# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fg03361.fasta.nr -Q ../query/KIAA1203.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1203, 727 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7803493 sequences Expectation_n fit: rho(ln(x))= 6.1719+/-0.000208; mu= 8.8441+/- 0.011 mean_var=156.4249+/-29.378, 0's: 29 Z-trim: 86 B-trim: 0 in 0/66 Lambda= 0.102547 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119576240|gb|EAW55836.1| ubiquitin specific pep ( 909) 4753 715.8 1.7e-203 gi|119576239|gb|EAW55835.1| ubiquitin specific pep (1100) 4753 715.9 1.9e-203 gi|40788185|emb|CAE51935.2| ubiquitin-specific pro (1352) 4753 716.0 2.2e-203 gi|134047944|sp|Q70CQ4.2|UBP31_HUMAN RecName: Full (1352) 4753 716.0 2.2e-203 gi|109127891|ref|XP_001087999.1| PREDICTED: simila (1293) 4643 699.7 1.7e-198 gi|194219144|ref|XP_001498764.2| PREDICTED: ubiqui (1317) 4415 666.0 2.4e-188 gi|73958749|ref|XP_547094.2| PREDICTED: similar to (1250) 4405 664.5 6.6e-188 gi|149068029|gb|EDM17581.1| ubiquitin specific pro (1089) 4283 646.4 1.6e-182 gi|148685303|gb|EDL17250.1| mCG67204 [Mus musculus (1211) 4238 639.8 1.8e-180 gi|82907597|ref|XP_357781.3| PREDICTED: ubiquitin (1344) 4238 639.8 1.9e-180 gi|126334974|ref|XP_001377884.1| PREDICTED: simila (1382) 3885 587.6 1e-164 gi|193787404|dbj|BAG52610.1| unnamed protein produ ( 645) 3657 553.5 8.9e-155 gi|149632234|ref|XP_001509900.1| PREDICTED: simila (1226) 3660 554.3 9.8e-155 gi|34532933|dbj|BAC86554.1| unnamed protein produc ( 443) 2414 369.4 1.6e-99 gi|189517300|ref|XP_692912.3| PREDICTED: similar t (1295) 1811 280.8 2.3e-72 gi|47225944|emb|CAG04318.1| unnamed protein produc ( 850) 1689 262.5 4.7e-67 gi|47220072|emb|CAG12220.1| unnamed protein produc ( 890) 1161 184.4 1.6e-43 gi|126632447|emb|CAM56644.1| novel protein similar (1122) 927 149.9 4.8e-33 gi|148678491|gb|EDL10438.1| ubiquitin specific pep (1018) 866 140.8 2.4e-30 gi|26350395|dbj|BAC38837.1| unnamed protein produc (1021) 866 140.8 2.4e-30 gi|148678492|gb|EDL10439.1| ubiquitin specific pep (1032) 866 140.8 2.4e-30 gi|115311887|sp|Q8BUM9.2|UBP43_MOUSE RecName: Full (1132) 866 140.9 2.5e-30 gi|18204471|gb|AAH21474.1| Usp43 protein [Mus musc ( 826) 864 140.4 2.5e-30 gi|119911941|ref|XP_583534.3| PREDICTED: similar t (1121) 864 140.6 3.1e-30 gi|194217681|ref|XP_001918201.1| PREDICTED: simila (1230) 847 138.1 1.9e-29 gi|149052981|gb|EDM04798.1| ubiquitin specific pro (1039) 839 136.8 3.8e-29 gi|119610428|gb|EAW90022.1| hCG57025, isoform CRA_ ( 812) 827 134.9 1.1e-28 gi|119610427|gb|EAW90021.1| hCG57025, isoform CRA_ ( 891) 827 135.0 1.2e-28 gi|114669225|ref|XP_511843.2| PREDICTED: ubiquitin (1810) 830 135.8 1.4e-28 gi|219518109|gb|AAI44042.1| Ubiquitin specific pep (1123) 827 135.1 1.4e-28 gi|74723116|sp|Q70EL4.1|UBP43_HUMAN RecName: Full= (1124) 827 135.1 1.4e-28 gi|109113333|ref|XP_001118238.1| PREDICTED: simila (1783) 818 134.0 4.6e-28 gi|73955906|ref|XP_546616.2| PREDICTED: similar to (1104) 813 133.0 5.7e-28 gi|119610429|gb|EAW90023.1| hCG57025, isoform CRA_ ( 551) 807 131.8 6.8e-28 gi|151357810|emb|CAO77889.1| ubiquitin specific pe (1127) 807 132.1 1.1e-27 gi|189517011|ref|XP_001920291.1| PREDICTED: simila (1163) 807 132.2 1.1e-27 gi|219521674|gb|AAI71759.1| USP43 protein [Homo sa (1118) 768 126.4 5.8e-26 gi|50949625|emb|CAH10383.1| hypothetical protein [ ( 171) 598 100.2 6.6e-19 gi|210126309|gb|EEA73997.1| hypothetical protein B ( 922) 604 102.0 1e-18 gi|47210314|emb|CAF91625.1| unnamed protein produc ( 163) 582 97.8 3.3e-18 gi|212512845|gb|EEB15533.1| ubiquitin specific pro ( 954) 557 95.1 1.3e-16 gi|198421507|ref|XP_002120550.1| PREDICTED: simila ( 830) 533 91.4 1.4e-15 gi|91088095|ref|XP_969130.1| PREDICTED: similar to ( 859) 508 87.8 1.9e-14 gi|70905643|gb|AAZ14282.1| proteophosphoglycan ppg (2425) 505 87.9 4.9e-14 gi|134065504|emb|CAM43271.1| proteophosphoglycan p (5384) 489 85.9 4.2e-13 