hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05401817/chunk_1/iprscan-20080502-05401817.nocrc
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Query sequence: KIAA1537
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00064                                                  96.0    4.4e-24   1
SM00593                                                  89.8    3.2e-22   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00593     1/1     118   180 ..     1    68 []    89.8  3.2e-22
SM00064     1/1     545   612 ..     1    81 []    96.0  4.4e-24

Alignments of top-scoring domains:
SM00593: domain 1 of 1, from 118 to 180: score 89.8, E = 3.2e-22
                   *->frAwirlaLneklLsswLnlLlsdrkllskyYepwAflrsaeadpee
                      +rAw+rlaL++k++  +L++L+  r+lls++Ye +A+++      ee
    KIAA1537   118    ARAWLRLALMQKKMADYLRCLIIQRDLLSEFYEYHALMME-----EE 159  

                   geqlltlLqgLsaldfnlpvd<-*
                   g+ + +lL+gL+++d nl+v+   
    KIAA1537   160 GAVIVGLLVGLNVIDANLCVK    180  

SM00064: domain 1 of 1, from 545 to 612: score 96.0, E = 4.4e-24
                   *->etaphWvpDeeasnClmnCgkeFtlvtrRrHHCRnCGrifCskCssk
                          +W +D+ea +C   C+keF+l  +R+HHCRnCG ifC+ Cs++
    KIAA1537   545    LQGLVWLKDKEATHC-KLCEKEFSL-SKRKHHCRNCGEIFCNACSDN 589  

                   kaplpklgkekkngknedftpvRVCdsCyerlsk<-*
                   ++plp+  k           pvRVCdsC++ l     
    KIAA1537   590 ELPLPSSPK-----------PVRVCDSCHALLIQ    612  

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