hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04405203/chunk_1/iprscan-20080502-04405203.nocrc
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Query sequence: KIAA1502
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF01755.8.ls    Glycosyltransferase family 25 (LPS bi   250.4    3.4e-72   1
PF01755.8.fs    Glycosyltransferase family 25 (LPS bi   248.7    1.1e-71   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF01755.8.fs      1/1     318   502 ..     1   242 []   248.7  1.1e-71
PF01755.8.ls      1/1     318   502 ..     1   242 []   250.4  3.4e-72

Alignments of top-scoring domains:
PF01755.8.fs: domain 1 of 1, from 318 to 502: score 248.7, E = 1.1e-71
                   *->mikiyvISLkrapdRRehIqkefeklfeknllNnipFqFFDAidgke
                      +++++vISL+r+pdRRe++ + ++++       +i+  ++DA+dg++
    KIAA1502   318    FDEVFVISLARRPDRRERMLASLWEM-------EISGRVVDAVDGWM 357  

                   lneLHPLvkHlhpsfiqikekllqelhllfkllnfllrskyagrpLTlGE
                   ln+                    +++++l  +l+++++++y+gr+LT+GE
    KIAA1502   358 LNS--------------------SAIRNLGVDLLPGYQDPYSGRTLTKGE 387  

                   iGCflSHysLWekcvelnleyiiIlEDDvilsenFkeiLefllkeinkkk
                   +GCflSHys+We++v ++l++++++EDDv++++nF+ +Le+l+++++++k
    KIAA1502   388 VGCFLSHYSIWEEVVARGLARVLVFEDDVRFESNFRGRLERLMEDVEAEK 437  

                   eleflrlgewkktrfdendkevvkLetflpdskkykrtkiadygnraddl
                     + l+++++k+++  e++++v  L  +++++++y               
    KIAA1502   438 LSWDLIYLGRKQVN-PEKETAVEGLPGLVVAGYSY--------------- 471  

                   vhfyllksghaGTaGYlitpkaAkkLLkylknwpsdellpvDelm<-*
                              +T++Y + + +A+kLL+++   p++++lpvDe++   
    KIAA1502   472 -----------WTLAYALRLAGARKLLASQ---PLRRMLPVDEFL    502  

PF01755.8.ls: domain 1 of 1, from 318 to 502: score 250.4, E = 3.4e-72
                   *->mikiyvISLkrapdRRehIqkefeklfeknllNnipFqFFDAidgke
                      +++++vISL+r+pdRRe++ + ++++       +i+  ++DA+dg++
    KIAA1502   318    FDEVFVISLARRPDRRERMLASLWEM-------EISGRVVDAVDGWM 357  

                   lneLHPLvkHlhpsfiqikekllqelhllfkllnfllrskyagrpLTlGE
                   ln+                    +++++l  +l+++++++y+gr+LT+GE
    KIAA1502   358 LNS--------------------SAIRNLGVDLLPGYQDPYSGRTLTKGE 387  

                   iGCflSHysLWekcvelnleyiiIlEDDvilsenFkeiLefllkeinkkk
                   +GCflSHys+We++v ++l++++++EDDv++++nF+ +Le+l+++++++k
    KIAA1502   388 VGCFLSHYSIWEEVVARGLARVLVFEDDVRFESNFRGRLERLMEDVEAEK 437  

                   eleflrlgewkktrfdendkevvkLetflpdskkykrtkiadygnraddl
                     + l+++++k+++  e++++v  L  +++++++y               
    KIAA1502   438 LSWDLIYLGRKQVN-PEKETAVEGLPGLVVAGYSY--------------- 471  

                   vhfyllksghaGTaGYlitpkaAkkLLkylknwpsdellpvDelm<-*
                              +T++Y + + +A+kLL+++   p++++lpvDe++   
    KIAA1502   472 -----------WTLAYALRLAGARKLLASQ---PLRRMLPVDEFL    502  

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