gi|70905641|gb|AAZ14280.1| proteophosphoglycan ppg (7194) 488 85.9 5.6e-13 gi|134065503|emb|CAM43270.1| proteophosphoglycan p (4324) 482 84.8 7.4e-13 gi|70905642|gb|AAZ14281.1| proteophosphoglycan 5 [ (17392) 486 86.1 1.2e-12 gi|47213873|emb|CAF94023.1| unnamed protein produc ( 558) 455 79.7 3.2e-12 gi|190587907|gb|EDV27949.1| hypothetical protein T ( 921) 454 79.8 4.9e-12 >>gi|119576240|gb|EAW55836.1| ubiquitin specific peptida (909 aa) initn: 4753 init1: 4753 opt: 4753 Z-score: 3809.6 bits: 715.8 E(): 1.7e-203 Smith-Waterman score: 4753; 100.000% identity (100.000% similar) in 727 aa overlap (1-727:183-909) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|119 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 160 170 180 190 200 210 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 220 230 240 250 260 270 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 280 290 300 310 320 330 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 340 350 360 370 380 390 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST 400 410 420 430 440 450 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT 460 470 480 490 500 510 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL 520 530 540 550 560 570 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS 580 590 600 610 620 630 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG 640 650 660 670 680 690 520 530 540 550 560 570 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH 700 710 720 730 740 750 580 590 600 610 620 630 KIAA12 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG 760 770 780 790 800 810 640 650 660 670 680 690 KIAA12 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ 820 830 840 850 860 870 700 710 720 KIAA12 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::::::::::::::::::::::::::::::::: gi|119 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ 880 890 900 >>gi|119576239|gb|EAW55835.1| ubiquitin specific peptida (1100 aa) initn: 4753 init1: 4753 opt: 4753 Z-score: 3808.6 bits: 715.9 E(): 1.9e-203 Smith-Waterman score: 4753; 100.000% identity (100.000% similar) in 727 aa overlap (1-727:374-1100) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|119 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 350 360 370 380 390 400 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 410 420 430 440 450 460 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 470 480 490 500 510 520 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 530 540 550 560 570 580 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST 590 600 610 620 630 640 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT 650 660 670 680 690 700 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL 710 720 730 740 750 760 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS 770 780 790 800 810 820 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG 830 840 850 860 870 880 520 530 540 550 560 570 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH 890 900 910 920 930 940 580 590 600 610 620 630 KIAA12 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG 950 960 970 980 990 1000 640 650 660 670 680 690 KIAA12 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ 1010 1020 1030 1040 1050 1060 700 710 720 KIAA12 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::::::::::::::::::::::::::::::::: gi|119 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ 1070 1080 1090 1100 >>gi|40788185|emb|CAE51935.2| ubiquitin-specific protein (1352 aa) initn: 4753 init1: 4753 opt: 4753 Z-score: 3807.6 bits: 716.0 E(): 2.2e-203 Smith-Waterman score: 4753; 100.000% identity (100.000% similar) in 727 aa overlap (1-727:626-1352) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|407 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 600 610 620 630 640 650 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 660 670 680 690 700 710 