# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fj04678.fasta.nr -Q ../query/KIAA1579.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1579, 704 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7822577 sequences Expectation_n fit: rho(ln(x))= 5.8149+/-0.000191; mu= 10.7549+/- 0.011 mean_var=97.6303+/-18.708, 0's: 42 Z-trim: 56 B-trim: 0 in 0/68 Lambda= 0.129802 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119626954|gb|EAX06549.1| hypothetical protein F ( 678) 4504 854.0 0 gi|109008378|ref|XP_001090029.1| PREDICTED: simila ( 832) 4169 791.4 0 gi|194665729|ref|XP_600332.4| PREDICTED: similar t ( 890) 4086 775.8 0 gi|119626955|gb|EAX06550.1| hypothetical protein F ( 460) 3058 583.1 7.5e-164 gi|114557192|ref|XP_524729.2| PREDICTED: ribonucle ( 943) 2843 543.1 1.7e-151 gi|109475182|ref|XP_342872.3| PREDICTED: similar t ( 673) 2736 522.9 1.4e-145 gi|85702750|sp|Q7TPD6.1|RAVR2_MOUSE RecName: Full= ( 673) 2720 519.9 1.1e-144 gi|67466983|sp|Q9HCJ3.2|RAVR2_HUMAN RecName: Full= ( 691) 2654 507.6 6e-141 gi|148698928|gb|EDL30875.1| ribonucleoprotein, PTB ( 503) 2118 407.1 7.8e-111 gi|123254035|emb|CAM21386.1| ribonucleoprotein, PT ( 459) 2113 406.1 1.4e-110 gi|40850921|gb|AAH65303.1| RAVER2 protein [Homo sa ( 514) 1872 361.0 5.8e-97 gi|149044564|gb|EDL97823.1| similar to hypothetica ( 603) 1780 343.9 1e-91 gi|148698929|gb|EDL30876.1| ribonucleoprotein, PTB ( 554) 1629 315.6 3.1e-83 gi|8655685|emb|CAB94883.1| hypothetical protein [H ( 239) 1574 305.0 2.1e-80 gi|189520226|ref|XP_001338083.2| PREDICTED: simila ( 838) 1435 279.4 3.6e-72 gi|114108222|gb|AAI22908.1| Ribonucleoprotein, PTB ( 640) 1430 278.4 5.7e-72 gi|81910350|sp|Q5XI28.1|RAVR1_RAT RecName: Full=Ri ( 748) 1363 265.9 3.8e-68 gi|74759693|sp|Q8IY67.1|RAVR1_HUMAN RecName: Full= ( 606) 1359 265.0 5.5e-68 gi|47222165|emb|CAG11591.1| unnamed protein produc ( 374) 1351 263.4 1.1e-67 gi|119604500|gb|EAW84094.1| hCG2033729, isoform CR ( 884) 1355 264.4 1.2e-67 gi|123173757|ref|NP_597709.2| RAVER1 [Homo sapiens ( 756) 1353 264.0 1.4e-67 gi|133777512|gb|AAI23486.1| RAVER1 protein [Bos ta ( 716) 1341 261.7 6.4e-67 gi|12836469|dbj|BAB23670.1| unnamed protein produc ( 756) 1331 259.9 2.5e-66 gi|85701216|sp|Q9CW46.2|RAVR1_MOUSE RecName: Full= ( 748) 1330 259.7 2.8e-66 gi|194213180|ref|XP_001492770.2| PREDICTED: ribonu ( 715) 1314 256.7 2.1e-65 gi|183986231|gb|AAI66376.1| LOC100158642 protein [ ( 701) 1295 253.1 2.5e-64 gi|47682299|gb|AAH70699.1| MGC83237 protein [Xenop ( 694) 1280 250.3 1.7e-63 gi|73986949|ref|XP_533918.2| PREDICTED: similar to (1861) 1233 241.8 1.6e-60 gi|109123419|ref|XP_001105380.1| PREDICTED: simila ( 720) 1115 219.4 3.6e-54 gi|7023005|dbj|BAA91798.1| unnamed protein product ( 166) 1089 214.0 3.4e-53 gi|47220043|emb|CAG12191.1| unnamed protein produc ( 856) 1024 202.4 5.5e-49 gi|63101998|gb|AAH95698.1| Ribonucleoprotein, PTB- ( 313) 952 188.6 2.9e-45 gi|149020520|gb|EDL78325.1| RAVER1 homolog (human) ( 257) 904 179.5 1.3e-42 gi|26333527|dbj|BAC30481.1| unnamed protein produc ( 270) 898 178.4 2.9e-42 gi|210092351|gb|EEA40579.1| hypothetical protein B ( 361) 878 174.8 4.8e-41 gi|194387696|dbj|BAG61261.1| unnamed protein produ ( 230) 830 165.6 1.7e-38 gi|210124982|gb|EEA72676.1| hypothetical protein B ( 358) 777 155.9 2.4e-35 gi|149020523|gb|EDL78328.1| RAVER1 homolog (human) ( 568) 717 144.8 8.1e-32 gi|22902182|gb|AAH37565.1| RAVER1 protein [Homo sa ( 561) 694 140.5 1.6e-30 gi|198426965|ref|XP_002120230.1| PREDICTED: simila ( 851) 664 135.0 1.1e-28 gi|156226124|gb|EDO46936.1| predicted protein [Nem ( 301) 566 116.3 1.6e-23 gi|159163315|pdb|1WG1|A Chain A, Solution Structur ( 88) 509 105.2 1.1e-20 gi|212506005|gb|EEB10336.1| raver1, putative [Pedi ( 695) 467 98.0 1.2e-17 gi|215510647|gb|EEC20100.1| raver1, putative [Ixod ( 548) 425 90.1 2.3e-15 gi|159163374|pdb|1WI6|A Chain A, Solution Structur ( 88) 342 73.9 2.7e-11 gi|221109226|ref|XP_002164882.1| PREDICTED: