# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fh09938.fasta.nr -Q ../query/KIAA1238.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1238, 408 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825663 sequences Expectation_n fit: rho(ln(x))= 4.9753+/-0.000184; mu= 11.6009+/- 0.010 mean_var=69.1442+/-13.652, 0's: 31 Z-trim: 52 B-trim: 1414 in 1/65 Lambda= 0.154240 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|109095606|ref|XP_001118430.1| PREDICTED: hypoth ( 455) 2666 602.2 7.5e-170 gi|73997696|ref|XP_543825.2| PREDICTED: hypothetic ( 428) 2574 581.7 1e-163 gi|194211666|ref|XP_001916098.1| PREDICTED: hypoth ( 386) 2554 577.2 2.1e-162 gi|194037858|ref|XP_001927870.1| PREDICTED: hypoth ( 386) 2550 576.4 3.9e-162 gi|122145573|sp|Q0VCE9.1|RIMKB_BOVIN RecName: Full ( 386) 2531 572.1 7.3e-161 gi|126340001|ref|XP_001368145.1| PREDICTED: simila ( 386) 2529 571.7 1e-160 gi|109472534|ref|XP_342750.3| PREDICTED: hypotheti ( 387) 2509 567.2 2.2e-159 gi|81895264|sp|Q80WS1.1|RIMKB_MOUSE RecName: Full= ( 387) 2498 564.8 1.2e-158 gi|26333243|dbj|BAC30339.1| unnamed protein produc ( 330) 2132 483.3 3.5e-134 gi|119609015|gb|EAW88609.1| family with sequence s ( 307) 1910 433.9 2.4e-119 gi|82181081|sp|Q66HZ2.1|RIMKB_DANRE RecName: Full= ( 405) 1849 420.4 3.7e-115 gi|47211272|emb|CAF96644.1| unnamed protein produc ( 401) 1844 419.3 7.9e-115 gi|126330260|ref|XP_001367054.1| PREDICTED: simila ( 391) 1798 409.0 9.3e-112 gi|109003352|ref|XP_001088222.1| PREDICTED: simila ( 645) 1766 402.1 1.9e-109 gi|73976733|ref|XP_539562.2| PREDICTED: similar to ( 391) 1763 401.2 2.1e-109 gi|114556069|ref|XP_001164308.1| PREDICTED: family ( 695) 1757 400.1 8.1e-109 gi|143458650|sp|Q8IXN7.2|RIMKA_HUMAN RecName: Full ( 391) 1751 398.6 1.3e-108 gi|109477129|ref|XP_001073980.1| PREDICTED: simila ( 507) 1695 386.2 9e-105 gi|149035428|gb|EDL90109.1| rCG50366 [Rattus norve ( 380) 1692 385.4 1.1e-104 gi|148698492|gb|EDL30439.1| cDNA sequence BC057371 ( 411) 1686 384.1 3.1e-104 gi|26338610|dbj|BAC32976.1| unnamed protein produc ( 380) 1682 383.2 5.4e-104 gi|81885742|sp|Q6PFX8.1|RIMKA_MOUSE RecName: Full= ( 380) 1682 383.2 5.4e-104 gi|24981035|gb|AAH39737.1| Family with sequence si ( 350) 1553 354.5 2.2e-95 gi|40225326|gb|AAH21977.2| FAM80B protein [Homo sa ( 236) 1541 351.7 1e-94 gi|194207613|ref|XP_001497561.2| PREDICTED: simila ( 482) 1534 350.3 5.3e-94 gi|12855934|dbj|BAB30506.1| unnamed protein produc ( 251) 1511 345.0 1.1e-92 gi|194665882|ref|XP_583916.4| PREDICTED: similar t ( 340) 1510 344.9 1.6e-92 gi|169145664|emb|CAQ14794.1| novel protein similar ( 265) 1474 336.8 3.5e-90 gi|109108130|ref|XP_001092272.1| PREDICTED: hypoth ( 506) 1403 321.2 3.3e-85 gi|170284849|gb|AAI61236.1| LOC100145548 protein [ ( 315) 1353 309.9 5.1e-82 gi|149508734|ref|XP_001511443.1| PREDICTED: simila ( 236) 1275 292.5 6.8e-77 gi|149435377|ref|XP_001519475.1| PREDICTED: hypoth ( 273) 760 177.9 2.4e-42 gi|169145665|emb|CAQ14795.1| novel protein similar ( 98) 587 139.1 4.2e-31 gi|55665381|emb|CAH70661.1| family with sequence s ( 97) 572 135.7 4.3e-30 gi|19915214|gb|AAM04777.1| ribosomal protein S6 mo ( 301) 495 119.0 1.5e-24 gi|20906929|gb|AAM32043.1| Ribosomal protein S6 mo ( 301) 494 118.8 1.7e-24 gi|119767634|gb|ABM00205.1| ribosomal protein S6 m ( 309) 485 116.8 7e-24 gi|117613180|gb|ABK48634.1| alpha-L-glutamate liga ( 338) 483 116.4 1e-23 gi|120559178|gb|ABM25105.1| alpha-L-glutamate liga ( 331) 475 114.6 3.4e-23 gi|24348136|gb|AAN55242.1|AE015662_4 ribosomal pro ( 330) 472 113.9 5.4e-23 gi|88816844|gb|EAR26665.1| ribosomal protein