# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fh20205.fasta.nr -Q ../query/KIAA1562.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1562, 1136 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7822935 sequences Expectation_n fit: rho(ln(x))= 5.5049+/-0.000185; mu= 12.6572+/- 0.010 mean_var=82.6200+/-15.872, 0's: 35 Z-trim: 56 B-trim: 75 in 1/66 Lambda= 0.141102 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|212276496|sp|Q9HCL0.3|PCD18_HUMAN RecName: Full (1135) 7455 1528.3 0 gi|158257468|dbj|BAF84707.1| unnamed protein produ (1134) 7436 1524.4 0 gi|194208449|ref|XP_001915698.1| PREDICTED: protoc (1128) 7284 1493.4 0 gi|209573159|sp|A7MB46.1|PCD18_BOVIN RecName: Full (1134) 7269 1490.4 0 gi|119625545|gb|EAX05140.1| protocadherin 18, isof (1093) 7155 1467.2 0 gi|119625546|gb|EAX05141.1| protocadherin 18, isof (1092) 7136 1463.3 0 gi|17864896|gb|AAL47095.1|AF416735_1 protocadherin (1134) 6996 1434.8 0 gi|30354448|gb|AAH52198.1| Protocadherin 18 [Mus m (1134) 6994 1434.4 0 gi|209573226|sp|Q8VHR0.2|PCD18_MOUSE RecName: Full (1134) 6991 1433.8 0 gi|148703243|gb|EDL35190.1| protocadherin 18, isof (1134) 6989 1433.4 0 gi|197245732|gb|AAI68716.1| Unknown (protein for M (1135) 6989 1433.4 0 gi|149064852|gb|EDM15003.1| protocadherin 18 (pred (1134) 6970 1429.5 0 gi|109075676|ref|XP_001086925.1| PREDICTED: simila (1124) 6673 1369.1 0 gi|114596066|ref|XP_001135980.1| PREDICTED: protoc ( 914) 6028 1237.7 0 gi|54311358|gb|AAH84899.1| Protocadherin 18 [Xenop (1145) 5908 1213.3 0 gi|119625544|gb|EAX05139.1| protocadherin 18, isof ( 872) 5728 1176.6 0 gi|6808080|emb|CAB70755.1| hypothetical protein [H ( 709) 4704 968.1 0 gi|47218475|emb|CAG03747.1| unnamed protein produc (1259) 4411 908.6 0 gi|47209841|emb|CAF96670.1| unnamed protein produc (1203) 4084 842.1 0 gi|164604870|dbj|BAF96395.2| protocadherin 18 [Dan (1150) 3947 814.2 0 gi|161339215|gb|ABX64360.1| protocadherin 18 [Dani (1123) 3784 781.0 0 gi|148703242|gb|EDL35189.1| protocadherin 18, isof ( 572) 3587 740.6 5.6e-211 gi|194391346|dbj|BAG60791.1| unnamed protein produ ( 346) 2365 491.7 2.9e-136 gi|42542548|gb|AAH66445.1| Wu:fq40g12 [Danio rerio (1001) 2297 478.2 9.8e-132 gi|125829617|ref|XP_689835.2| PREDICTED: protocadh (1137) 2229 464.4 1.6e-127 gi|115292041|gb|AAI21911.1| Protocadherin 10 [Xeno (1009) 2205 459.5 4.3e-126 gi|49257671|gb|AAH74360.1| MGC84237 protein [Xenop ( 997) 2180 454.4 1.4e-124 gi|47212024|emb|CAF96450.1| unnamed protein produc ( 969) 2174 453.2 3.3e-124 gi|194386128|dbj|BAG59628.1| unnamed protein produ ( 315) 2104 438.6 2.7e-120 gi|47228024|emb|CAF97653.1| unnamed protein produc (1074) 2100 438.1 1.2e-119 gi|47218472|emb|CAG03744.1| unnamed protein produc (1022) 2051 428.2 1.2e-116 gi|47227015|emb|CAG05907.1| unnamed protein produc ( 940) 2041 426.1 4.5e-116 gi|143330521|gb|ABO93196.1| paraxial protocadherin ( 998) 2039 425.7 6.3e-116 gi|57112567|ref|XP_549133.1| PREDICTED: similar to (1098) 2010 419.8 4.1e-114 gi|157426845|ref|NP_065817.2| protocadherin 19 iso (1100) 2003 418.4 1.1e-113 gi|194680343|ref|XP_602429.4| PREDICTED: similar t (1098) 2000 417.8 1.7e-113 gi|149640037|ref|XP_001512989.1| PREDICTED: simila (1098) 1998 417.4 2.2e-113 gi|168273220|dbj|BAG10449.1| protocadherin-19 prec (1101) 1996 417.0 2.9e-113 gi|143330542|gb|ABO93197.1| protocadherin 19 [Gall (1086) 1994 416.6 3.8e-113 gi|194228094|ref|XP_001914715.1| PREDICTED: protoc (1170) 1993 416.4 4.7e-113 gi|149055462|gb|EDM07046.1| protocadherin 19 (pred (1098) 1990 415.8 6.8e-113 gi|157426851|ref|NP_001098716.1| protocadherin 19 (1097) 1988 415.4 9e-113 gi|47682330|gb|AAH70019.1| Protocadherin 10b [Dani (1026) 1987 415.1 9.9e-113 gi|28189085|dbj|BAC56231.1| protocadherin 10 [Dani (1026) 1987 415.1 9.9e-113 gi|148688470|gb|EDL20417.1| mCG11037, isoform CRA_ (1098) 1981 413.9 2.4e-112 gi|73989071|ref|XP_857178.1| PREDICTED: similar to (1039) 1974 412.5 6.2e-112 gi|120537643|gb|AAI29244.1| Wu:fc83e05 protein [Da (1078) 1969 411.5 1.3e-111 gi|77798553|gb|ABB03451.1| protocadherin PCNS [Xen ( 977) 1957 409.0 6.6e-111 gi|28839624|gb|AAH47955.1| MGC52553 protein [Xenop ( 979) 1942 406.0 5.5e-110 gi|198250508|gb|ACH85236.1| paraxial protocadherin ( 979) 1939 405.3 8.3e-110 >>gi|212276496|sp|Q9HCL0.3|PCD18_HUMAN RecName: Full=Pro (1135 aa) initn: 7455 init1: 7455 opt: 7455 Z-score: 8195.2 bits: 1528.3 E(): 0 Smith-Waterman score: 7455; 100.000% identity (100.000% similar) in 1135 aa overlap (2-1136:1-1135) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|158257468|dbj|BAF84707.1| unnamed protein product [ (1134 aa) initn: 5345 init1: 5345 opt: 7436 Z-score: 8174.3 bits: 1524.4 E(): 0 Smith-Waterman score: 7436; 99.912% identity (99.912% similar) in 1135 aa overlap (2-1136:1-1134) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|158 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|194208449|ref|XP_001915698.1| PREDICTED: protocadhe (1128 aa) initn: 7284 init1: 7284 opt: 7284 Z-score: 8007.1 bits: 1493.4 E(): 0 Smith-Waterman score: 7284; 97.961% identity (99.734% similar) in 1128 aa overlap (9-1136:1-1128) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::.:.:::: .::.::::::::::::::::::::::::::::.::: gi|194 MHFRFVFAILMVSFNAEVLSKNLKYRIYEEQRVGSVIARLSEDVADVLVKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|194 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|194 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS ::::::::::::::::::::.::::::::::::::::::::::::::::::::.:::::: gi|194 NATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH ::::::::::::::::::::::::::::::::::::::::.::::::::.:::::.:::: gi|194 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPTLRNNTAEISIPKGADSGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ ::::::::::::.::::::.::::::::::.::::::::::::::.:::::::::::::: gi|194 VTRIRAIDRDSGANAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|194 DKGNPQLHTKVLLKCMILEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|194 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS ::::::::::::::::::::::::::::::::::::.::.:::::::::::::::::::: gi|194 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDSGDNSTSSLLSEMSSVFQRLLPPS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::::::::.::::::::::::::::::::::::::::::::::::::: :::::::::: gi|194 LDTYSECSEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 >>gi|209573159|sp|A7MB46.1|PCD18_BOVIN RecName: Full=Pro (1134 aa) initn: 5245 init1: 5245 opt: 7269 Z-score: 7990.6 bits: 1490.4 E(): 0 Smith-Waterman score: 7269; 97.181% identity (99.295% similar) in 1135 aa overlap (2-1136:1-1134) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :.:::::::: ::::::.:::: ::::::::::::::::::::::::::::::::.::: gi|209 MYQMNAKMHFTFVFALLVVSFNLDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ ::::::::::::::.:::::::::::::::: :::::::::::::::::::::::::::: gi|209 NPSTVRFRAMQRGNTPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|209 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|209 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS ::::::::::::::::::::.::::::::::::::::::::::::::::::::.:::::: gi|209 NATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|209 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYDTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|209 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::::::::::::::::.::::::::::.::::::::::::::.:::::::::::.:: gi|209 VTRIRAIDRDSGVNAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVVIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::.::::::::::::::::::: :::::::::::::::::::::::: gi|209 DKGNPQLHTKVLLKCVIFEYAESVTSTAMTSVSQAPLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|209 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|209 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|209 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS :::::::::::.::.:::::::::::::::::..::.::::::::::::::::::::: : gi|209 QQHPHQSLEDDVQPVDSGEKKKSFSTFGKDSPSEEDSGDTSTSSLLSEMSSVFQRLLPAS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::::::.:.:::::::::::::::::::::::::::::::::::::.: :::::::::: gi|209 LDTYSECTEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTNNSGPPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|119625545|gb|EAX05140.1| protocadherin 18, isoform (1093 aa) initn: 7155 init1: 7155 opt: 7155 Z-score: 7865.4 bits: 1467.2 E(): 0 Smith-Waterman score: 7155; 100.000% identity (100.000% similar) in 1089 aa overlap (2-1090:1-1089) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::: gi|119 QPSSKWLPAMGGDP 1080 1090 >>gi|119625546|gb|EAX05141.1| protocadherin 18, isoform (1092 aa) initn: 5345 init1: 5345 opt: 7136 Z-score: 7844.5 bits: 1463.3 E(): 0 Smith-Waterman score: 7136; 99.908% identity (99.908% similar) in 1089 aa overlap (2-1090:1-1088) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|119 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::: gi|119 QPSSKWLPAMGGDP 1080 1090 >>gi|17864896|gb|AAL47095.1|AF416735_1 protocadherin 18 (1134 aa) initn: 5056 init1: 5056 opt: 6996 Z-score: 7690.2 bits: 1434.8 E(): 0 Smith-Waterman score: 6996; 92.687% identity (98.150% similar) in 1135 aa overlap (2-1136:1-1134) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::::.::::::..:::.. :.::::.:::::::::::::::::::::::::::::::: gi|178 MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ :::.:::::: :::::::::::..::::::: :::::::::::::::::::.:::::::: gi|178 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN ::::::.::::::::::::: .:::::::::::::::::::::::::::::::::::::: gi|178 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :.::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|178 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI ::::::::: :: :::::::::::::::::::::::::::.:::::::::::::.::::: gi|178 