hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22421292/chunk_1/iprscan-20080501-22421292.nocrc
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Query sequence: KIAA1290
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
TIGR00239  2oxo_dh_E1: 2-oxoglutarate dehydrogenase,   1011.3   1.1e-301   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
TIGR00239    1/1      44  1001 ..     1   990 []  1011.3 1.1e-301

Alignments of top-scoring domains:
TIGR00239: domain 1 of 1, from 44 to 1001: score 1011.3, E = 1.1e-301
                   *->flgganlgyieelyeaylkdPssvdpswretfdelpgpgipapeqfh
                        gg   +y+ee+y a+l++P+sv+ sw+++f e +        +f 
    KIAA1290    44    SKGGGGSSYMEEMYFAWLENPQSVHKSWDSFFREASEE------AFS 84   

                   apspsyfrrlagaapkgtvtagdpdenaslvkllqllcrayrfrGhlkan
                     +    +    ++    ++     + ++ ++ +q l ray++rGh  a 
    KIAA1290    85 GSAQPRPPSVVHESRSAVSSRTKTSKLVEDHLAVQSLIRAYQIRGHHVAQ 134  

                   ldPlgysfGsnwdepkppeld.....lsyyglteedldetfnlgpgvlpk
                   ldPlg+   +  d  +p +l ++ ++l +y+l e+dld++f l+   +  
    KIAA1290   135 LDPLGIL-DADLDSFVPSDLIttidkLAFYDLQEADLDKEFQLPTTTFIG 183  

                   dardgpkklgnglelleylkktycgsiglefdhvpdfeekdWlqekiesg
                       +   l+ ++e++  l++tyc  iglef+ + d e+++W+++k e++
    KIAA1290   184 G---SENTLS-LREIIRRLENTYCQHIGLEFMFINDVEQCQWIRQKFETP 229  

                   lepfqfnseeklsafldrltaaegferflgakfpgakrfsleGldalvPg
                       qf+seek+  +l rl  +  fe fl +k+  +krf+leG + ++P 
    KIAA1290   230 -GVMQFSSEEKRT-LLARLVRSMRFEDFLARKWSSEKRFGLEGCEVMIPA 277  

                   lkelirhsvksGtedvvlGmahrGrlnvlvnvlgkppeslfdefagkpas
                   lk++i++s+++G+e+v+lGm hrGrlnvl+nv++k  e +f +f  k   
    KIAA1290   278 LKTIIDKSSEMGIENVILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEA 327  

                   dlpsedPlesatdGtGdvkyhlGrfgsdf.ttdgklvhlplafnPshlei
                    +          +G+GdvkyhlG++ ++ + +  + + l+l++nPshle 
    KIAA1290   328 AD----------EGSGDVKYHLGMYHERInRVTNRNITLSLVANPSHLEA 367  

                   vsPvvlGstrarlerlndlGyPvpeetkvlaillhGdaafaGqGvvqetl
                   v+Pvv G+t+a +  + d      +  kv++il+hGdaafaGqGvv+et 
    KIAA1290   368 VDPVVQGKTKAEQFYRGD-----AQGKKVMSILVHGDAAFAGQGVVYETF 412  

                   nlsslrgysvGGtihivinnqiGfttsnpadarstpycsdlakgieaPif
                    ls l+ y + Gt+h+v+nnqiGftt +p+ ars+py++d+a+ + aPif
    KIAA1290   413 HLSDLPSYTTNGTVHVVVNNQIGFTT-DPRMARSSPYPTDVARVVNAPIF 461  

                   hvnaddpeavafafrlaveyrntfkrdvlidlvgyrrhGhneadePsatq
                   hvnaddpeav ++  +a+e+rntf++dv++dlv+yrr Ghne+deP +tq
    KIAA1290   462 HVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYRRRGHNEMDEPMFTQ 511  

                   PllydkikkhptprkvyadklvsegvvteedvtehkkWvwnlyrdalekg
                   Pl+y+ i ++  + k yadkl+ eg+vt+++ +e        y    e +
    KIAA1290   512 PLMYKQIHRQVPVLKKYADKLIAEGTVTLQEFEE----EIAKYDRICEEA 557  

                   ddvvpswrewltaawewlksPpelpeewlpgypdk....vpesrlkelgk
                        +++ ++   w  +  P + + +  p   + + +++pe  l  +g 
    KIAA1290   558 YGRSKDKKILHIKHWLDSPWPGFFNVDGEPKSMTCpatgIPEDMLTHIGS 607  

                   llgewp.eglefhprlakiygdrgkalfdgeklldWglaeslafatlldd
                   + +++p e +++h  l++i+  r  a  +  + +dW+lae +af++ll++
    KIAA1290   608 VASSVPlEDFKIHTGLSRILRGR--ADMTKNRTVDWALAEYMAFGSLLKE 655  

                   GtpvrlsGedsgrGtffhrhavlhdqe.sgagytPlshlhngkgdfavwn
                   G+ vrlsG+d++rGtf+hrh vlhdqe +  + +P++hl   ++ ++v n
    KIAA1290   656 GIHVRLSGQDVERGTFSHRHHVLHDQEvDRRTCVPMNHLWPDQAPYTVCN 705  

                   splseggvlgfeyGyaltsPetlvlWeaqfGdfangaqvvidqfisgGeq
                   s+lse+gvlgfe Gya++sP  lvlWeaqfGdf n+aq +idqfis G++
    KIAA1290   706 SSLSEYGVLGFELGYAMASPNALVLWEAQFGDFHNTAQCIIDQFISTGQA 755  

                   kWgrkcGlvlllPhGyeGqGPehssgrlerflqlaaedPryfPseek..l
                   kW r  G+vlllPhG eG GPehss+r erflq++++d   +P+  k+  
    KIAA1290   756 KWVRHNGIVLLLPHGMEGMGPEHSSARPERFLQMSNDDSDAYPAFTKdfE 805  

                   qrqhqdcnwqvcvpttpaqlfhilrrqaklllrefrrPlvllspksllrh
                     q  dcnw v++ +tpa++fh+lrrq    l  fr+Pl++++pksllrh
    KIAA1290   806 VSQLYDCNWIVVNCSTPANYFHVLRRQI---LLPFRKPLIIFTPKSLLRH 852  

                   Plavssleelsegg.fqpvigeieegglsldpeevkrlvlcsGkvyydls
                   P a ss +++++g++fq vi   e+g     pe+v+rl+ c+Gkvyydl 
    KIAA1290   853 PEAKSSFDQMVSGTsFQRVI--PEDGAAARAPEQVQRLIFCTGKVYYDL- 899  

                   vheqrrengdkdlailrieqlyPfPhkglkellepypnlkeivWcqeePl
                   v e+  ++ ++ +ai r+eq+ PfP+  +k+  e+yp   e+ Wcqee  
    KIAA1290   900 VKERSSQDLEEKVAITRLEQISPFPFDLIKQEAEKYPGA-ELAWCQEEHK 948  

                   nqGaWgysepyltevlpegdkykdvklryaGrppsgspavGypslhlkee
                   n+G + y++p++ ++l          + y+Gr p+++pa G  + hl   
    KIAA1290   949 NMGYYDYISPRFMTILRRA-----RPIWYVGRDPAAAPATGNRNTHLVSL 993  

                   dnllkdal<-*
                   + +l  a+   
    KIAA1290   994 KKFLDTAF    1001 

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