S6 mo ( 312) 470 113.4 7.1e-23 gi|113885216|gb|ABI39268.1| alpha-L-glutamate liga ( 336) 469 113.2 8.8e-23 gi|151364977|gb|ABS07977.1| alpha-L-glutamate liga ( 328) 466 112.6 1.4e-22 gi|125997279|gb|ABN61354.1| alpha-L-glutamate liga ( 328) 466 112.6 1.4e-22 gi|160860519|gb|ABX49053.1| alpha-L-glutamate liga ( 328) 466 112.6 1.4e-22 gi|113889209|gb|ABI43260.1| alpha-L-glutamate liga ( 336) 465 112.3 1.6e-22 gi|153091028|gb|EDN73033.1| ribosomal protein S6-- ( 303) 403 98.5 2.1e-18 gi|83849711|gb|EAP87579.1| Glutathione synthase [C ( 292) 399 97.6 3.8e-18 gi|198258989|gb|EDY83297.1| alpha-L-glutamate liga ( 407) 399 97.7 5e-18 gi|145267766|gb|EDK07763.1| ribosomal protein S6 m ( 298) 397 97.2 5.3e-18 >>gi|109095606|ref|XP_001118430.1| PREDICTED: hypothetic (455 aa) initn: 2666 init1: 2666 opt: 2666 Z-score: 3205.6 bits: 602.2 E(): 7.5e-170 Smith-Waterman score: 2666; 99.752% identity (100.000% similar) in 404 aa overlap (5-408:52-455) 10 20 30 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFL :.:::::::::::::::::::::::::::: gi|109 PACGFEAHYRKHHGKYSHFNEYNRNIPPISRHYIQEEIIQARKHKLIKMCSSVAAKLWFL 30 40 50 60 70 80 40 50 60 70 80 90 KIAA12 TDRRIREDYPQKEILRALKAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TDRRIREDYPQKEILRALKAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQ 90 100 110 120 130 140 100 110 120 130 140 150 KIAA12 VVVVRVPTPWVQSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VVVVRVPTPWVQSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDT 150 160 170 180 190 200 160 170 180 190 200 210 KIAA12 FSYGGHENFAKMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FSYGGHENFAKMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLF 210 220 230 240 250 260 220 230 240 250 260 270 KIAA12 QKYVKESHGRDVRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QKYVKESHGRDVRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQV 270 280 290 300 310 320 280 290 300 310 320 330 KIAA12 SNILGMDVCGIDLLMKDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SNILGMDVCGIDLLMKDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRL 330 340 350 360 370 380 340 350 360 370 380 390 KIAA12 TRRMSLLSVVSTASETSEPELGPPASTAVDNMSASSSSVDSDPESTERELLTKLPGGLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TRRMSLLSVVSTASETSEPELGPPASTAVDNMSASSSSVDSDPESTERELLTKLPGGLFN 390 400 410 420 430 440 400 KIAA12 MNQLLANEIKLLVD :::::::::::::: gi|109 MNQLLANEIKLLVD 450 >>gi|73997696|ref|XP_543825.2| PREDICTED: hypothetical p (428 aa) initn: 2574 init1: 2574 opt: 2574 Z-score: 3095.3 bits: 581.7 E(): 1e-163 Smith-Waterman score: 2574; 98.728% identity (99.491% similar) in 393 aa overlap (16-408:36-428) 10 20 30 40 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIREDYPQ :: : ::::::::::::::::::::::::: gi|739 VMLTCMIYRELLHNYMRLKNRHSGRNNPGKRKSKQIKMCSSVAAKLWFLTDRRIREDYPQ 10 20 30 40 50 60 50 60 70 80 90 100 KIAA12 KEILRALKAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KEILRALKAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWV 70 80 90 100 110 120 110 120 130 140 150 160 KIAA12 QSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAK 130 140 150 160 170 180 170 180 190 200 210 220 KIAA12 MIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRD 190 200 210 220 230 240 230 240 250 260 270 280 KIAA12 VRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGI 250 260 270 280 290 300 290 300 310 320 330 340 KIAA12 DLLMKDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DLLMKDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVS 310 320 330 340 350 360 350 360 370 380 390 400 KIAA12 