# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hf00837a.fasta.nr -Q ../query/KIAA1177.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1177, 755 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826607 sequences Expectation_n fit: rho(ln(x))= 5.3102+/-0.000185; mu= 11.9983+/- 0.010 mean_var=76.7978+/-14.866, 0's: 50 Z-trim: 52 B-trim: 0 in 0/66 Lambda= 0.146352 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|25091548|sp|Q9HCS7.2|SYF1_HUMAN RecName: Full=P ( 855) 5017 1069.3 0 gi|10566459|dbj|BAB15807.1| XAB2 [Homo sapiens] ( 855) 5015 1068.9 0 gi|33339562|gb|AAQ14304.1|AF272147_1 crn-related p ( 852) 5011 1068.1 0 gi|25091510|sp|Q99PK0.1|SYF1_RAT RecName: Full=Pre ( 855) 4984 1062.4 0 gi|25091545|sp|Q9DCD2.1|SYF1_MOUSE RecName: Full=P ( 855) 4984 1062.4 0 gi|18204681|gb|AAH21341.1| XPA binding protein 2 [ ( 855) 4979 1061.3 0 gi|109123174|ref|XP_001090436.1| PREDICTED: XPA bi ( 858) 4979 1061.3 0 gi|133777470|gb|AAI14737.1| XPA binding protein 2 ( 855) 4973 1060.0 0 gi|73986874|ref|XP_542113.2| PREDICTED: similar to ( 852) 4972 1059.8 0 gi|74219245|dbj|BAE26756.1| unnamed protein produc ( 855) 4964 1058.1 0 gi|110665580|gb|ABG81436.1| XPA binding protein 2 ( 855) 4962 1057.7 0 gi|149015558|gb|EDL74939.1| XPA binding protein 2, ( 750) 4951 1055.4 0 gi|73986876|ref|XP_868258.1| PREDICTED: similar to ( 854) 4891 1042.7 0 gi|126323885|ref|XP_001377412.1| PREDICTED: simila ( 862) 4721 1006.8 0 gi|51491295|emb|CAH18708.1| hypothetical protein [ ( 706) 4663 994.5 0 gi|32451897|gb|AAH54579.1| XPA binding protein 2 [ ( 849) 4291 916.0 0 gi|94732244|emb|CAK05397.1| XPA binding protein 2 ( 851) 4283 914.3 0 gi|34783757|gb|AAH56771.1| Xab2 protein [Danio rer ( 851) 4275 912.7 0 gi|194212558|ref|XP_001916974.1| PREDICTED: simila ( 765) 4230 903.1 0 gi|14250630|gb|AAH08778.1| XAB2 protein [Homo sapi ( 635) 4173 891.0 0 gi|119589428|gb|EAW69022.1| XPA binding protein 2, ( 743) 4010 856.7 0 gi|9295341|gb|AAF86951.1|AF226051_1 HCNP [Homo sap ( 855) 3971 848.5 0 gi|197246298|gb|AAI68421.1| Unknown (protein for M ( 839) 3960 846.1 0 gi|117558145|gb|AAI27433.1| LOC100036801 protein [ ( 838) 3948 843.6 0 gi|210084389|gb|EEA32918.1| hypothetical protein B ( 856) 3700 791.3 0 gi|73986880|ref|XP_868264.1| PREDICTED: similar to ( 832) 3668 784.5 0 gi|215509303|gb|EEC18756.1| pre-mRNA splicing fact ( 850) 3453 739.1 1.6e-210 gi|190588088|gb|EDV28130.1| hypothetical protein T ( 833) 3437 735.7 1.7e-209 gi|212517889|gb|EEB19718.1| XPA-binding protein, p ( 858) 3425 733.2 9.8e-209 gi|91092544|ref|XP_968085.1| PREDICTED: similar to ( 857) 3301 707.0 7.5e-201 gi|194176979|gb|EDW90590.1| GE12556 [Drosophila ya ( 882) 3296 706.0 1.6e-200 gi|190658925|gb|EDV56138.1| GG20394 [Drosophila er ( 882) 3287 704.1 5.9e-200 gi|7303287|gb|AAF58348.1| CG6197 [Drosophila melan ( 883) 3278 702.2 2.2e-199 gi|194113786|gb|EDW35829.1| GL17467 [Drosophila pe ( 848) 3269 700.3 8e-199 gi|54636792|gb|EAL26195.1| GA19432 [Drosophila pse ( 884) 3261 698.6 2.7e-198 gi|193901832|gb|EDW00699.1| GH21027 [Drosophila gr ( 891) 3251 696.5 1.2e-197 gi|194144321|gb|EDW60717.1| GJ21637 [Drosophila vi ( 884) 3241 694.4 5e-197 gi|190622408|gb|EDV37932.1| GF13706 [Drosophila an ( 882) 3217 689.3 1.7e-195 gi|194160091|gb|EDW74992.1| GK15972 [Drosophila wi ( 886) 3216 689.1 1.9e-195 gi|167863389|gb|EDS26772.1| XPA-binding protein 2 ( 862) 3197 685.1 3.1e-194 gi|66554055|ref|XP_395622.2| PREDICTED: similar to ( 836) 3186 682.7 1.5e-193 gi|156553931|ref|XP_001602137.1| PREDICTED: simila ( 841) 3168 678.9 2.1e-192 gi|73986878|ref|XP_854173.1| PREDICTED: similar to ( 867) 3155 676.2 1.4e-191 gi|158594635|gb|EDP33219.1| XPA-binding protein 2, ( 871) 2972 637.5 6.2e-180 gi|193693020|ref|XP_001951071.1| PREDICTED: simila ( 851) 2937 630.2 1e-177 gi|193911396|gb|EDW10263.1| GI18628 [Drosophila mo ( 870) 2744 589.4 1.9e-165 gi|157327878|emb|CAO16590.1| unnamed protein produ ( 888) 2572 553.1 1.7e-154 gi|53136500|emb|CAG32579.1| hypothetical protein [ ( 716) 2561 550.7 7e-154 gi|119402636|gb|EAW13057.1| DNA repair and transcr ( 854) 2512 540.4 1e-150 gi|134084290|emb|CAK43177.1| unnamed protein produ ( 822) 2511 540.2 1.2e-150 >>gi|25091548|sp|Q9HCS7.2|SYF1_HUMAN RecName: Full=Pre-m (855 aa) initn: 5017 init1: 5017 opt: 5017 Z-score: 5720.3 bits: 1069.3 E(): 0 Smith-Waterman score: 5017; 100.000% identity (100.000% similar) in 755 aa overlap (1-755:101-855) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|250 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 80 90 100 110 120 130 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 140 150 160 170 180 190 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 200 210 220 230 240 250 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 260 270 280 290 300 310 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 320 330 340 350 360 370 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD 380 390 400 410 420 430 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 440 450 460 470 480 490 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW 500 510 520 530 540 550 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 560 570 580 590 600 610 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR 620 630 640 650 660 670 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV 680 690 700 710 720 730 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR 740 750 760 770 780 790 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 800 810 820 830 840 850 KIAA11 SLKED ::::: gi|250 SLKED >>gi|10566459|dbj|BAB15807.1| XAB2 [Homo sapiens] (855 aa) initn: 5015 init1: 5015 opt: 5015 Z-score: 