simila (1296) 338 74.1 3.5e-10 gi|60469605|gb|EAL67594.1| SAP DNA-binding domain- (1009) 320 70.6 3e-09 gi|149020522|gb|EDL78327.1| RAVER1 homolog (human) ( 77) 258 58.1 1.3e-06 gi|162676409|gb|EDQ62892.1| predicted protein [Phy ( 507) 267 60.5 1.7e-06 gi|116788096|gb|ABK24755.1| unknown [Picea sitchen ( 506) 240 55.4 5.8e-05 >>gi|119626954|gb|EAX06549.1| hypothetical protein FLJ10 (678 aa) initn: 4504 init1: 4504 opt: 4504 Z-score: 4559.1 bits: 854.0 E(): 0 Smith-Waterman score: 4504; 100.000% identity (100.000% similar) in 678 aa overlap (27-704:1-678) 10 20 30 40 50 60 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS :::::::::::::::::::::::::::::::::: gi|119 MAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS 10 20 30 70 80 90 100 110 120 KIAA15 AEAHEGAPDPMPAALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AEAHEGAPDPMPAALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYDL 40 50 60 70 80 90 130 140 150 160 170 180 KIAA15 KYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISFT 100 110 120 130 140 150 190 200 210 220 230 240 KIAA15 SEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASALF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASALF 160 170 180 190 200 210 250 260 270 280 290 300 KIAA15 AQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGGF 220 230 240 250 260 270 310 320 330 340 350 360 KIAA15 AVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKGL 280 290 300 310 320 330 370 380 390 400 410 420 KIAA15 LPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLNK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA15 AHQNLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGSVLPLKKELGHHHGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AHQNLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGSVLPLKKELGHHHGE 400 410 420 430 440 450 490 500 510 520 530 540 KIAA15 AHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNTQEKQPATVGMAEGNFSGSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNTQEKQPATVGMAEGNFSGSQP 460 470 480 490 500 510 550 560 570 580 590 600 KIAA15 YLQSFPNLAAGSLLVGHHKQQQSQPKGTEISSGAASKNQTSLLGEPPKEIRLSKNPYLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YLQSFPNLAAGSLLVGHHKQQQSQPKGTEISSGAASKNQTSLLGEPPKEIRLSKNPYLNL 520 530 540 550 560 570 610 620 630 640 650 660 KIAA15 ASVLPSVCLSSPASKTTLHKTGIASSILDAISQGSESQHALEKCIAYSPPFGDYAQVSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ASVLPSVCLSSPASKTTLHKTGIASSILDAISQGSESQHALEKCIAYSPPFGDYAQVSSL 580 590 600 610 620 630 670 680 690 700 KIAA15 RNEKRGSSYLISAPEGGSVECVDQHSQGTGAYYMETYLKKKRVY :::::::::::::::::::::::::::::::::::::::::::: gi|119 RNEKRGSSYLISAPEGGSVECVDQHSQGTGAYYMETYLKKKRVY 640 650 660 670 >>gi|109008378|ref|XP_001090029.1| PREDICTED: similar to (832 aa) initn: 4129 init1: 4129 opt: 4169 Z-score: 4218.8 bits: 791.4 E(): 0 Smith-Waterman score: 4375; 94.318% identity (96.307% similar) in 704 aa overlap (1-704:151-832) 10 20 30 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAA ::::::::::::::::::.:: :::::::: gi|109 PPLFTPSSLLPPPLFPAVGPTLRPLPASPSPGPPPAFSLRFPWSLRGVQSRGAPGKMAAA 130 140 150 160 170 180 40 50 60 70 80 90 KIAA15 AGDGGGEGGAGLGSAAGLGPGPGLRGQGPSAEAHEGAPDPMPAALHPEEVAARLQRMQRE :::::::::::::: :::: :::: :::::::::::.:: gi|109 AGDGGGEGGAGLGS----------------------APDPAPAALPPEEVAARLQRMRRE 190 200 210 100 110 120 130 140 150 KIAA15 LSNRRKILVKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSNRRKILVKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFH 220 230 240 250 260 270 160 170 180 190 200 210 KIAA15 QYSFRGKDLIVQLQPTDALLCITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKG :::::::::::.::::::::::::.::::: ::::::::::::::::::::::::::::: gi|109 QYSFRGKDLIVHLQPTDALLCITNLPISFTLEEFEELVRAYGNIERCFLVYSEVTGHSKG 280 290 300 310 320 330 220 230 240 250 260 270 KIAA15 YGFVEYMKKDFAAKARLELLGRQLGASALFAQWMDVNLLASELIHSKCLCIDKLPSDYRD :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|109 