TASETSEPELGPPASTAVDNMSASSSSVDSDPESTERELLTKLPGGLFNMNQLLANEIKL ::::::::::::::::::::::::::::::::::::::::::::::.::::::.:::::: gi|739 TASETSEPELGPPASTAVDNMSASSSSVDSDPESTERELLTKLPGGVFNMNQLIANEIKL 370 380 390 400 410 420 KIAA12 LVD ::. gi|739 LVE >>gi|194211666|ref|XP_001916098.1| PREDICTED: hypothetic (386 aa) initn: 2554 init1: 2554 opt: 2554 Z-score: 3071.9 bits: 577.2 E(): 2.1e-162 Smith-Waterman score: 2554; 99.741% identity (100.000% similar) in 386 aa overlap (23-408:1-386) 10 20 30 40 50 60 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE :::::::::::::::::::::::::::::::::::::: gi|194 MCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE 10 20 30 70 80 90 100 110 120 KIAA12 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM 40 50 60 70 80 90 130 140 150 160 170 180 KIAA12 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA12 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML 160 170 180 190 200 210 250 260 270 280 290 300 KIAA12 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA 220 230 240 250 260 270 310 320 330 340 350 360 KIAA12 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS 280 290 300 310 320 330 370 380 390 400 KIAA12 TAVDNMSASSSSVDSDPESTERELLTKLPGGLFNMNQLLANEIKLLVD :::::::::::::::::::::::::::::::::::::::::::::::. gi|194 TAVDNMSASSSSVDSDPESTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|194037858|ref|XP_001927870.1| PREDICTED: hypothetic (386 aa) initn: 2550 init1: 2550 opt: 2550 Z-score: 3067.1 bits: 576.4 E(): 3.9e-162 Smith-Waterman score: 2550; 99.223% identity (100.000% similar) in 386 aa overlap (23-408:1-386) 10 20 30 40 50 60 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE :::::::::::::::::::::::::::::::::::::: gi|194 MCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE 10 20 30 70 80 90 100 110 120 KIAA12 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM 40 50 60 70 80 90 130 140 150 160 170 180 KIAA12 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA12 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|194 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVGGRVVGTML 160 170 180 190 200 210 250 260 270 280 290 300 KIAA12 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA 220 230 240 250 260 270 310 320 330 340 350 360 KIAA12 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS 280 290 300 310 320 330 370 380 390 400 KIAA12 TAVDNMSASSSSVDSDPESTERELLTKLPGGLFNMNQLLANEIKLLVD ::::::::::::::::::.::::::::::::::::::::::::::::. gi|194 TAVDNMSASSSSVDSDPETTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|122145573|sp|Q0VCE9.1|RIMKB_BOVIN RecName: Full=Rib (386 aa) initn: 2531 init1: 2531 opt: 2531 Z-score: 3044.2 bits: 572.1 E(): 7.3e-161 Smith-Waterman score: 2531; 98.446% identity (99.741% similar) in 386 aa overlap (23-408:1-386) 10 20 30 40 50 60 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE :::::::::::::::::::::::::::::::::::::: gi|122 MCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE 10 20 30 70 80 90 100 110 120 KIAA12 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM ::::::::::.:::.::::::::::::::::::::::::::::::::::::::::::::: gi|122 LDFRAVVMDELVLTVEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM 40 50 60 70 80 90 130 140 150 160 170 180 KIAA12 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA12 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML 160 170 180 190 200 210 250 260 270 280 290 300 KIAA12 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA 220 230 240 250 260 270 310 320 330 340 350 360 KIAA12 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :. gi|122 