hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05203024/chunk_1/iprscan-20080502-05203024.nocrc
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Query sequence: KIAA1525
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                  85.4    6.9e-21   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00225    1/2     145   247 ..     1   114 []    58.2  1.1e-12
SM00225    2/2     250   400 ..     1   114 []    27.2   0.0023

Alignments of top-scoring domains:
SM00225: domain 1 of 2, from 145 to 247: score 58.2, E = 1.1e-12
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      +Dv l+ ++         + f++  H+a+Laa+   +p+Fk+l++s+
    KIAA1525   145    TDVDLIFQE---------TCFPV--HRAILAAR---CPFFKTLLSSs 177  

                   .....ieldDeall.ievspeaFralLnflYt.kldlpeedvenveelLe
                   ++ + +++ D  + +  ++ + F alL++lYt+++ + ++ ++nv+ l +
    KIAA1525   178 peygaEIIMD--INtAGIDMPMFSALLHYLYTgEFGMEDSRFQNVDILVQ 225  

                   lAdfldSYGqip.lvelCeefllknl<-*
                   l + +    + p+  ++  + l ++    
    KIAA1525   226 LSEEF----GTPnSLDVDMRGLFDYM    247  

SM00225: domain 2 of 2, from 250 to 400: score 27.2, E = 0.0023
                   *->cDvtlvvggdlggd...........naegkkfhasqHkavLaacrrd
                       Dv+l  +     d++  +  ++++n   ++++a  Hkav +a+   
    KIAA1525   250    YDVVLSFSS----DselveafggnqNCLDEELKA--HKAVISAR--- 287  

                   SpyFkalfes..................ieldDeallievspeaFralLn
                   Sp+F++l+  + +++++ ++++ +++++i+ld++     +  +    +L+
    KIAA1525   288 SPFFRNLLQRrirtgeeitdrtlrtptrIILDES----IIPKKYATVILH 333  

                   flYt.kldlpeed........................venveelLelAdf
                    +Yt+ +dl+  ++ +++ ++ ++ +    ++++ ++ e+++el ++A f
    KIAA1525   334 CMYTdVVDLSV-LhcspsvgslsevqalvagkpnmtrAEEAMELYHIALF 382  

                   ldSYGqip.lvelCeefllknl<-*
                   l    +   l++ Ce+++ +++   
    KIAA1525   383 L----EFNmLAQGCEDIIAESI    400  

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