5718.0 bits: 1068.9 E(): 0 Smith-Waterman score: 5015; 99.868% identity (100.000% similar) in 755 aa overlap (1-755:101-855) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|105 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 80 90 100 110 120 130 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 RTFDRALRAMPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 140 150 160 170 180 190 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 200 210 220 230 240 250 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 260 270 280 290 300 310 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 320 330 340 350 360 370 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD 380 390 400 410 420 430 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 440 450 460 470 480 490 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW 500 510 520 530 540 550 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 560 570 580 590 600 610 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR 620 630 640 650 660 670 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV 680 690 700 710 720 730 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR 740 750 760 770 780 790 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|105 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 800 810 820 830 840 850 KIAA11 SLKED ::::: gi|105 SLKED >>gi|33339562|gb|AAQ14304.1|AF272147_1 crn-related prote (852 aa) initn: 5011 init1: 5011 opt: 5011 Z-score: 5713.5 bits: 1068.1 E(): 0 Smith-Waterman score: 5011; 99.868% identity (99.868% similar) in 755 aa overlap (1-755:98-852) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|333 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 70 80 90 100 110 120 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 130 140 150 160 170 180 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 190 200 210 220 230 240 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 250 260 270 280 290 300 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 310 320 330 340 350 360 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD 370 380 390 400 410 420 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 430 440 450 460 470 480 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|333 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKPYERGISLFKW 490 500 510 520 530 540 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 550 560 570 580 590 600 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR 610 620 630 640 650 660 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV 670 680 690 700 710 720 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR 730 740 750 760 770 780 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 790 800 810 820 830 840 KIAA11 SLKED ::::: gi|333 SLKED 850 >>gi|25091510|sp|Q99PK0.1|SYF1_RAT RecName: Full=Pre-mRN (855 aa) initn: 4984 init1: 4984 opt: 4984 Z-score: 5682.7 bits: 1062.4 E(): 0 Smith-Waterman score: 4984; 99.073% identity (99.868% similar) in 755 aa overlap (1-755:101-855) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|250 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 80 90 100 110 120 130 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 140 150 160 170 180 190 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 200 210 220 230 240 250 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 260 270 280 290 300 310 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 320 330 340 350 360 370 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD 380 390 400 410 420 430 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|250 DLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 440 450 460 470 480 490 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW 500 510 520 530 540 550 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|250 PNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 560 570 580 590 600 610 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 HAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR 620 630 640 650 660 670 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|250 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSV 680 690 700 710 720 730 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|250 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPPR 740 750 760 770 780 790 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::.:::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|250 AQSKIFFVRSDASREELAELAQQANPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 800 810 820 830 840 850 KIAA11 SLKED ::::: gi|250 SLKED >>gi|25091545|sp|Q9DCD2.1|SYF1_MOUSE RecName: Full=Pre-m (855 aa) initn: 4984 init1: 4984 opt: 4984 Z-score: 5682.7 bits: 1062.4 E(): 0 Smith-Waterman score: 4984; 99.073% identity (99.868% similar) in 755 aa overlap (1-755:101-855) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|250 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 80 90 100 110 120 130 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 140 150 160 170 180 190 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 200 210 220 230 240 250 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 260 270 280 290 300 310 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 320 330 340 350 360 370 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD 380 390 400 410 420 430 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|250 DLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 440 450 460 470 480 490 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW 500 510 520 530 540 550 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|250 PNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 560 570 580 590 600 610 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 HAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR 620 630 640 650 660 670 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|250 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSV 680 690 700 710 720 730 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|250 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPPR 740 750 760 770 780 790 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::.:::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|250 AQSKIFFVRSDASREELAELAQQANPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 800 810 820 830 840 850 KIAA11 SLKED ::::: gi|250 SLKED >>gi|18204681|gb|AAH21341.1| XPA binding protein 2 [Mus (855 aa) initn: 4979 init1: 4979 opt: 4979 Z-score: 5677.0 bits: 1061.3 E(): 0 Smith-Waterman score: 4979; 98.940% identity (99.868% similar) in 755 aa overlap (1-755:101-855) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|182 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 80 90 100 110 120 130 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 140 150 160 170 180 190 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 200 210 220 230 240 250 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 260 270 280 290 300 310 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 320 330 340 350 360 370 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD 380 390 400 410 420 430 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|182 DLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 440 450 460 470 480 490 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW 500 510 520 530 540 550 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|182 PNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 560 570 580 590 600 610 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 HAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR 620 630 640 650 660 670 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV :::::::::::::.::::::::::::::::::::::::::::::::::::.::::::::: gi|182 FADMECKLGEIDRTRAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSV 680 690 700 710 720 730 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|182 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPPR 740 750 760 770 780 790 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::.:::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|182 AQSKIFFVRSDASREELAELAQQANPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 800 810 820 830 840 850 KIAA11 SLKED ::::: gi|182 SLKED >>gi|109123174|ref|XP_001090436.1| PREDICTED: XPA bindin (858 aa) initn: 4472 init1: 4472 opt: 4979 Z-score: 5676.9 bits: 1061.3 E(): 0 Smith-Waterman score: 4979; 98.817% identity (99.080% similar) in 761 aa overlap (1-755:98-858) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|109 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 70 80 90 100 110 120 40 50 60 70 80 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSP------ESAEEYI ::::::::::::::::::::::::::::::::::::::::::::.:: .:::::: gi|109 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKVSPAGTLVPQSAEEYI 130 140 150 160 170 180 90 100 110 120 130 140 KIAA11 EYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAII 190 200 210 220 230 240 150 160 170 180 190 200 KIAA11 RGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEE 250 260 270 280 290 300 210 220 230 240 250 260 KIAA11 SMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRV 310 320 330 340 350 360 270 280 290 300 310 320 KIAA11 ALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKV 370 380 390 400 410 420 330 340 350 360 370 380 KIAA11 NFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSL 430 440 450 460 470 480 390 400 410 420 430 440 KIAA11 KVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERG 490 500 510 520 530 540 450 460 470 480 490 500 KIAA11 ISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEE 550 560 570 580 590 600 510 520 530 540 550 560 KIAA11 EWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHA 610 620 630 640 650 660 570 580 590 600 610 620 KIAA11 REMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 REMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEML 670 680 690 700 710 720 630 640 650 660 670 680 KIAA11 RIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAE 730 740 750 760 770 780 690 700 710 720 730 740 KIAA11 RDQPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSV :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RDQPSRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSV 790 800 810 820 830 840 750 KIAA11 PAAVFGSLKED ::::::::::: gi|109 PAAVFGSLKED 850 >>gi|133777470|gb|AAI14737.1| XPA binding protein 2 [Bos (855 aa) initn: 4973 init1: 4973 opt: 4973 Z-score: 5670.1 bits: 1060.0 E(): 0 Smith-Waterman score: 4973; 98.940% identity (99.868% similar) in 755 aa overlap (1-755:101-855) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|133 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 80 90 100 110 120 130 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 140 150 160 170 180 190 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 200 210 220 230 240 250 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 260 270 280 290 300 310 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 320 330 340 350 360 370 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|133 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVSFKQVD 380 390 400 410 420 430 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::.::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|133 DLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 440 450 460 470 480 490 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW 500 510 520 530 540 550 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 560 570 580 590 600 610 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|133 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRSIYQKAIEVLSDEHAREMCLR 620 630 640 650 660 670 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|133 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSV 680 690 700 710 720 730 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|133 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPSR 740 750 760 770 780 790 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::::::::::::::::::::.:::::.:::::::::::::::::::::::::::::: gi|133 AQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 800 810 820 830 840 850 KIAA11 SLKED ::::: gi|133 SLKED >>gi|73986874|ref|XP_542113.2| PREDICTED: similar to XPA (852 aa) initn: 4972 init1: 4972 opt: 4972 Z-score: 5669.0 bits: 1059.8 E(): 0 Smith-Waterman score: 4972; 98.675% identity (99.868% similar) in 755 aa overlap (1-755:98-852) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|739 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 70 80 90 100 110 120 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 130 140 150 160 170 180 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 190 200 210 220 230 240 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 250 260 270 280 290 300 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|739 METASELGREEEDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 310 320 330 340 350 360 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD :::::::::::::::::::::::::::::::::::::::::::::.::::::::.::::: gi|739 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEKATKVSFKQVD 370 380 390 400 410 420 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::.::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|739 DLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 430 440 450 460 470 480 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW 490 500 510 520 530 540 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 550 560 570 580 590 600 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR 610 620 630 640 650 660 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV ::::::.:::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|739 FADMECRLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSV 670 680 690 700 710 720 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|739 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPSR 730 740 750 760 770 780 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::::::::::::::::::::.:::::.:::::::::::::::::::::::::::::: gi|739 AQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 790 800 810 820 830 840 KIAA11 SLKED ::::: gi|739 SLKED 850 >>gi|74219245|dbj|BAE26756.1| unnamed protein product [M (855 aa) initn: 4964 init1: 4964 opt: 4964 Z-score: 5659.8 bits: 1058.1 E(): 0 Smith-Waterman score: 4964; 98.940% identity (99.735% similar) in 755 aa overlap (1-755:101-855) 10 20 30 KIAA11 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTR :::::::::::::::::::::::::::::: gi|742 WYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTR 80 90 100 110 120 130 40 50 60 70 80 90 KIAA11 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSS 140 150 160 170 180 190 100 110 120 130 140 150 KIAA11 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTR 200 210 220 230 240 250 160 170 180 190 200 210 KIAA11 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 FTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAK 260 270 280 290 300 310 220 230 240 250 260 270 KIAA11 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 METASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR 320 330 340 350 360 370 280 290 300 310 320 330 KIAA11 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVD 380 390 400 410 420 430 340 350 360 370 380 390 KIAA11 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|742 DLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSML 440 450 460 470 480 490 400 410 420 430 440 450 KIAA11 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKW 500 510 520 530 540 550 460 470 480 490 500 510 KIAA11 PNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR :::::: ::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|742 PNVSDICSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLAR 560 570 580 590 600 610 520 530 540 550 560 570 KIAA11 HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 HAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR 620 630 640 650 660 670 580 590 600 610 620 630 KIAA11 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSV ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|742 FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSV 680 690 700 710 720 730 640 650 660 670 680 690 KIAA11 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|742 QATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPPR 740 750 760 770 780 790 700 710 720 730 740 750 KIAA11 AQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG :::::.:::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|742 AQSKIFFVRSDASREELAELAQQANPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 800 810 820 830 840 850 KIAA11 SLKED ::::: gi|742 SLKED 755 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 00:38:50 2009 done: Wed Mar 4 00:42:24 2009 Total Scan time: 1579.680 Total Display time: 0.470 Function used was FASTA [version 34.26.5 April 26, 2007]