hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19375331/chunk_1/iprscan-20080501-19375331.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1181
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07970.2.ls Protein of unknown function (DUF1692)          321.0      2e-93   1
PF07970.2.fs Protein of unknown function (DUF1692)          319.1      7e-93   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07970.2.fs   1/1     131   333 ..     1   241 []   319.1    7e-93
PF07970.2.ls   1/1     131   333 ..     1   241 []   321.0    2e-93

Alignments of top-scoring domains:
PF07970.2.fs: domain 1 of 1, from 131 to 333: score 319.1, E = 7e-93
                   *->kdddgklieqckregfveklkkqkesne.GCRiyGtleVNKVaGnFH
                      ++ d++++++++++g++++ +k + +n+ GCR++G++++NKV+GnFH
    KIAA1181   131    VGLDIQDEMGRHEVGHIDNSMKIPLNNGaGCRFEGQFSINKVPGNFH 177  

                   iaPGssfhqsrihvHdlslyksysnlNfsHvInhLSFGkrvsppldgdvk
                   ++++s++ q+             +n +++HvI++LSFG          ++
    KIAA1181   178 VSTHSATAQP-------------QNPDMTHVIHKLSFG----------DT 204  

                   klldyppgivnPLDGtskitprrdehlvtyqYflKvVPTeyedlsskgev
                    ++++ +g +n+L G  + t   +++l ++ Y+lK+VPT+yed s  g++
    KIAA1181   205 LQVQNIHGAFNALGGADRLT---SNPLASHDYILKIVPTVYEDKS--GKQ 249  

                   ieTnQYSVTeHerplqggrdedHpnTvhfrGGlPGvFFkYelSPlkViit
                    +++QY+V ++e++++++++++          +P+++F Y+lSP++V++t
    KIAA1181   250 RYSYQYTVANKEYVAYSHTGRI----------IPAIWFRYDLSPITVKYT 289  

                   EerrstFshFltnlCAIIGGvftVAGilDriiyhaqraikkkklg<-*
                   E+r++ ++ F+t +CAIIGG+ftVAGilD++i++a++a+kk++lg   
    KIAA1181   290 ERRQP-LYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLG    333  

PF07970.2.ls: domain 1 of 1, from 131 to 333: score 321.0, E = 2e-93
                   *->kdddgklieqckregfveklkkqkesne.GCRiyGtleVNKVaGnFH
                      ++ d++++++++++g++++ +k + +n+ GCR++G++++NKV+GnFH
    KIAA1181   131    VGLDIQDEMGRHEVGHIDNSMKIPLNNGaGCRFEGQFSINKVPGNFH 177  

                   iaPGssfhqsrihvHdlslyksysnlNfsHvInhLSFGkrvsppldgdvk
                   ++++s++ q+             +n +++HvI++LSFG          ++
    KIAA1181   178 VSTHSATAQP-------------QNPDMTHVIHKLSFG----------DT 204  

                   klldyppgivnPLDGtskitprrdehlvtyqYflKvVPTeyedlsskgev
                    ++++ +g +n+L G  + t   +++l ++ Y+lK+VPT+yed s  g++
    KIAA1181   205 LQVQNIHGAFNALGGADRLT---SNPLASHDYILKIVPTVYEDKS--GKQ 249  

                   ieTnQYSVTeHerplqggrdedHpnTvhfrGGlPGvFFkYelSPlkViit
                    +++QY+V ++e++++++++++          +P+++F Y+lSP++V++t
    KIAA1181   250 RYSYQYTVANKEYVAYSHTGRI----------IPAIWFRYDLSPITVKYT 289  

                   EerrstFshFltnlCAIIGGvftVAGilDriiyhaqraikkkklg<-*
                   E+r++ ++ F+t +CAIIGG+ftVAGilD++i++a++a+kk++lg   
    KIAA1181   290 ERRQP-LYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLG    333  

//