hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19311614/chunk_1/iprscan-20080501-19311614.nocrc
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Query sequence: KIAA1177
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07719.7.fs Tetratricopeptide repeat                        44.6    1.8e-11   4
PF07719.7.ls Tetratricopeptide repeat                        45.2      2e-10   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07719.7.ls   1/4     156   189 ..     1    34 []    22.4   0.0015

Alignments of top-scoring domains:
PF07719.7.ls: domain 1 of 4, from 156 to 189: score 22.4, E = 0.0015
                   *->aealynlGlayyklgdyeeAleayekAleldPnn<-*
                       ++++ l++ y++ g++e+A++ ye+A++   +    
    KIAA1177   156    GKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTV    189  

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