hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07114694/chunk_1/iprscan-20080502-07114694.nocrc
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Query sequence: KIAA1591
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                  52.5    5.6e-11   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/1     251   355 ..     1    82 []    52.5  5.6e-11

Alignments of top-scoring domains:
SM00233: domain 1 of 1, from 251 to 355: score 52.5, E = 5.6e-11
                   *->vikeGwLlkks...k.swkkryfvLfn.....gvLlyyksk..kpkg
                      + ++G+L+ ++++  ++wkkryfvL   ++ +  ++ y++k+++p++
    KIAA1591   251    MKHSGYLYALGqkvWkRWKKRYFVLVQvsqytFAMCSYREKksEPQE 297  

                   sipLsgcsvre.p..........cFeivt.drtlllqAeseeereeWvea
                    + L+g++v+ ++++++  ++   F  v ++ t +++ ++e++r  Wv+a
    KIAA1591   298 LMQLEGYTVDYtDphpglqggcmFFNAVKeGDTVIFASDDEQDRILWVQA 347  

                   lqsaiaka<-*
                   + +a+ ++   
    KIAA1591   348 MYRATGQS    355  

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