YGFVEYMKKDFAAKARLELLGKQLGASALFAQWMDVNLLASELIHSKCLCIDKLPSDYRD 340 350 360 370 380 390 280 290 300 310 320 330 KIAA15 SEELLQIFSSVHKPVFCQLAQDEGSYVGGFAVVEYSTAEQAEEVQQAADGMTIKGSKVQV :::::.::::::::::::::::::.::::::::::::::.:::::::::::::::::::: gi|109 SEELLHIFSSVHKPVFCQLAQDEGNYVGGFAVVEYSTAEHAEEVQQAADGMTIKGSKVQV 400 410 420 430 440 450 340 350 360 370 380 390 KIAA15 SFCAPGAPGRSTLAALIAAQRVMHSNQKGLLPEPNPVQIMKSLNNPAMLQVLLQPQLCGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SFCAPGAPGRSTLAALIAAQRVMHSNQKGLLPEPNPVQIMKSLNNPAMLQVLLQPQLCGR 460 470 480 490 500 510 400 410 420 430 440 450 KIAA15 AVKPAVLGTPHSLPHLMNPSISPAFLHLNKAHQNLSHIPLAQQQLMKFENIHTNNKPGLL ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|109 AVKPAVLGTPHSLPHLMNPSISPAFLRLNKAHQNLSHIPLAQQQLMKFENIHTNNKPGLL 520 530 540 550 560 570 460 470 480 490 500 510 KIAA15 GEPPAVVLQTALGIGSVLPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFPNQHIA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GEPPAVVFQTALGIGSVLPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFPNQHIA 580 590 600 610 620 630 520 530 540 550 560 570 KIAA15 GQAGPGHSNTQEKQPATVGMAEGNFSGSQPYLQSFPNLAAGSLLVGHHKQQQSQPKGTEI :.::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 GHAGPGHSNTQEKQPATVGMAEGNFSGSQPYLQSFPNLAAGSLLAGHHKQQQSQPKGTEI 640 650 660 670 680 690 580 590 600 610 620 630 KIAA15 SSGAASKNQTSLLGEPPKEIRLSKNPYLNLASVLPSVCLSSPASKTTLHKTGIASSILDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SSGAASKNQTSLLGEPPKEIRLSKNPYLNLASVLPSVCLSSPASKTTLHKTGIASSILDA 700 710 720 730 740 750 640 650 660 670 680 690 KIAA15 ISQGSESQHALEKCIAYSPPFGDYAQVSSLRNEKRGSSYLISAPEGGSVECVDQHSQGTG ::::.::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ISQGNESQHTLEKCIAYSPPFGDYAQVSSLRNEKRGSSYLISAPEGGSVECVDQHSQGTG 760 770 780 790 800 810 700 KIAA15 AYYMETYLKKKRVY :::::::::::::: gi|109 AYYMETYLKKKRVY 820 830 >>gi|194665729|ref|XP_600332.4| PREDICTED: similar to ri (890 aa) initn: 2687 init1: 2639 opt: 4086 Z-score: 4134.4 bits: 775.8 E(): 0 Smith-Waterman score: 4086; 89.193% identity (95.389% similar) in 694 aa overlap (11-704:206-890) 10 20 30 40 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAAAGDGGGEGGA :: ::::.::: :::::::: ::::::::: gi|194 LLAAAPPPSPFSLPPRGWARSAASSRSLSPFPSSLRGARSRGAPGKMAAA-GDGGGEGGA 180 190 200 210 220 230 50 60 70 80 90 100 KIAA15 GLGSAAGLGPGPGLRGQGPSAEAHEGAPDPMPAALHPEEVAARLQRMQRELSNRRKILVK . .:: : :: .: .::. : :.::::::::::::::::.:::::::::::: gi|194 A-------APGSGPRGPSPFSEARGDARGPVPAALHPEEVAARLQRMRRELSNRRKILVK 240 250 260 270 280 110 120 130 140 150 160 KIAA15 NLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLI ::::::.::::::::.::.::::::::::::::::::::::::::::::::::::::::. gi|194 NLPQDSSCQEVHDLLQDYELKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLV 290 300 310 320 330 340 170 180 190 200 210 220 KIAA15 VQLQPTDALLCITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKD ::::::::::::::.: ::: ::::::::::::.:::::::::::::::::::::::::: gi|194 VQLQPTDALLCITNLPTSFTLEEFEELVRAYGNVERCFLVYSEVTGHSKGYGFVEYMKKD 350 360 370 380 390 400 230 240 250 260 270 280 KIAA15 FAAKARLELLGRQLGASALFAQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSS :::::::::::.:::::..:::::::::::.:::::::::::::::::::::::::.::: gi|194 FAAKARLELLGKQLGASVVFAQWMDVNLLAAELIHSKCLCIDKLPSDYRDSEELLQFFSS 410 420 430 440 450 460 290 300 310 320 330 340 KIAA15 VHKPVFCQLAQDEGSYVGGFAVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGR .::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|194 IHKPVFCQLAQDEGSYVGGFAVVEYSTAEHAEEVQQAADGMTIKGSKVQVSFCAPGAPGR 470 480 490 500 510 520 350 360 370 380 390 400 KIAA15 STLAALIAAQRVMHSNQKGLLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTP :::::::::::: :::::::::::::::::::::::::::.:::::::::.::::::::: gi|194 STLAALIAAQRVRHSNQKGLLPEPNPVQIMKSLNNPAMLQILLQPQLCGRTVKPAVLGTP 530 540 550 560 570 580 410 420 430 440 450 460 KIAA15 HSLPHLMNPSISPAFLHLNKAHQNLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQT :::::::::::::::: ::::::::::.:::::::::::::::::::::::::::.:::: gi|194 HSLPHLMNPSISPAFLPLNKAHQNLSHVPLAQQQLMKFENIHTNNKPGLLGEPPAMVLQT 590 600 610 620 630 640 470 480 490 500 510 520 KIAA15 ALGIGSVLPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNT :.:::: :::: :::: ::.::: .:::::::::.:::::::.:::::::::::::..: gi|194 AVGIGSPLPLKTELGHL-GEVHKTPNLIPTQTTITTGMGMLPFLPNQHIAGQAGPGHGST 650 660 670 680 690 700 530 540 550 560 570 580 KIAA15 QEKQPATVGMAEGNFSGSQPYLQSFPNLAAGSLLVGHHKQQQSQPKGTEISSGAASKNQT :::::: :::::::::::: ::::::::.::.::.::.::::::::: :::::::::::: gi|194 QEKQPALVGMAEGNFSGSQTYLQSFPNLTAGGLLTGHQKQQQSQPKGLEISSGAASKNQT 710 720 730 740 750 760 590 600 610 620 630 640 KIAA15 SLLGEPPKEIRLSKNPYLNLASVLPSVCLSSPASKTTLHKTGIASSILDAISQGSESQHA :::::::::::::::::::::::::::::::::::::..::::::.:::.::::.::::. gi|194 SLLGEPPKEIRLSKNPYLNLASVLPSVCLSSPASKTTVQKTGIASNILDTISQGNESQHT 770 780 790 800 810 820 650 660 670 680 690 700 KIAA15 LEKCIAYSPPFGDYAQVSSLRNEKRGSSYLISAPEGGSVECVDQHSQGTGAYYMETYLKK :::::::: :::::::::::::::::::::.::::::::: ::::::::::::::::::: gi|194 LEKCIAYSQPFGDYAQVSSLRNEKRGSSYLVSAPEGGSVEFVDQHSQGTGAYYMETYLKK 830 840 850 860 870 880 KIAA15 KRVY :::: gi|194 KRVY 890 >>gi|119626955|gb|EAX06550.1| hypothetical protein FLJ10 (460 aa) initn: 3082 init1: 3058 opt: 3058 Z-score: 3097.9 bits: 583.1 E(): 7.5e-164 Smith-Waterman score: 3058; 99.782% identity (100.000% similar) in 458 aa overlap (27-484:1-458) 10 20 30 40 50 60 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS :::::::::::::::::::::::::::::::::: gi|119 MAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS 10 20 30 70 80 90 100 110 120 KIAA15 AEAHEGAPDPMPAALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AEAHEGAPDPMPAALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYDL 40 50 60 70 80 90 130 140 150 160 170 180 KIAA15 KYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISFT 100 110 120 130 140 150 190 200 210 220 230 240 KIAA15 SEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASALF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASALF 160 170 180 190 200 210 250 260 270 280 290 300 KIAA15 AQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGGF 220 230 240 250 260 270 310 320 330 340 350 360 KIAA15 AVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKGL 280 290 300 310 320 330 370 380 390 400 410 420 KIAA15 LPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLNK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA15 AHQNLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGSVLPLKKELGHHHGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AHQNLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGSVLPLKKELGHHHGE 400 410 420 430 440 450 490 500 510 520 530 540 KIAA15 AHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNTQEKQPATVGMAEGNFSGSQP :::. gi|119 AHKSCL 460 >>gi|114557192|ref|XP_524729.2| PREDICTED: ribonucleopro (943 aa) initn: 2920 init1: 2843 opt: 2843 Z-score: 2876.1 bits: 543.1 E(): 1.7e-151 Smith-Waterman score: 4643; 97.350% identity (98.187% similar) in 717 aa overlap (1-704:227-943) 10 20 30 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAA :::::::::::::::::::::::::::::: gi|114 CGAASLYSLLPPPPFPAVGPTLRPLPASPSPGPPPAFSLRFPWSLRGVRSRWAPGKMAAA 200 210 220 230 240 250 40 50 60 70 80 90 KIAA15 AGDGGGEGGAGLGSAAGLGPGPGLRGQGPSAEAHEGAPDPMPAALHPEEVAARLQRMQRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AGDGGGEGGAGLGSAAGLGPGPGLRGQGPSAEAHEGAPDPMPAALHPEEVAARLQRMQRE 260 270 280 290 300 310 100 110 120 130 140 150 KIAA15 LSNRRKILVKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LSNRRKILVKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFH 320 330 340 350 360 370 160 170 180 190 200 210 KIAA15 QYSFRGKDLIVQLQPTDALLCITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QYSFRGKDLIVQLQPTDALLCITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKG 380 390 400 410 420 430 220 230 240 250 260 270 KIAA15 YGFVEYMKKDFAAKARLELLGRQLGASALFAQWMDVNLLASELIHSKCLCIDKLPSDYRD :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|114 YGFVEYMKKDFAAKARLELLGKQLGASALFAQWMDVNLLASELIHSKCLCIDKLPSDYRD 440 450 460 470 480 490 280 290 300 310 320 330 KIAA15 SEELLQIFSSVHKPVFCQLAQDEGSYVGGFAVVEYSTAEQAEEVQQAADGMTIKGSKVQV ::::::.::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|114 SEELLQFFSSVHKPVFCQLAQDEGSYVGGFAVVEYSTAEHAEEVQQAADGMTIKGSKVQV 500 510 520 530 540 550 340 350 360 370 380 390 KIAA15 SFCAPGAPGRSTLAALIAAQRVMHSNQKGLLPEPNPVQIMKSLNNPAMLQVLLQPQLCGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SFCAPGAPGRSTLAALIAAQRVMHSNQKGLLPEPNPVQIMKSLNNPAMLQVLLQPQLCGR 560 570 580 590 600 610 400 410 420 430 KIAA15 AVKPAVLGTPHSLPHLMNPSISPAFLHLNKAHQ-------------NLSHIPLAQQQLMK ::::::::::::::::::::::::::::::::: :.:::::::::::: gi|114 AVKPAVLGTPHSLPHLMNPSISPAFLHLNKAHQSSVMGNTSNLFLQNFSHIPLAQQQLMK 620 630 640 650 660 670 440 450 460 470 480 490 KIAA15 FENIHTNNKPGLLGEPPAVVLQTALGIGSVLPLKKELGHHHGEAHKTSSLIPTQTTITAG ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FESIHTNNKPGLLGEPPAVVLQTALGIGSVLPLKKELGHHHGEAHKTSSLIPTQTTITAG 680 690 700 710 720 730 500 510 520 530 540 550 KIAA15 MGMLPFFPNQHIAGQAGPGHSNTQEKQPATVGMAEGNFSGSQPYLQSFPNLAAGSLLVGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MGMLPFFPNQHIAGQAGPGHSNTQEKQPATVGMAEGNFSGSQPYLQSFPNLAAGSLLVGH 740 750 760 770 780 790 560 570 580 590 600 610 KIAA15 HKQQQSQPKGTEISSGAASKNQTSLLGEPPKEIRLSKNPYLNLASVLPSVCLSSPASKTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HKQQQSQPKGTEISSGAASKNQTSLLGEPPKEIRLSKNPYLNLASVLPSVCLSSPASKTT 800 810 820 830 840 850 620 630 640 650 660 670 KIAA15 LHKTGIASSILDAISQGSESQHALEKCIAYSPPFGDYAQVSSLRNEKRGSSYLISAPEGG :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|114 LHKTGIASSILDAISQGNESQHALEKCIAYSPPFGDYAQVSSLRNEKRGSSYLISAPEGG 860 870 880 890 900 910 680 690 700 KIAA15 SVECVDQHSQGTGAYYMETYLKKKRVY ::::::::::::::::::::::::::: gi|114 SVECVDQHSQGTGAYYMETYLKKKRVY 920 930 940 >>gi|109475182|ref|XP_342872.3| PREDICTED: similar to ra (673 aa) initn: 3046 init1: 1983 opt: 2736 Z-score: 2769.8 bits: 522.9 E(): 1.4e-145 Smith-Waterman score: 3383; 77.762% identity (87.500% similar) in 688 aa overlap (31-704:2-673) 10 20 30 40 50 60 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS :. ::: :: : :: ::. : : gi|109 MAARGGGAGGPGSGS----GPSAGTAG---- 10 20 70 80 90 100 110 KIAA15 AEAHEGAPDPMP-AALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYD :: : : : :::::.:::::::::.::::::::::::::::::. ::::.::.::. gi|109 -EAVEPALRPGEVAALHPQEVAARLQRMRRELSNRRKILVKNLPQDSSSQEVHELLQDYE 30 40 50 60 70 80 120 130 140 150 160 170 KIAA15 LKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISF ::::::::::::::::::::::::.::: :::.::::..: ::::::::::::::.:.:: gi|109 LKYCYVDRNKRTAFVTLLNGEQAQSAIQRFHQFSFRGRELTVQLQPTDALLCITNLPVSF 90 100 110 120 130 140 180 190 200 210 220 230 KIAA15 TSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASAL : ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|109 TLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQMGASAL 150 160 170 180 190 200 240 250 260 270 280 290 KIAA15 FAQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGG ::::::::::::::::::::::::::::: :::::::.:::.::::::::::::::. :: gi|109 FAQWMDVNLLASELIHSKCLCIDKLPSDYSDSEELLQLFSSIHKPVFCQLAQDEGSHGGG 210 220 230 240 250 260 300 310 320 330 340 350 KIAA15 FAVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKG ::::::::::.::::::.:::.:::::.::.:::::::::::::::::::::.::::::: gi|109 FAVVEYSTAEHAEEVQQVADGITIKGSQVQLSFCAPGAPGRSTLAALIAAQRAMHSNQKG 270 280 290 300 310 320 360 370 380 390 400 410 KIAA15 LLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLN ::::::::::::::::::::::::::::::::::: :::. :: ::..::. :.::.. gi|109 LLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKP-VLGVTPSLSHLLSPSLPSALLHFS 330 340 350 360 370 380 420 430 440 450 460 KIAA15 KAHQ-------------NLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGS ::.: ::: .:: :: ::::.: ::::::::::::::.::: ::.:: gi|109 