hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05502150/chunk_1/iprscan-20080502-05502150.nocrc
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Query sequence: KIAA1543
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08683.1.ls Protein of unknown function (DUF1781)          354.2     2e-103   1
PF08683.1.fs Protein of unknown function (DUF1781)          352.2   8.1e-103   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF08683.1.fs   1/1     776   905 ..     1   131 []   352.2 8.1e-103
PF08683.1.ls   1/1     776   905 ..     1   131 []   354.2   2e-103

Alignments of top-scoring domains:
PF08683.1.fs: domain 1 of 1, from 776 to 905: score 352.2, E = 8.1e-103
                   *->sgpKLFkePsAKSNrgiIlNAlshCcLAGkVNepqKqkiLeelakse
                      +gp+L+kePsAKSN++iI+NAlshCcLAGkVNepqK++iLee++ks+
    KIAA1543   776    TGPRLYKEPSAKSNKFIIHNALSHCCLAGKVNEPQKNRILEEIEKSK 822  

                   anHFLILFRDsgCQfRAlYsydpeteeltklaGtGPrkitekMvdklfKY
                   anHFLILFRDs+CQfRAlY++++eteel++laG+GPr++t++Mv++++KY
    KIAA1543   823 ANHFLILFRDSSCQFRALYTLSGETEELSRLAGYGPRTVTPAMVEGIYKY 872  

                   nSgrKqFtQItptKhlSvsvDAfTIhdhLWQkKr<-*
                   nS+rK+FtQI p+K++S+svDAfTI++hLWQ+K+   
    KIAA1543   873 NSDRKRFTQI-PAKTMSMSVDAFTIQGHLWQGKK    905  

PF08683.1.ls: domain 1 of 1, from 776 to 905: score 354.2, E = 2e-103
                   *->sgpKLFkePsAKSNrgiIlNAlshCcLAGkVNepqKqkiLeelakse
                      +gp+L+kePsAKSN++iI+NAlshCcLAGkVNepqK++iLee++ks+
    KIAA1543   776    TGPRLYKEPSAKSNKFIIHNALSHCCLAGKVNEPQKNRILEEIEKSK 822  

                   anHFLILFRDsgCQfRAlYsydpeteeltklaGtGPrkitekMvdklfKY
                   anHFLILFRDs+CQfRAlY++++eteel++laG+GPr++t++Mv++++KY
    KIAA1543   823 ANHFLILFRDSSCQFRALYTLSGETEELSRLAGYGPRTVTPAMVEGIYKY 872  

                   nSgrKqFtQItptKhlSvsvDAfTIhdhLWQkKr<-*
                   nS+rK+FtQI p+K++S+svDAfTI++hLWQ+K+   
    KIAA1543   873 NSDRKRFTQI-PAKTMSMSVDAFTIQGHLWQGKK    905  

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