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 720 730 740 750 760 770 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 780 790 800 810 820 830 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST 840 850 860 870 880 890 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT 900 910 920 930 940 950 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL 960 970 980 990 1000 1010 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS 1020 1030 1040 1050 1060 1070 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG 1080 1090 1100 1110 1120 1130 520 530 540 550 560 570 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH 1140 1150 1160 1170 1180 1190 580 590 600 610 620 630 KIAA12 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG 1200 1210 1220 1230 1240 1250 640 650 660 670 680 690 KIAA12 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ 1260 1270 1280 1290 1300 1310 700 710 720 KIAA12 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::::::::::::::::::::::::::::::::: gi|407 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ 1320 1330 1340 1350 >>gi|134047944|sp|Q70CQ4.2|UBP31_HUMAN RecName: Full=Ubi (1352 aa) initn: 4753 init1: 4753 opt: 4753 Z-score: 3807.6 bits: 716.0 E(): 2.2e-203 Smith-Waterman score: 4753; 100.000% identity (100.000% similar) in 727 aa overlap (1-727:626-1352) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|134 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 600 610 620 630 640 650 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 660 670 680 690 700 710 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 720 730 740 750 760 770 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 780 790 800 810 820 830 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST 840 850 860 870 880 890 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT 900 910 920 930 940 950 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL 960 970 980 990 1000 1010 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS 1020 1030 1040 1050 1060 1070 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG 1080 1090 1100 1110 1120 1130 520 530 540 550 560 570 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH 1140 1150 1160 1170 1180 1190 580 590 600 610 620 630 KIAA12 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG 1200 1210 1220 1230 1240 1250 640 650 660 670 680 690 KIAA12 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ 1260 1270 1280 1290 1300 1310 700 710 720 KIAA12 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::::::::::::::::::::::::::::::::: gi|134 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ 1320 1330 1340 1350 >>gi|109127891|ref|XP_001087999.1| PREDICTED: similar to (1293 aa) initn: 3125 init1: 3125 opt: 4643 Z-score: 3719.9 bits: 699.7 E(): 1.7e-198 Smith-Waterman score: 4643; 97.119% identity (99.314% similar) in 729 aa overlap (1-727:565-1293) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|109 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 540 550 560 570 580 590 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 600 610 620 630 640 650 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 660 670 680 690 700 710 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 720 730 740 750 760 770 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST 780 790 800 810 820 830 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|109 LEKIGEAADDKVSISCFGSLRNLSNSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT 840 850 860 870 880 890 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL :::::::.:::::::::::::::.: ::::::::::::::::::.::::::: ::::::: gi|109 RRLNSSVIDTQSKHSAQGDRLPPVSDPFDNNNQIAYVDQSDSVDNSPVKEVKPPSHPGSL 900 910 920 930 940 950 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS .::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TKKPESTTKKSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS 