hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00250011/chunk_1/iprscan-20080502-00250011.nocrc
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Query sequence: KIAA1351
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00400.22.ls WD domain, G-beta repeat                        55.1    2.2e-13   7
PF00400.22.fs WD domain, G-beta repeat                        49.9    4.3e-13   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00400.22.fs   1/7      70   118 ..     1    38 []    22.1    3e-05
PF00400.22.ls   1/7      70   118 ..     1    38 []    24.1  0.00047
PF00400.22.fs   5/7     730   755 ..    10    38 .]    12.5    0.015

Alignments of top-scoring domains:
PF00400.22.fs: domain 1 of 7, from 70 to 118: score 22.1, E = 3e-05
                   *->geck.vl.gHtstVtcvafspd.........sgpllasgSrDgtiki
                       + ++vl+ H++ V  v+++ ++   + +++++ +las+  +g+i +
    KIAA1351    70    AQTLqVLeKHKADVVKVKWAREnyhhnigspYCLRLASADVNGKIIV 116  

                   Wd<-*
                   Wd   
    KIAA1351   117 WD    118  

PF00400.22.ls: domain 1 of 7, from 70 to 118: score 24.1, E = 0.00047
                   *->geck.vl.gHtstVtcvafspd.........sgpllasgSrDgtiki
                       + ++vl+ H++ V  v+++ ++   + +++++ +las+  +g+i +
    KIAA1351    70    AQTLqVLeKHKADVVKVKWAREnyhhnigspYCLRLASADVNGKIIV 116  

                   Wd<-*
                   Wd   
    KIAA1351   117 WD    118  

PF00400.22.fs: domain 5 of 7, from 730 to 755: score 12.5, E = 0.015
                   *->stVtcvafspdsgpllasgSrDgtikiWd<-*
                      +++tc+a+  d   +l+ g  Dg++  Wd   
    KIAA1351   730    GSITCIAWKGD---TLVLGDMDGNLNFWD    755  

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