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPQAN 280 290 300 310 320 330 370 380 390 400 KIAA12 TAVDNMSASSSSVDSDPESTERELLTKLPGGLFNMNQLLANEIKLLVD ::::::::::::::::::.::::::::::::::::::::::::::::. gi|122 TAVDNMSASSSSVDSDPETTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|126340001|ref|XP_001368145.1| PREDICTED: similar to (386 aa) initn: 2529 init1: 2529 opt: 2529 Z-score: 3041.8 bits: 571.7 E(): 1e-160 Smith-Waterman score: 2529; 97.927% identity (99.741% similar) in 386 aa overlap (23-408:1-386) 10 20 30 40 50 60 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE :::::::.:::::::::::::::.:::::::::::::: gi|126 MCSSVAARLWFLTDRRIREDYPQQEILRALKAKCCEEE 10 20 30 70 80 90 100 110 120 KIAA12 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|126 LDFRAVVMDEVVLTVEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM 40 50 60 70 80 90 130 140 150 160 170 180 KIAA12 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA12 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML 160 170 180 190 200 210 250 260 270 280 290 300 KIAA12 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA 220 230 240 250 260 270 310 320 330 340 350 360 KIAA12 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS :::::::::::::::::::.:::::.:::: ::::::::::::::::::::::::::::: gi|126 NANVGFIAFDKACNLDVAGMIADYATSLLPPGRLTRRMSLLSVVSTASETSEPELGPPAS 280 290 300 310 320 330 370 380 390 400 KIAA12 TAVDNMSASSSSVDSDPESTERELLTKLPGGLFNMNQLLANEIKLLVD ::::::::::::::::::.::::::::::::::::::::::::::::. gi|126 TAVDNMSASSSSVDSDPETTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|109472534|ref|XP_342750.3| PREDICTED: hypothetical (387 aa) initn: 2521 init1: 2354 opt: 2509 Z-score: 3017.7 bits: 567.2 E(): 2.2e-159 Smith-Waterman score: 2509; 97.158% identity (99.742% similar) in 387 aa overlap (23-408:1-387) 10 20 30 40 50 60 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE :::::..::::::::::.:::::::::::::::::::: gi|109 MCSSVSGKLWFLTDRRIQEDYPQKEILRALKAKCCEEE 10 20 30 70 80 90 100 110 120 KIAA12 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM ::::::::::::::.::::::::::::::.:::::::::::::::::::::::::::::: gi|109 LDFRAVVMDEVVLTVEQGNLGLRINGELISAYPQVVVVRVPTPWVQSDSDITVLRHLEKM 40 50 60 70 80 90 130 140 150 160 170 180 KIAA12 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|109 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFSKMIDEAEVLEFPMVVK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA12 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|109 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVGGRVVGTML 160 170 180 190 200 210 250 260 270 280 290 300 KIAA12 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA 220 230 240 250 260 270 310 320 330 340 350 360 KIAA12 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|109 NANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSEPELGPPAS 280 290 300 310 320 330 370 380 390 400 KIAA12 TAVDNMSASSSSVDSDPEST-ERELLTKLPGGLFNMNQLLANEIKLLVD .::::::::::::::::::: :::::::::::::::::::::::::::. gi|109 AAVDNMSASSSSVDSDPESTTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|81895264|sp|Q80WS1.1|RIMKB_MOUSE RecName: Full=Ribo (387 aa) initn: 2509 init1: 2344 opt: 2498 Z-score: 3004.5 bits: 564.8 E(): 1.2e-158 Smith-Waterman score: 2498; 96.641% identity (99.483% similar) in 387 aa overlap (23-408:1-387) 10 20 30 40 50 60 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE :::::..::::::::::::::::::::::::::::::: gi|818 MCSSVTGKLWFLTDRRIREDYPQKEILRALKAKCCEEE 10 20 30 70 80 90 100 110 120 KIAA12 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM ::::::::::.:::.:::::::::.::::.:::::::::::::::::::::::::::::: gi|818 LDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDITVLRHLEKM 40 50 60 70 80 90 130 140 150 160 170 180 KIAA12 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA12 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|818 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVGGRVVGTML 160 170 180 190 200 210 250 260 270 280 290 300 KIAA12 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|818 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDDGSFCVCEA 220 230 240 250 260 270 310 320 330 340 350 360 KIAA12 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|818 NANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSEPELGPPAS 280 290 300 310 320 330 370 380 390 400 KIAA12 TAVDNMSASSSSVDSDPEST-ERELLTKLPGGLFNMNQLLANEIKLLVD .::::::::::::::::::: :::.:::::::::::::::::::::::. gi|818 AAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|26333243|dbj|BAC30339.1| unnamed protein product [M (330 aa) initn: 2143 init1: 1978 opt: 2132 Z-score: 2565.3 bits: 483.3 E(): 3.5e-134 Smith-Waterman score: 2132; 96.970% identity (99.394% similar) in 330 aa overlap (80-408:1-330) 50 60 70 80 90 100 KIAA12 RALKAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDS .::::.::::.::::::::::::::::::: gi|263 MGLRISGELISAYPQVVVVRVPTPWVQSDS 10 20 30 110 120 130 140 150 160 KIAA12 DITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDE 40 50 60 70 80 90 170 180 190 200 210 220 KIAA12 AEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVI ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|263 AEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVI 100 110 120 130 140 150 230 240 250 260 270 280 KIAA12 VVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLM :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|263 VVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLM 160 170 180 190 200 210 290 300 310 320 330 340 KIAA12 KDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASE :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|263 KDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASE 220 230 240 250 260 270 350 360 370 380 390 400 KIAA12 TSEPELGPPASTAVDNMSASSSSVDSDPEST-ERELLTKLPGGLFNMNQLLANEIKLLVD :::::::::::.::::::::::::::::::: :::.:::::::::::::::::::::::. gi|263 TSEPELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE 280 290 300 310 320 330 >>gi|119609015|gb|EAW88609.1| family with sequence simil (307 aa) initn: 1910 init1: 1910 opt: 1910 Z-score: 2298.8 bits: 433.9 E(): 2.4e-119 Smith-Waterman score: 1910; 100.000% identity (100.000% similar) in 281 aa overlap (23-303:1-281) 10 20 30 40 50 60 KIAA12 SKEGRRYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE :::::::::::::::::::::::::::::::::::::: gi|119 MCSSVAAKLWFLTDRRIREDYPQKEILRALKAKCCEEE 10 20 30 70 80 90 100 110 120 KIAA12 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKM 40 50 60 70 80 90 130 140 150 160 170 180 KIAA12 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEVLEFPMVVK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA12 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVGGRVVGTML 160 170 180 190 200 210 250 260 270 280 290 300 KIAA12 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDDGSFCVCEA 220 230 240 250 260 270 310 320 330 340 350 360 KIAA12 NANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSEPELGPPAS ::: gi|119 NANPFQEPKKQIQTNKKIPREKTFLLPPS 280 290 300 408 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 04:57:50 2009 done: Wed Mar 4 05:02:38 2009 Total Scan time: 1518.790 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]