hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07132331/chunk_1/iprscan-20080502-07132331.nocrc
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Query sequence: KIAA1592
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01595.10.ls Domain of unknown function DUF21               172.0    1.4e-48   1
PF01595.10.fs Domain of unknown function DUF21               170.2    4.8e-48   1
PF00571.18.fs CBS domain pair                                 44.3    1.7e-11   1
PF00571.18.ls CBS domain pair                                 44.7      3e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01595.10.fs   1/1     126   300 ..     1   208 []   170.2  4.8e-48
PF01595.10.ls   1/1     126   300 ..     1   208 []   172.0  1.4e-48
PF00571.18.ls   1/1     319   446 ..     1   114 []    44.7    3e-10
PF00571.18.fs   1/1     339   446 ..    20   114 .]    44.3  1.7e-11

Alignments of top-scoring domains:
PF01595.10.fs: domain 1 of 1, from 126 to 300: score 170.2, E = 4.8e-48
                   *->lllliillLillsaFFsasEfALvslrrsrleqlaesGdp.EK.hKk
                      l +l+i +L++ls++Fs++ ++L++l++ +l+ +++ G+++E+++  
    KIAA1592   126    LHILLITVLLVLSGIFSGLNLGLMALDPMELRIVQNCGTEkERrY-- 170  

                   rAkralkllenpdrllLstiqlGiTlvnilaGavGEpaiatllapllggl
                    A+++++++++ + l L++++lG++lvn+         +++ll+ l+g+ 
    KIAA1592   171 -ARKIEPIRRKGNYL-LCSLLLGNVLVNTS--------LTILLDNLIGS- 209  

                   glpenktslahaisvvlAfaliTfLilvfGElvPKsiAirypErvAlrvA
                                  + A+a +T+ i++fGE++P+++++r++++v+++++
    KIAA1592   210 --------------GLMAVASSTIGIVIFGEILPQALCSRHGLAVGANTI 245  

                   pplrlfyklfyPlvwllnkasanlllrllGvepaeesesavteeELkslv
                    ++++f++l++Pl+++++k    ll+ +lG e ++    ++ +e L +++
    KIAA1592   246 LLTKFFMLLTFPLSFPISK----LLDFFLGQEIRT----VYNREKLMEML 287  

                   eesaeeGvlekeE<-*
                    + +   +l keE   
    KIAA1592   288 KVTEPYNDLVKEE    300  

PF01595.10.ls: domain 1 of 1, from 126 to 300: score 172.0, E = 1.4e-48
                   *->lllliillLillsaFFsasEfALvslrrsrleqlaesGdp.EK.hKk
                      l +l+i +L++ls++Fs++ ++L++l++ +l+ +++ G+++E+++  
    KIAA1592   126    LHILLITVLLVLSGIFSGLNLGLMALDPMELRIVQNCGTEkERrY-- 170  

                   rAkralkllenpdrllLstiqlGiTlvnilaGavGEpaiatllapllggl
                    A+++++++++ + l L++++lG++lvn+         +++ll+ l+g+ 
    KIAA1592   171 -ARKIEPIRRKGNYL-LCSLLLGNVLVNTS--------LTILLDNLIGS- 209  

                   glpenktslahaisvvlAfaliTfLilvfGElvPKsiAirypErvAlrvA
                                  + A+a +T+ i++fGE++P+++++r++++v+++++
    KIAA1592   210 --------------GLMAVASSTIGIVIFGEILPQALCSRHGLAVGANTI 245  

                   pplrlfyklfyPlvwllnkasanlllrllGvepaeesesavteeELkslv
                    ++++f++l++Pl+++++k    ll+ +lG e ++    ++ +e L +++
    KIAA1592   246 LLTKFFMLLTFPLSFPISK----LLDFFLGQEIRT----VYNREKLMEML 287  

                   eesaeeGvlekeE<-*
                    + +   +l keE   
    KIAA1592   288 KVTEPYNDLVKEE    300  

PF00571.18.ls: domain 1 of 1, from 319 to 446: score 44.7, E = 3e-10
                RF    xxxxxxxxxxxxxxxxx  xxxxxxxxxxxxxxxxxx xxxxxxxxx
                   *->dvmtkdvvtvdpedttl..ealklmrengisrlPVvd.edgklvGiv
                      ++   d ++++ +d+ l+   + ++ e+g++r+PV ++e  ++v i+
    KIAA1592   319    MTQLQDCFMIR-SDAILdfNTMSEIMESGYTRIPVFEdEQSNIVDIL 364  

                RF xxxxxxxxxx       xxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxx
                   terDlllral.......tpvsdiMtrpPvitvppdtsl.ealelmlehgi
                    ++D l  + +++ ++ +++ ++ ++p v++v  dt l+  le + + + 
    KIAA1592   365 YVKD-LAFVDpddctplKTITRFYNHP-VHFVFHDTKLdAMLEEFKKGKS 412  

                RF xxxxxxxxxx         xxxxxxxxxxxxxxxxxx   
                   rhrrlpVvDe.........dgklvGivtreDilrala<-*
                    h +++V  + ++++++++  +++G+vt+eD++++++   
    KIAA1592   413 -H-LAIVQ-KvnnegegdpFYEVLGLVTLEDVIEEII    446  

PF00571.18.fs: domain 1 of 1, from 339 to 446: score 44.3, E = 1.7e-11
                RF    xxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxx       xxxx
                   *->lklmrengisrlPVvd.edgklvGivterDlllral.......tpvs
                      + ++ e+g++r+PV ++e  ++v i+ ++D l  + +++ ++ +++ 
    KIAA1592   339    MSEIMESGYTRIPVFEdEQSNIVDILYVKD-LAFVDpddctplKTIT 384  

                RF xxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxx         xx
                   diMtrpPvitvppdtsl.ealelmlehgirhrrlpVvDe.........dg
                   ++ ++p v++v  dt l+  le + + +  h +++V  + ++++++++  
    KIAA1592   385 RFYNHP-VHFVFHDTKLdAMLEEFKKGKS-H-LAIVQ-KvnnegegdpFY 430  

                RF xxxxxxxxxxxxxxxx   
                   klvGivtreDilrala<-*
                   +++G+vt+eD++++++   
    KIAA1592   431 EVLGLVTLEDVIEEII    446  

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