hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23364049/chunk_1/iprscan-20080501-23364049.nocrc
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Query sequence: KIAA1322
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00566.9.fs TBC domain                                      89.1    1.8e-24   2
PF00566.9.ls TBC domain                                      78.2    2.3e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00566.9.ls   1/1     409   641 ..     1   219 []    78.2  2.3e-20
PF00566.9.fs   2/2     470   641 ..    44   219 .]    89.0  1.9e-24

Alignments of top-scoring domains:
PF00566.9.ls: domain 1 of 1, from 409 to 641: score 78.2, E = 2.3e-20
                   *->vkeGvpsstrakVWavcsgA........yqlrYAsageYerll....
                         G p s r+kVW +  g + + +++      A a e  r l++++
    KIAA1322   409    --QGIPPSVRGKVWSLAIGNelnithelFDICLARAKERWRSLstgg 453  

                   ....rrgdekesq....avdkIekDvkRtLvkesaFqsrGKGegiskLrr
                   ++ +++ ++  +++++ + + I  D++Rt +    Fq    G+    L  
    KIAA1322   454 seveNEDAGFSAAdreaSLELIKLDISRTFPNLCIFQ--QGGPYHDMLHS 501  

                   vLvAYswknPdvgYcQGMNVvaApfLllykSEeqAFyfLdrLlenvvPlK
                   +L AY   +PdvgY+QGM  +aA + l      +AF  + +Ll   +   
    KIAA1322   502 ILGAYTCYRPDVGYVQGMSFIAAVLILNL-DTADAFIAFSNLLNKPCQMA 550  

                   YylpdldGvrlDqkvLdsfveellprLYeYLlskgvdlkvvsLpwfLsLy
                   ++  d    +     ++ f ee lp+L+ +     ++ +++   w+ +Ly
    KIAA1322   551 FFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLY 600  

                   attlPleeAlrIfDiLFadGivllfrvaLAvLkilkeqiLda<-*
                     +lPl+ A rI+D +  dG   lfr aL +Lk + e+iL     
    KIAA1322   601 SKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLF-EDILTK    641  

PF00566.9.fs: domain 2 of 2, from 470 to 641: score 89.0, E = 1.9e-24
                   *->qavdkIekDvkRtLvkesaFqsrGKGegiskLrrvLvAYswknPdvg
                      ++ + I  D++Rt +    Fq    G+    L  +L AY   +Pdvg
    KIAA1322   470    ASLELIKLDISRTFPNLCIFQ--QGGPYHDMLHSILGAYTCYRPDVG 514  

                   YcQGMNVvaApfLllykSEeqAFyfLdrLlenvvPlKYylpdldGvrlDq
                   Y+QGM  +aA + l      +AF  + +Ll   +   ++  d    +   
    KIAA1322   515 YVQGMSFIAAVLILNL-DTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYF 563  

                   kvLdsfveellprLYeYLlskgvdlkvvsLpwfLsLyattlPleeAlrIf
                     ++ f ee lp+L+ +     ++ +++   w+ +Ly  +lPl+ A rI+
    KIAA1322   564 AAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIW 613  

                   DiLFadGivllfrvaLAvLkilkeqiLda<-*
                   D +  dG   lfr aL +Lk + e+iL     
    KIAA1322   614 DVFCRDGEEFLFRTALGILKLF-EDILTK    641  

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