960 970 980 990 1000 1010 460 470 480 490 500 KIAA12 KADSSSRGSGRHSSPAPA--QPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKA :::::::::::::::::: ::.::::::::::::::::::::::::::::::: ::::: gi|109 KADSSSRGSGRHSSPAPAPAQPRKESSPKSQDSVSSPSPQKQKSASALTYTASSMSAKKA 1020 1030 1040 1050 1060 1070 510 520 530 540 550 560 KIAA12 SGPATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAG ::::::::::::::::::.::::::::::::::::::::.:::::::::::::::::::: gi|109 SGPATRSPFPPGKSRTSDRSLSREGSRQSLGSDRASATSASKPNSPRVSQARAGEGRGAG 1080 1090 1100 1110 1120 1130 570 580 590 600 610 620 KIAA12 KHVRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKK :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|109 KHVRSSSMASLRSPSASIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKK 1140 1150 1160 1170 1180 1190 630 640 650 660 670 680 KIAA12 AGGSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKS ::::::::::::::::..:.:::::::::::::.:::::::.:::::::::::::::::: gi|109 AGGSSVKSVCKNTGDDKGEKGHQPPASQQPNANATGKEQLVSKDPASAKHSLLSARKSKS 1200 1210 1220 1230 1240 1250 690 700 710 720 KIAA12 SQLDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::::::::.:::::::::::::::::::::::::: gi|109 SQLDSGVPSSPGSRQSAEKSSKKLSSSMQTSARPSQKPQ 1260 1270 1280 1290 >>gi|194219144|ref|XP_001498764.2| PREDICTED: ubiquitin (1317 aa) initn: 4415 init1: 4415 opt: 4415 Z-score: 3537.5 bits: 666.0 E(): 2.4e-188 Smith-Waterman score: 4415; 91.884% identity (98.487% similar) in 727 aa overlap (1-727:591-1317) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|194 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 570 580 590 600 610 620 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 630 640 650 660 670 680 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::.:::::::::::::::::: :::.::::::::::::::::::::::::: gi|194 HGTMQGGHYTAHCKNSVDGLWYCFDDSDVQPLSEEEVCTQTAYILFYQRRTAIPSWSANS 690 700 710 720 730 740 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|194 SVAGSTSSSLCEHWVSRLPGSKQASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 750 760 770 780 790 800 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST :::::::::::::::::::::::.:::.:::::::::::::::::::::::::::.:::: gi|194 PFVRSVQRQSLSSRSSVTSPLAVTENCIRPSWSLSAKLQMRSNSPSRFSGDSPIHTSAST 810 820 830 840 850 860 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT :::::::.:::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|194 LEKIGEAVDDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMESVFKDESDT 870 880 890 900 910 920 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL :.:::::::.:::.::::::.::.: :::::::::::::::::::::::::: ::::::: gi|194 RKLNSSVVDAQSKNSAQGDRVPPISDPFDNNNQIAYVDQSDSVDSSPVKEVKPPSHPGSL 930 940 950 960 970 980 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS .:::::::::::::::.:::....:::::.::::::::::::::::.:::::.::::::: gi|194 TKKPESTTKRSPSSKGASEPDRGVRKGRPVLASQESSLSSTSPSSPVPVKVSVKPSRSRS 990 1000 1010 1020 1030 1040 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG :::::::.:::::::.::::::::::: :::.::::::::::: ::: :.:::::::::: gi|194 KADSSSRASGRHSSPVPAQPKKESSPKCQDSASSPSPQKQKSAPALTCTVSSTSAKKASG 1050 1060 1070 1080 1090 1100 520 530 540 550 560 570 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH ::.:.::::::.::::.:::::::::::.::::: .:.::::::::::::.::::: ::: gi|194 PASRGPFPPGKGRTSDRSLSREGSRQSLASDRASIASSSKPNSPRVSQARVGEGRGDGKH 1110 1120 1130 1140 1150 1160 580 590 600 610 620 630 KIAA12 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG ::::::::::::.::.:.::::::::::::::::::::::::::::::::::.::::::. gi|194 VRSSSMASLRSPNTSMKAGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTTLLSKKAS 1170 1180 1190 1200 1210 1220 640 650 660 670 680 690 KIAA12 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ ::::::.:::. ::.::.:.: :.::::.::..::::::.:::::::::::::::::::: gi|194 GSSVKSACKNAMDDKAEKGYQAPGSQQPSANAVGKEQLVSKDPASAKHSLLSARKSKSSQ 1230 1240 1250 1260 1270 1280 700 710 720 