KAQQSSAVGNTSSLLLQNLSPLPLIQQPLMKFDNAHTNNKPGLLGEPPAMVLQPALAIGP 390 400 410 420 430 440 470 480 490 500 510 520 KIAA15 VLPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNTQEKQPA :::: .:::: :::::::.:: .:::..::.:.:::::.: :::::::...::: : : gi|109 PLPLKTDLGHH-GEAHKTSNLIASQTTLAAGLGVLPFFPHQLTAGQAGPGRGTTQETQSA 450 460 470 480 490 500 530 540 550 560 570 580 KIAA15 TVGMAEGNFSGSQPYLQSFPNLAAGSLLVGHHKQQQSQPKGTEISSGAASKNQTSLLGEP :. .:..::::: :::.::.: .:. :.:..: :.::::.: ::::::::::::: gi|109 PVSSSEASFSGSQHYLQTFPGLPGGGPLTGNQKTLQGQPKGAE----AASKNQTSLLGEP 510 520 530 540 550 590 600 610 620 630 640 KIAA15 PKEIRLSKNPYLNLASVLPSVCLSSPASKTTLHKTGIASSILDAISQGSESQHALEKCIA ::::::::::::::::::::::::. :.: : ::::::.:::.:::::::::::::::: gi|109 PKEIRLSKNPYLNLASVLPSVCLST-AGKGTPPKTGIASNILDVISQGSESQHALEKCIA 560 570 580 590 600 610 650 660 670 680 690 700 KIAA15 YSPPFGDYAQVSSLRNEKRGSSYLISAPEGGSVECVDQHSQGTGAYYMETYLKKKRVY ::: : :.::::::::::::::::::::::: :: . :: : ::. : :::::::::: gi|109 YSPSFEDFAQVSSLRNEKRGSSYLISAPEGGPVELAGQHPQDTGVSYTETYLKKKRVY 620 630 640 650 660 670 >>gi|85702750|sp|Q7TPD6.1|RAVR2_MOUSE RecName: Full=Ribo (673 aa) initn: 3030 init1: 1965 opt: 2720 Z-score: 2753.6 bits: 519.9 E(): 1.1e-144 Smith-Waterman score: 3411; 78.343% identity (87.936% similar) in 688 aa overlap (31-704:2-673) 10 20 30 40 50 60 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS :. ::: :::: :: ::. : : gi|857 MAARGGGAGGAGSGS----GPSAGTAG---- 10 20 70 80 90 100 110 KIAA15 AEAHEGAPDPMP-AALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYD :: : : : :::::.:::::::::.::::::::::::::::::. ::::.::.::. gi|857 -EAAEPALRPGEVAALHPQEVAARLQRMRRELSNRRKILVKNLPQDSSSQEVHELLQDYE 30 40 50 60 70 80 120 130 140 150 160 170 KIAA15 LKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISF ::::::::::::::::::::::::.::: :::.::::..: ::::::::::::::.:::: gi|857 LKYCYVDRNKRTAFVTLLNGEQAQSAIQRFHQFSFRGRELTVQLQPTDALLCITNLPISF 90 100 110 120 130 140 180 190 200 210 220 230 KIAA15 TSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASAL : ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|857 TLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQMGASAL 150 160 170 180 190 200 240 250 260 270 280 290 KIAA15 FAQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGG ::::::::::::::::::::::::::::: :::::::.::..::::::::::::::. :: gi|857 FAQWMDVNLLASELIHSKCLCIDKLPSDYSDSEELLQLFSGIHKPVFCQLAQDEGSHGGG 210 220 230 240 250 260 300 310 320 330 340 350 KIAA15 FAVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKG ::::::::::.::::::.:::.:::::.::.::::::::::::::.::::::.::::::: gi|857 FAVVEYSTAEHAEEVQQVADGITIKGSQVQLSFCAPGAPGRSTLAVLIAAQRAMHSNQKG 270 280 290 300 310 320 360 370 380 390 400 410 KIAA15 LLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLN ::::::::::::::::::::::::::::::::.:: :::. :: ::..::. :.::.. gi|857 LLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAMKP-VLGVAPSLSHLLSPSLPSAILHFS 330 340 350 360 370 380 420 430 440 450 460 KIAA15 KAHQ-------------NLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGS ::.: ::: .:: :::::::.: ::::::::::::::.::: ::.:: gi|857 KAQQSSAVGNTSSLILQNLSPLPLIQQQLMKFDNAHTNNKPGLLGEPPAMVLQPALAIGP 390 400 410 420 430 440 470 480 490 500 510 520 KIAA15 VLPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNTQEKQPA :::: .:::: :::::::.::: :::..::.:::::: :: :::::::...::::: : gi|857 PLPLKTDLGHH-GEAHKTSNLIPPQTTLAAGLGMLPFFSNQLPAGQAGPGRGTTQEKQSA 450 460 470 480 490 500 530 540 550 560 570 580 KIAA15 TVGMAEGNFSGSQPYLQSFPNLAAGSLLVGHHKQQQSQPKGTEISSGAASKNQTSLLGEP .:...:..::::: :::.::.: ::. :.:..: ::::::::. :::::::::::: gi|857 SVSISEASFSGSQHYLQTFPGLPAGGPLTGNQKTPQSQPKGTEV----ASKNQTSLLGEP 510 520 530 540 550 590 600 610 620 630 640 KIAA15 PKEIRLSKNPYLNLASVLPSVCLSSPASKTTLHKTGIASSILDAISQGSESQHALEKCIA ::::::::::::::::::::::::. :.: ::::::.:::::::::::::::::::: gi|857 PKEIRLSKNPYLNLASVLPSVCLST-AGKGMPPKTGIASNILDAISQGSESQHALEKCIA 560 570 580 590 600 610 650 660 670 680 690 700 KIAA15 