hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23230705/chunk_1/iprscan-20080501-23230705.nocrc
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Query sequence: KIAA1314
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00620.17.fs RhoGAP domain                                  175.0    2.5e-51   1
PF00620.17.ls RhoGAP domain                                  176.9    4.7e-50   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00620.17.fs   1/1     358   511 ..     1   155 []   175.0  2.5e-51
PF00620.17.ls   1/1     358   511 ..     1   155 []   176.9  4.7e-50

Alignments of top-scoring domains:
PF00620.17.fs: domain 1 of 1, from 358 to 511: score 175.0, E = 2.5e-51
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      Pl+++k  e +e+ GL++EGI+R+sG+++++k+ re++d     d++
    KIAA1314   358    PLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKF 404  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefi.eaaaksedeeerle
                    ++  +   +A +LK F+ReLP++L++ e++++fi++   + ++   + +
    KIAA1314   405 KWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFIsL-MERGPHVKVQFQ 453  

                   alrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLl
                   al+++++ LP+aNrd  ++L+ ++n+V++n+++N+M+  N+++v++P+L+
    KIAA1314   454 ALHLMVMALPDANRDAAQALMTFFNKVIANESKNRMSLWNISTVMAPNLF 503  

                   rppdgdsad<-*
                    ++++ ++d   
    KIAA1314   504 FSRSK-HSD    511  

PF00620.17.ls: domain 1 of 1, from 358 to 511: score 176.9, E = 4.7e-50
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      Pl+++k  e +e+ GL++EGI+R+sG+++++k+ re++d     d++
    KIAA1314   358    PLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKF 404  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefi.eaaaksedeeerle
                    ++  +   +A +LK F+ReLP++L++ e++++fi++   + ++   + +
    KIAA1314   405 KWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFIsL-MERGPHVKVQFQ 453  

                   alrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLl
                   al+++++ LP+aNrd  ++L+ ++n+V++n+++N+M+  N+++v++P+L+
    KIAA1314   454 ALHLMVMALPDANRDAAQALMTFFNKVIANESKNRMSLWNISTVMAPNLF 503  

                   rppdgdsad<-*
                    ++++ ++d   
    KIAA1314   504 FSRSK-HSD    511  

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