KIAA12 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::::::::::::::::::::::::::::::::: gi|194 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ 1290 1300 1310 >>gi|73958749|ref|XP_547094.2| PREDICTED: similar to ubi (1250 aa) initn: 4405 init1: 4405 opt: 4405 Z-score: 3529.8 bits: 664.5 E(): 6.6e-188 Smith-Waterman score: 4405; 91.472% identity (98.349% similar) in 727 aa overlap (1-727:524-1250) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|739 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 500 510 520 530 540 550 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|739 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYVYDLYAVCNH 560 570 580 590 600 610 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 620 630 640 650 660 670 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::: :::::::::::::::::::::::.::::::::::::: gi|739 SVAGSTSSSLCEHWVSRLPGSKQASVTSAASSRRTSLASLSESVEMAGERSEDDGGFSTR 680 690 700 710 720 730 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST ::::::::::::::::::::::::.::.:::::::::::::::::::::::::::.:::: gi|739 PFVRSVQRQSLSSRSSVTSPLAVNDNCIRPSWSLSAKLQMRSNSPSRFSGDSPIHTSAST 740 750 760 770 780 790 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT :::::::.::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|739 LEKIGEAVDDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFRDESDT 800 810 820 830 840 850 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL :.::::.::::::.::::::.::.: :::::::::::::::::::::::::: :::::: gi|739 RKLNSSIVDTQSKNSAQGDRVPPISDPFDNNNQIAYVDQSDSVDSSPVKEVKPTSHPGSL 860 870 880 890 900 910 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS .:::.::.::::::::.:::..:::::::.::::::::::::::::.:::::.::::::: gi|739 TKKPDSTAKRSPSSKGASEPDRSLRKGRPVLASQESSLSSTSPSSPVPVKVSVKPSRSRS 920 930 940 950 960 970 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG :::::::.:::::::::.: .:::::: ::::::::::.:::.:.::::::::::::::: gi|739 KADSSSRASGRHSSPAPGQSRKESSPKPQDSVSSPSPQRQKSSSSLTYTASSTSAKKASG 980 990 1000 1010 1020 1030 520 530 540 550 560 570 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH ::.:.::::::::.::.:::::::::::.:::::.::.:::::::::::::::::: ::: gi|739 PAARGPFPPGKSRNSDRSLSREGSRQSLASDRASVTSSSKPNSPRVSQARAGEGRGDGKH 1040 1050 1060 1070 1080 1090 580 590 600 610 620 630 KIAA12 VRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAG :::::::::::::::.:.::::::::::::::::::::::::::::::::::.:::::.. gi|739 VRSSSMASLRSPSTSMKAGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTTLLSKKVA 1100 1110 1120 1130 1140 1150 640 650 660 670 680 690 KIAA12 GSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQ ::::: . :. ::.::.:.: :..:::::.:.::::.:.:::::::::::::::::::: gi|739 GSSVKLAGKSGMDDKAEKGYQSPGAQQPNASTVGKEQFVSKDPASAKHSLLSARKSKSSQ 1160 1170 1180 1190 1200 1210 700 710 720 KIAA12 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::::::::::::::::::::::::::::::::: gi|739 LDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ 1220 1230 1240 1250 >>gi|149068029|gb|EDM17581.1| ubiquitin specific proteas (1089 aa) initn: 2932 init1: 2880 opt: 4283 Z-score: 3432.9 bits: 646.4 E(): 1.6e-182 Smith-Waterman score: 4283; 89.438% identity (96.845% similar) in 729 aa overlap (1-727:362-1089) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|149 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 340 350 360 370 380 390 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 400 410 420 430 440 450 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 460 470 480 490 500 510 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|149 SVAGSTSSSLCEHWVSRLPGSKQASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 520 530 540 550 560 570 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|149 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHGSAST 580 590 600 610 620 630 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT ::.::::.::::::::::::::::.:.::::::::::::::.::::::::::::::.::. gi|149 LERIGEAGDDKVSISCFGSLRNLSGSHQEPSDSHSRREHKAAGRAPLAVMEGVFKDDSDS 640 650 660 670 680 690 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL .:::::::: ::. ::::.:::.: ::::::::::::::::::::::::::.::: :: gi|149 GKLNSSVVDTPSKNRAQGDHLPPVSDPFDNNNQIAYVDQSDSVDSSPVKEVKSPSHSDSL 700 710 720 730 740 750 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS .:::::::::::::::.::::::.:::::::::::::::: :::::.:::::.::.: :: gi|149 TKKPESTTKRSPSSKGASEPEKSMRKGRPALASQESSLSSPSPSSPVPVKVSMKPARCRS 760 770 780 790 800 810 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG ::::: : :::::: : .::::::::.::.:.:::::::::::::.::..:: ::: : : gi|149 KADSS-RTSGRHSSSASTQPKKESSPRSQESMSSPSPQKQKSASAFTYSSSSISAKTAPG 820 830 840 850 860 870 520 530 540 550 560 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRAS--ATSTSKPNSPRVSQARAGEGRGAG ::::.:.: :::::::.::::.:::::::::::: .::::::.::::.:::::..: : gi|149 PATRGPLPSGKSRTSDRSLSRQGSRQSLGSDRASVTSTSTSKPSSPRVNQARAGDSRVDG 880 890 900 910 920 930 570 580 590 600 610 620 KIAA12 KHVRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKK :::::::::::::::::..:::::::::::::::::::::::::::::::::::.::::: gi|149 KHVRSSSMASLRSPSTSVRSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTTLLSKK 940 950 960 970 980 990 630 640 650 660 670 680 KIAA12 AGGSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKS ::::::::: :::.::.::.:::::.:::::.:::::::::.::::::::::::::.::: gi|149 AGGSSVKSVSKNTADDKAEKGHQPPGSQQPNTNTTGKEQLVSKDPASAKHSLLSARRSKS 1000 1010 1020 1030 1040 1050 690 700 710 720 KIAA12 SQLDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::.:::.: ::..:...::.:::::::::::::::.::: gi|149 SQVDSGAPLSPSSRSTTEKGSKKLSSSMQTSARPSHKPQ 1060 1070 1080 >>gi|148685303|gb|EDL17250.1| mCG67204 [Mus musculus] (1211 aa) initn: 2871 init1: 2871 opt: 4238 Z-score: 3396.4 bits: 639.8 E(): 1.8e-180 Smith-Waterman score: 4238; 88.752% identity (96.296% similar) in 729 aa overlap (1-727:486-1211) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|148 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 460 470 480 490 500 510 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 520 530 540 550 560 570 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 580 590 600 610 620 630 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|148 SVAGSTSSSLCEHWVSRLPGSKQASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 640 650 660 670 680 690 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST ::::::::::::::::::::::::::::::::::::::::::.::::::::::::.:::: gi|148 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSSSPSRFSGDSPIHGSAST 700 710 720 730 740 750 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT ::.::::.::::::::::::::::.:.:::::::.:::::::::::::::::::::.:: gi|148 LERIGEAGDDKVSISCFGSLRNLSGSHQEPSDSHNRREHKAVGRAPLAVMEGVFKDDSDP 760 770 780 790 800 810 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL .:::::::: ::. ::::.:::.: :::::::::::::::::::::::::: ::: :: gi|148 GKLNSSVVDTPSKNRAQGDHLPPVSDPFDNNNQIAYVDQSDSVDSSPVKEVKPPSHSDSL 820 830 840 850 860 870 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS .:::::::: ::::::::::::..:::::::::::::::: :::::.:::::.::.: :: gi|148 TKKPESTTKSSPSSKGTSEPEKNMRKGRPALASQESSLSSPSPSSPVPVKVSMKPARCRS 880 890 900 910 920 930 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG ::::: : :::::: . .::::::::.::.:.:::::::::::::.::..:: ::::: . gi|148 KADSS-RTSGRHSSSSSTQPKKESSPRSQESMSSPSPQKQKSASAFTYSSSSISAKKAPS 940 950 960 970 980 990 520 530 540 550 560 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRAS--ATSTSKPNSPRVSQARAGEGRGAG :.::.::: :::::::.::::::::::::::::: .::::::.::::.:::::..: : gi|148 PVTRGPFPSGKSRTSDRSLSREGSRQSLGSDRASVTSTSTSKPSSPRVNQARAGDNRVDG 1000 1010 1020 1030 1040 1050 570 580 590 600 610 620 KIAA12 KHVRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKK :::::::::::::::::..:::::::::::::::::::::::::::::::::::.::::: gi|148 KHVRSSSMASLRSPSTSVRSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTTLLSKK 1060 1070 1080 1090 1100 1110 630 640 650 660 670 680 KIAA12 AGGSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKS ::::::::: :::.::..:.:::::.:::::.:..::::::.::: :::::::::.::: gi|148 AGGSSVKSVSKNTADDKTEKGHQPPGSQQPNTNAVGKEQLVSKDP--AKHSLLSARRSKS 1120 1130 1140 1150 1160 1170 690 700 710 720 KIAA12 SQLDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::.: ::..:...::.::::::::::::::::::: gi|148 SQLDSGAPLSPSSRSTTEKGSKKLSSSMQTSARPSQKPQ 1180 1190 1200 1210 >>gi|82907597|ref|XP_357781.3| PREDICTED: ubiquitin spec (1344 aa) initn: 2871 init1: 2871 opt: 4238 Z-score: 3395.9 bits: 639.8 E(): 1.9e-180 Smith-Waterman score: 4238; 88.752% identity (96.296% similar) in 729 aa overlap (1-727:619-1344) 10 20 30 KIAA12 QQGSITLSLWTLPDVLIIHLKRFRQEGDRR :::::::::::::::::::::::::::::: gi|829 CTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRR 590 600 610 620 630 640 40 50 60 70 80 90 KIAA12 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|829 MKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNH 650 660 670 680 690 700 100 110 120 130 140 150 KIAA12 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|829 HGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPSWSANS 710 720 730 740 750 760 160 170 180 190 200 210 KIAA12 SVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|829 SVAGSTSSSLCEHWVSRLPGSKQASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTR 770 780 790 800 810 820 220 230 240 250 260 270 KIAA12 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSAST ::::::::::::::::::::::::::::::::::::::::::.::::::::::::.:::: gi|829 PFVRSVQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSSSPSRFSGDSPIHGSAST 830 840 850 860 870 880 280 290 300 310 320 330 KIAA12 LEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDT ::.::::.::::::::::::::::.:.:::::::.:::::::::::::::::::::.:: gi|829 LERIGEAGDDKVSISCFGSLRNLSGSHQEPSDSHNRREHKAVGRAPLAVMEGVFKDDSDP 890 900 910 920 930 940 340 350 360 370 380 390 KIAA12 RRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSL .:::::::: ::. ::::.:::.: :::::::::::::::::::::::::: ::: :: gi|829 GKLNSSVVDTPSKNRAQGDHLPPVSDPFDNNNQIAYVDQSDSVDSSPVKEVKPPSHSDSL 950 960 970 980 990 1000 400 410 420 430 440 450 KIAA12 AKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKPSRSRS .:::::::: ::::::::::::..:::::::::::::::: :::::.:::::.::.: :: gi|829 TKKPESTTKSSPSSKGTSEPEKNMRKGRPALASQESSLSSPSPSSPVPVKVSMKPARCRS 1010 1020 1030 1040 1050 1060 460 470 480 490 500 510 KIAA12 KADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASG ::::: : :::::: . .::::::::.::.:.:::::::::::::.::..:: ::::: . gi|829 KADSS-RTSGRHSSSSSTQPKKESSPRSQESMSSPSPQKQKSASAFTYSSSSISAKKAPS 1070 1080 1090 1100 1110 1120 520 530 540 550 560 KIAA12 PATRSPFPPGKSRTSDHSLSREGSRQSLGSDRAS--ATSTSKPNSPRVSQARAGEGRGAG :.::.::: :::::::.::::::::::::::::: .::::::.::::.:::::..: : gi|829 PVTRGPFPSGKSRTSDRSLSREGSRQSLGSDRASVTSTSTSKPSSPRVNQARAGDNRVDG 1130 1140 1150 1160 1170 1180 570 580 590 600 610 620 KIAA12 KHVRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKK :::::::::::::::::..:::::::::::::::::::::::::::::::::::.::::: gi|829 KHVRSSSMASLRSPSTSVRSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTTLLSKK 1190 1200 1210 1220 1230 1240 630 640 650 660 670 680 KIAA12 AGGSSVKSVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKS ::::::::: :::.::..:.:::::.:::::.:..::::::.::: :::::::::.::: gi|829 AGGSSVKSVSKNTADDKTEKGHQPPGSQQPNTNAVGKEQLVSKDP--AKHSLLSARRSKS 1250 1260 1270 1280 1290 1300 690 700 710 720 KIAA12 SQLDSGVPSSPGGRQSAEKSSKKLSSSMQTSARPSQKPQ ::::::.: ::..:...::.::::::::::::::::::: gi|829 SQLDSGAPLSPSSRSTTEKGSKKLSSSMQTSARPSQKPQ 1310 1320 1330 1340 727 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 02:39:58 2009 done: Wed Mar 4 02:43:40 2009 Total Scan time: 1592.720 Total Display time: 0.500 Function used was FASTA [version 34.26.5 April 26, 2007]