YSPPFGDYAQVSSLRNEKRGSSYLISAPEGGSVECVDQHSQGTGAYYMETYLKKKRVY ::: . ::::.:::::::::::::::::::: :: . :: : ::. : :::::::::: gi|857 YSPSIEDYAQASSLRNEKRGSSYLISAPEGGPVELAGQHPQDTGVSYTETYLKKKRVY 620 630 640 650 660 670 >>gi|67466983|sp|Q9HCJ3.2|RAVR2_HUMAN RecName: Full=Ribo (691 aa) initn: 2694 init1: 2654 opt: 2654 Z-score: 2686.7 bits: 507.6 E(): 6e-141 Smith-Waterman score: 4468; 98.119% identity (98.119% similar) in 691 aa overlap (27-704:1-691) 10 20 30 40 50 60 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS :::::::::::::::::::::::::::::::::: gi|674 MAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS 10 20 30 70 80 90 100 110 120 KIAA15 AEAHEGAPDPMPAALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 AEAHEGAPDPMPAALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYDL 40 50 60 70 80 90 130 140 150 160 170 180 KIAA15 KYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 KYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISFT 100 110 120 130 140 150 190 200 210 220 230 240 KIAA15 SEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASALF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 SEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASALF 160 170 180 190 200 210 250 260 270 280 290 300 KIAA15 AQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 AQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGGF 220 230 240 250 260 270 310 320 330 340 350 360 KIAA15 AVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 AVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKGL 280 290 300 310 320 330 370 380 390 400 410 420 KIAA15 LPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 LPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLNK 340 350 360 370 380 390 430 440 450 460 KIAA15 AHQ-------------NLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGSV ::: :::::::::::::::::::::::::::::::::::::::::::: gi|674 AHQSSVMGNTSNLFLQNLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGSV 400 410 420 430 440 450 470 480 490 500 510 520 KIAA15 LPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNTQEKQPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 LPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNTQEKQPAT 460 470 480 490 500 510 530 540 550 560 570 580 KIAA15 VGMAEGNFSGSQPYLQSFPNLAAGSLLVGHHKQQQSQPKGTEISSGAASKNQTSLLGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 VGMAEGNFSGSQPYLQSFPNLAAGSLLVGHHKQQQSQPKGTEISSGAASKNQTSLLGEPP 520 530 540 550 560 570 590 600 610 620 630 640 KIAA15 KEIRLSKNPYLNLASVLPSVCLSSPASKTTLHKTGIASSILDAISQGSESQHALEKCIAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 KEIRLSKNPYLNLASVLPSVCLSSPASKTTLHKTGIASSILDAISQGSESQHALEKCIAY 580 590 600 610 620 630 650 660 670 680 690 700 KIAA15 SPPFGDYAQVSSLRNEKRGSSYLISAPEGGSVECVDQHSQGTGAYYMETYLKKKRVY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 SPPFGDYAQVSSLRNEKRGSSYLISAPEGGSVECVDQHSQGTGAYYMETYLKKKRVY 640 650 660 670 680 690 >>gi|148698928|gb|EDL30875.1| ribonucleoprotein, PTB-bin (503 aa) initn: 2433 init1: 1965 opt: 2118 Z-score: 2146.1 bits: 407.1 E(): 7.8e-111 Smith-Waterman score: 2401; 77.154% identity (85.371% similar) in 499 aa overlap (1-484:21-502) 10 20 30 KIAA15 PGPPPAFSLRF-PWSLRGVRSRWAPGKMAAAAGDGGGEGG :. : : :: : : :. ::::: ::: :: gi|148 RRLRRLPRPRALAPRPARLAPARPLRFLSRFAPASPSLQRG---AGKMAA---RGGGAGG 10 20 30 40 50 40 50 60 70 80 90 KIAA15 AGLGSAAGLGPGPGLRGQGPSAEAHEGAPDPMP-AALHPEEVAARLQRMQRELSNRRKIL :: :: ::. : : :: : : : :::::.:::::::::.:::::::::: gi|148 AGSGS----GPSAGTAG-----EAAEPALRPGEVAALHPQEVAARLQRMRRELSNRRKIL 60 70 80 90 100 100 110 120 130 140 150 KIAA15 VKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKD ::::::::. ::::.::.::.::::::::::::::::::::::::.::: :::.::::.. gi|148 VKNLPQDSSSQEVHELLQDYELKYCYVDRNKRTAFVTLLNGEQAQSAIQRFHQFSFRGRE 110 120 130 140 150 160 160 170 180 190 200 210 KIAA15 LIVQLQPTDALLCITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMK : ::::::::::::::.::::: ::::::::::::::::::::::::::::::::::::: gi|148 LTVQLQPTDALLCITNLPISFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMK 170 180 190 200 210 220 220 230 240 250 260 270 KIAA15 KDFAAKARLELLGRQLGASALFAQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIF :::::::::::::::.:::::::::::::::::::::::::::::::::: :::::::.: gi|148 KDFAAKARLELLGRQMGASALFAQWMDVNLLASELIHSKCLCIDKLPSDYSDSEELLQLF 230 240 250 260 270 280 280 290 300 310 320 330 KIAA15 SSVHKPVFCQLAQDEGSYVGGFAVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAP :..::::::::::::::. ::::::::::::.::::::.:::.:::::.::.:::::::: gi|148 SGIHKPVFCQLAQDEGSHGGGFAVVEYSTAEHAEEVQQVADGITIKGSQVQLSFCAPGAP 290 300 310 320 330 340 340 350 360 370 380 390 KIAA15 GRSTLAALIAAQRVMHSNQKGLLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLG ::::::.::::::.:::::::::::::::::::::::::::::::::::::::.:: ::: gi|148 GRSTLAVLIAAQRAMHSNQKGLLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAMKP-VLG 350 360 370 380 390 400 400 410 420 430 440 KIAA15 TPHSLPHLMNPSISPAFLHLNKAHQ-------------NLSHIPLAQQQLMKFENIHTNN . :: ::..::. :.::..::.: ::: .:: :::::::.: :::: gi|148 VAPSLSHLLSPSLPSAILHFSKAQQSSAVGNTSSLILQNLSPLPLIQQQLMKFDNAHTNN 410 420 430 440 450 460 450 460 470 480 490 500 KIAA15 KPGLLGEPPAVVLQTALGIGSVLPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFP ::::::::::.::: ::.:: :::: .:::: :::::. gi|148 KPGLLGEPPAMVLQPALAIGPPLPLKTDLGHH-GEAHKSK 470 480 490 500 510 520 530 540 550 560 KIAA15 NQHIAGQAGPGHSNTQEKQPATVGMAEGNFSGSQPYLQSFPNLAAGSLLVGHHKQQQSQP >>gi|123254035|emb|CAM21386.1| ribonucleoprotein, PTB-bi (459 aa) initn: 2427 init1: 1965 opt: 2113 Z-score: 2141.5 bits: 406.1 E(): 1.4e-110 Smith-Waterman score: 2385; 79.701% identity (88.248% similar) in 468 aa overlap (31-484:2-458) 10 20 30 40 50 60 KIAA15 PGPPPAFSLRFPWSLRGVRSRWAPGKMAAAAGDGGGEGGAGLGSAAGLGPGPGLRGQGPS :. ::: :::: :: ::. : : gi|123 MAARGGGAGGAGSGS----GPSAGTAG---- 10 20 70 80 90 100 110 KIAA15 AEAHEGAPDPMP-AALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDYD :: : : : :::::.:::::::::.::::::::::::::::::. ::::.::.::. gi|123 -EAAEPALRPGEVAALHPQEVAARLQRMRRELSNRRKILVKNLPQDSSSQEVHELLQDYE 30 40 50 60 70 80 120 130 140 150 160 170 KIAA15 LKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCITNVPISF ::::::::::::::::::::::::.::: :::.::::..: ::::::::::::::.:::: gi|123 LKYCYVDRNKRTAFVTLLNGEQAQSAIQRFHQFSFRGRELTVQLQPTDALLCITNLPISF 90 100 110 120 130 140 180 190 200 210 220 230 KIAA15 TSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASAL : ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|123 TLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQMGASAL 150 160 170 180 190 200 240 250 260 270 280 290 KIAA15 FAQWMDVNLLASELIHSKCLCIDKLPSDYRDSEELLQIFSSVHKPVFCQLAQDEGSYVGG ::::::::::::::::::::::::::::: :::::::.::..::::::::::::::. :: gi|123 FAQWMDVNLLASELIHSKCLCIDKLPSDYSDSEELLQLFSGIHKPVFCQLAQDEGSHGGG 210 220 230 240 250 260 300 310 320 330 340 350 KIAA15 FAVVEYSTAEQAEEVQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALIAAQRVMHSNQKG ::::::::::.::::::.:::.:::::.::.::::::::::::::.::::::.::::::: gi|123 FAVVEYSTAEHAEEVQQVADGITIKGSQVQLSFCAPGAPGRSTLAVLIAAQRAMHSNQKG 270 280 290 300 310 320 360 370 380 390 400 410 KIAA15 LLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLN ::::::::::::::::::::::::::::::::.:: :::. :: ::..::. :.::.. gi|123 LLPEPNPVQIMKSLNNPAMLQVLLQPQLCGRAMKP-VLGVAPSLSHLLSPSLPSAILHFS 330 340 350 360 370 380 420 430 440 450 460 KIAA15 KAHQ-------------NLSHIPLAQQQLMKFENIHTNNKPGLLGEPPAVVLQTALGIGS ::.: ::: .:: :::::::.: ::::::::::::::.::: ::.:: gi|123 KAQQSSAVGNTSSLILQNLSPLPLIQQQLMKFDNAHTNNKPGLLGEPPAMVLQPALAIGP 390 400 410 420 430 440 470 480 490 500 510 520 KIAA15 VLPLKKELGHHHGEAHKTSSLIPTQTTITAGMGMLPFFPNQHIAGQAGPGHSNTQEKQPA :::: .:::: :::::. gi|123 PLPLKTDLGHH-GEAHKSK 450 704 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 03:54:23 2009 done: Thu Mar 5 03:58:18 2009 Total Scan time: 1649.500 Total Display time: 0.350 Function used was FASTA [version 34.26.5 April 26, 2007]