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::.::::::: :::::::::::::::::::::::::::::::::::::::::::.:::: gi|178 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT ::::::.::.:::::::::::.::::::::::::::.::::::::::::::::::::::: gi|178 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS ::::::::::::::::::::.::::::.:.::::::::::::::.::::::::::::::: gi|178 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::.:::::::::.:::::::::::::::::::::::::::::: gi|178 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH ::::::::::::: ::: :::::::::::::::::::::::..::::::.:::::::::: gi|178 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::..:::::.:::.::.::.::::::::.:::::::::::::.:.: ::: :::::: gi|178 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::.: :::::::.::.:.::::::::::::::.:::::::::::::::::::::::::: gi|178 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|178 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|178 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS ::: ::.:.::.:::..:::::::::::::::.:::.::.:::::::::::::::::: : gi|178 QQHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPAS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::.:::.: :::::::::::: .:: :::::::::::::::::::.. : :::::::: gi|178 LDTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTSSSGTPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|178 QPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|30354448|gb|AAH52198.1| Protocadherin 18 [Mus muscu (1134 aa) initn: 5056 init1: 5056 opt: 6994 Z-score: 7688.0 bits: 1434.4 E(): 0 Smith-Waterman score: 6994; 92.687% identity (98.150% similar) in 1135 aa overlap (2-1136:1-1134) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::::.::::::..:::.. :.::::.:::::::::::::::::::::::::::::::: gi|303 MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ :::.:::::: :::::::::::..::::::: :::::::::::::::::::.:::::::: gi|303 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN ::::::.::::::::::::: .:::::::::::::::::::::::::::::::::::::: gi|303 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :.::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|303 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI ::::::::: :: :::::::::::::::::::::::::::.:::::::::::::.::::: gi|303 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::.::::::: :::::::::::::::::::::::::::::::::::::::::::.:::: gi|303 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT ::::::.::.:::::::::::.::::::::::::::.::::::::::::::::::::::: gi|303 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS ::::::::::::::::::::.::::::.:.::::::::::::::.::::::::::::::: gi|303 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::.:::::::::.:::::::::::::::::::::::::::::: gi|303 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH ::::::::::::: ::: :::::::::::::::::::::::..::::::.:::::::::: gi|303 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::..:::::.:::.::.::.::::::::.:::::::::::::.:.: ::: :::::: gi|303 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::.: :::::::.::.:.::::::::::::::.:::::::::::::::::::::::::: gi|303 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|303 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|303 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS ::: ::.:.::.:::..:::::::::::::::.:::.::.:::::::::::::::::: : gi|303 QQHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPAS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::.:::.: :::::::::::: .:: :::::::::::::::::::.. : :::::::: gi|303 LDTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|303 QPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|209573226|sp|Q8VHR0.2|PCD18_MOUSE RecName: Full=Pro (1134 aa) initn: 5051 init1: 5051 opt: 6991 Z-score: 7684.7 bits: 1433.8 E(): 0 Smith-Waterman score: 6991; 92.599% identity (98.150% similar) in 1135 aa overlap (2-1136:1-1134) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::::.::::::..:::.. :.::::.:::::::::::::::::::::::::::::::: gi|209 MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ :::.:::::: :::::::::::..::::::: :::::::::::::::::::.:::::::: gi|209 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN ::::::.::::::::::::: .:::::::::::::::::::::::::::::::::::::: gi|209 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :.::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|209 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI ::::::::: :: :::::::::::::::::::::::::::.:::::::::::::.::::: gi|209 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::.::::::: :::::::::::::::::::::::::::::::::::::::::::.:::: gi|209 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT ::::::.::.:::::::::::.::::::::::::::.::::::::::::::::::::::: gi|209 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS ::::::::::::::::::::.::::::.:.::::::::::::::.::::::::::::::: gi|209 