-scoring domains:
PF02732.6.fs: domain 1 of 1, from 922 to 1005: score 31.2, E = 9.6e-08
                   *->fiiVDsREfrsilprklDFHDmviekllkkkgakveikqLeVGDYil
                       i+V  +E+ s l+        vi++l +  g+ ve+++L   DYi+
    KIAA1596   922    CILVGGHEITSGLE--------VISSLRAIHGLQVEVCPLNGCDYIV 960  

                   sprkidslevvldvcVERKtidDLisSIidGRLyeQckrLskrEqpykrp
                   s           +++VER + +   +S++ + + eQ   L++    ++r 
    KIAA1596   961 SN----------RMVVERRSQSEMLNSVNKNKFIEQIQHLQSM---FERI 997  

                   vllIEgde<-*
                    +++E d    
    KIAA1596   998 CVIVEKDR    1005 

PF02732.6.ls: domain 1 of 1, from 922 to 1005: score 33.0, E = 9.9e-07
                   *->fiiVDsREfrsilprklDFHDmviekllkkkgakveikqLeVGDYil
                       i+V  +E+ s l+        vi++l +  g+ ve+++L   DYi+
    KIAA1596   922    CILVGGHEITSGLE--------VISSLRAIHGLQVEVCPLNGCDYIV 960  

                   sprkidslevvldvcVERKtidDLisSIidGRLyeQckrLskrEqpykrp
                   s           +++VER + +   +S++ + + eQ   L++    ++r 
    KIAA1596   961 SN----------RMVVERRSQSEMLNSVNKNKFIEQIQHLQSM---FERI 997  

                   vllIEgde<-*
                    +++E d    
    KIAA1596   998 CVIVEKDR    1005 

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