HUGE

Gene/Protein Characteristic Table for KIAA1166

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK05399
Accession No. :	AB032992
Description :	Hepatocellular carcinoma-associated antigen 127.
HUGO Gene Name :
Clone Name :	hk01743 [Vector Info]
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 4147 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 3589 bp

Genome contig ID gi89161218r_63953093
PolyA signal sequence
(TATAAA,-24)
+----*----+----*----+----*----+----
TGTGTTCACTATATAAAATGTTCCTCTGCTCTTTG
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAGTAAGAGTGTTGTGTCTGTACAAATCCTTTTAACATGCATTCATTGG

Features of the protein sequence	Description

Length: 165 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
EDL95983	2.1e-41	100.0	similar to cDNA...	Rattus norvegicus
BAG57041	2.5e-41	100.0	unnamed protein...	Homo sapiens
AAH50850	2.8e-41	100.0	AK129302 protei...	Mus musculus
BAE33268	5.2e-41	99.2	unnamed protein...	Mus musculus
XP_001378910	6.8e-41	98.5	hypothetical pr...	Monodelphis dom...

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: TGTCTGATGATCCCTTCTCTC

Primer_r
: TACCTGAAACAAGATATGGGC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: X

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: TGTCTGATGATCCCTTCTCTC
Primer_r	: TACCTGAAACAAGATATGGGC
PCR product length	: 170 bp
PCR conditions	: 95 °C15 sec62 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	3589 bp
Genome contig ID	gi89161218r_63953093
PolyA signal sequence (TATAAA,-24)	+--------+--------+----*----+---- TGTGTTCACTATATAAAATGTTCCTCTGCTCTTTG
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AAAGTAAGAGTGTTGTGTCTGTACAAATCCTTTTAACATGCATTCATTGG

Gene/Protein Characteristic Table for KIAA1166

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information