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::.:::::::::.:::::::::::::::::::::::::::::: gi|209 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH ::::::::::::: ::: :::::::::::::::::::::::..::::::.:::::::::: gi|209 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::..:::::.:::.::.::.::::::::.:::::::::::::.:.: .:: :::::: gi|209 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSAEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::.: :::::::.::.:.::::::::::::::.:::::::::::::::::::::::::: gi|209 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|209 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|209 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS ::: ::.:.::.:::..:::::::::::::::.:::.::.:::::::::::::::::: : gi|209 QQHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPAS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::.:::.: :::::::::::: .:: :::::::::::::::::::.. : :::::::: gi|209 LDTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTSSSGTPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|209 QPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|148703243|gb|EDL35190.1| protocadherin 18, isoform (1134 aa) initn: 5051 init1: 5051 opt: 6989 Z-score: 7682.5 bits: 1433.4 E(): 0 Smith-Waterman score: 6989; 92.599% identity (98.150% similar) in 1135 aa overlap (2-1136:1-1134) 10 20 30 40 50 60 KIAA15 PMHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::::.::::::..:::.. :.::::.:::::::::::::::::::::::::::::::: gi|148 MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 KIAA15 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ :::.:::::: :::::::::::..::::::: :::::::::::::::::::.:::::::: gi|148 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA15 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN ::::::.::::::::::::: .:::::::::::::::::::::::::::::::::::::: gi|148 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA15 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS :.::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|148 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA15 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI ::::::::: :: :::::::::::::::::::::::::::.:::::::::::::.::::: gi|148 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA15 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM :::.::::::: :::::::::::::::::::::::::::::::::::::::::::.:::: gi|148 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA15 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT ::::::.::.:::::::::::.::::::::::::::.::::::::::::::::::::::: gi|148 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 KIAA15 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS ::::::::::::::::::::.::::::.:.::::::::::::::.::::::::::::::: gi|148 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA15 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::.:::::::::.:::::::::::::::::::::::::::::: gi|148 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 KIAA15 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH ::::::::::::: ::: :::::::::::::::::::::::..::::::.:::::::::: gi|148 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 KIAA15 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ :::::..:::::.:::.::.::.::::::::.:::::::::::::.:.: .:: :::::: gi|148 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSAEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 KIAA15 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL :::.: :::::::.::.:.::::::::::::::.:::::::::::::::::::::::::: gi|148 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 KIAA15 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 KIAA15 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|148 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH 780 790 800 810 820 830 850 860 870 880 890 900 KIAA15 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 910 920 930 940 950 960 KIAA15 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|148 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 KIAA15 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS ::: ::.:.::.:::..:::::::::::::::.:::.::.:::::::::::::::::: : gi|148 QQHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPAS 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 KIAA15 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV :::.:::.: :::::::::::: .:: :::::::::::::::::::.. : :::::::: gi|148 LDTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSV 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 KIAA15 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|148 QPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 1136 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 02:48:29 2009 done: Thu Mar 5 02:51:54 2009 Total Scan time: 1719.950 Total Display time: 1.010 Function used was FASTA [version 34.26.5 April 26, 2007]