hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23364049/chunk_1/iprscan-20080501-23364049.nocrc
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Query sequence: KIAA1322
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00164                                                 199.2    3.8e-55   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00164    1/1     407   643 ..     1   310 []   199.2  3.8e-55

Alignments of top-scoring domains:
SM00164: domain 1 of 1, from 407 to 643: score 199.2, E = 3.8e-55
                   *->vrkGvppslRgeVWklLlnaqpmntsnweraqkakdaesqflvvndd
                      +++G+pps+Rg+VW l +++  + t+++++               ++
    KIAA1322   407    WWQGIPPSVRGKVWSLAIGNELNITHELFD-------------ICLA 440  

                   rlkdeYsrllnqtapkdkstdleqavssnnkdfeeqPLsiwnffqdndsl
                   r k+++++l + +++ +  +d+ ++++    d+e              sl
    KIAA1322   441 RAKERWRSLSTGGSEVEN-EDAGFSAA----DREA-------------SL 472  

                   dqIekDlkRtfpelsfFqfrsrdnqkevllddengpgqesLrrvLkaYsl
                     I +D++Rtfp+l  Fq+              +gp++++L+ +L aY  
    KIAA1322   473 ELIKLDISRTFPNLCIFQQ--------------GGPYHDMLHSILGAYTC 508  

                   ynpehivgYcQGmnflaapLLlvmpiydEedAFwcfvkLmerylpnflfk
                   y+p+  vgY+QGm+f+aa+L l++   d +dAF++f++L++ +++ ++f 
    KIAA1322   509 YRPD--VGYVQGMSFIAAVLILNL---DTADAFIAFSNLLNKPCQMAFF- 552  

                   dtnnfytpdlsglqadqlvldslleeylPeLykHLqeqdkqskkkhvdkl
                         + d   +   +  ++ ++ee lP+L+ H+++            +
    KIAA1322   553 ------RVDHGLMLTYFAAFEVFFEENLPKLFAHFKK------------N 584  

                   eidpslyalrWfLtlFarelPledvlRiwDvlfaellrlgseflfkiala
                    ++p++y++ W++tl+++ lPl++++RiwDv+  +    g+eflf++al 
    KIAA1322   585 NLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRD----GEEFLFRTALG 630  

                   iLklnedkllkld<-*
                   iLkl ed+l k+d   
    KIAA1322   631 ILKLFEDILTKMD    643  

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