hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19050187/chunk_1/iprscan-20080501-19050187.nocrc
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Query sequence: KIAA1161
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF01055.16.fs  Glycosyl hydrolases family 31            234.8    1.7e-67   2
PF01055.16.ls  Glycosyl hydrolases family 31            165.1    1.6e-46   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF01055.16.ls    1/1     248   678 ..     1   593 []   165.1  1.6e-46
PF01055.16.fs    1/2     295   434 ..    45   216 ..    95.7  3.9e-27
PF01055.16.fs    2/2     496   651 ..   382   554 ..   139.1  2.4e-39

Alignments of top-scoring domains:
PF01055.16.ls: domain 1 of 1, from 248 to 678: score 165.1, E = 1.6e-46
                   *->YffayGGpt...P.kdvvkqYteLTGrPalp.....PyWalGfhqcR
                       + +  G + ++++k  v++Y     r + p+  ++P W+ +     
    KIAA1161   248    RVCV--GSDvtsIhKYMVRRYFNKPSRVPAPeafrdPIWSTWALY-- 290  

                   wgYtdksedevvrevvdgfreadIPlDviwlDidWhrfdsfdYmdgyrdF
                    +    ++d  v+ ++++ r +++  + + +D+         Y+  y+dF
    KIAA1161   291 GRA--VDQDK-VLRFAQQIRLHHFNSSHLEIDD--------MYTPAYGDF 329  

                   TwdperFPddkpkemldeLhekGiklvviidPgisidkpdngeddeygvy
                    +d+++FP+    +m ++L++ G++++++++P +     +++    +  +
    KIAA1161   330 DFDEVKFPN--ASDMFRRLRDAGFRVTLWVHPFV-----NYN----SSRF 368  

                   degkenkgkdyFvKnadG.siyiGavWPDGpsafpDFtnpfdptnparkW
                    eg+e   + +Fv+ ++G+ + + + W  G +a +DFt+p +    ar+W
    KIAA1161   369 GEGVE---RELFVREPTGrLPALVRWWN-GIGAVLDFTHP-K----ARDW 409  

                   WadeiknlydelgsglGidGiWiDMNEPsvw.g.FcGscgpnt.f.lp.e
                   +++ +++l       + +  ++ D +E s  +++F      +t  +lp+ 
    KIAA1161   410 FQGHLRRLRS----RYSVASFKFDAGEVSYLpRdF------STyRpLPdP 449  

                   .ga.ryyegFesNGqgtnaepasdsawrvegtsnstldPdptkpenlyPY
                   ++++r                                             
    KIAA1161   450 sVWsRR-------------------------------------------- 455  

                   aInnqgrgdlgekTmptdavHygggrktevrdhyfydggdpeevHNlYGl
                                                              +   + l
    KIAA1161   456 -------------------------------YTE--------MALPFFSL 466  

                   lmakAtyeglrkrssrplKnkRpFilSRSgfaGsQRYaaahWtGDNtssW
                    +++  y+  +++                        +    + D  s W
    KIAA1161   467 AEVRVGYQS-QNI-----------------------SC-FFRLVDRDSVW 491  

                   ...ehLrySipmgLsfglsGiPfvGaDiGGFfGgnkdnenfh.lgpteaE
                   + + +Lr  ip++L+ ++ G+Pf+ +D+ G  G n   +  ++ + +e+E
    KIAA1161   492 gydLGLRSLIPAVLTVSMLGYPFILPDMVG--G-NAVPQRTAgGDVPERE 538  

                   LcvRWmQlGAFyPffRnHssngtkrvqEPWlfgeeaevaeaarkalrlRY
                   L++RW +++AF+P ++      +++   PW+++ e  v+++a k+  lR 
    KIAA1161   539 LYIRWLEVAAFMPAMQF-----SIP---PWRYDAE--VVAIAQKFAALRA 578  

                   rLL.PYlYtlfyeAhetGlPvmRPLflefPdDentydiddQfllGddLLV
                   +L  P l  l+ e ++tG P++RPL++  P De+++ id Qfl Gd LLV
    KIAA1161   579 SLVaPLLLELAGEVTDTGDPIVRPLWWIAPGDETAHRIDSQFLIGDTLLV 628  

                   APVleegatsrdvYLPreGvgeGgtWyDffdwtgevyeggteggggqtvt
                   APVle+g+++rdvYLP      G +W ++    ge      + ++  ++ 
    KIAA1161   629 APVLEPGKQERDVYLP-----AG-KWRSY---KGE--LF--DKTPVLLTD 665  

                   vdAPLdtiPvfvRgGsIi<-*
                   ++++Ld+i  f          
    KIAA1161   666 YPVDLDEIAYF-----TW    678  

PF01055.16.fs: domain 1 of 2, from 295 to 434: score 95.7, E = 3.9e-27
                   *->sedevvrevvdgfreadIPlDviwlDidWhrfdsfdYmdgyrdFTwd
                      ++d  v+ ++++ r +++  + + +D+         Y+  y+dF +d
    KIAA1161   295    DQDK-VLRFAQQIRLHHFNSSHLEIDD--------MYTPAYGDFDFD 332  

                   perFPddkpkemldeLhekGiklvviidPgisidkpdngeddeygvydeg
                   +++FP+    +m ++L++ G++++++++P +     +++    +  + eg
    KIAA1161   333 EVKFPN--ASDMFRRLRDAGFRVTLWVHPFV-----NYN----SSRFGEG 371  

                   kenkgkdyFvKnadG.siyiGavWPDGpsafpDFtnpfdptnparkWWad
                   +e   + +Fv+ ++G+ + + + W  G +a +DFt+p +    ar+W+++
    KIAA1161   372 VE---RELFVREPTGrLPALVRWWN-GIGAVLDFTHP-K----ARDWFQG 412  

                   eiknlydelgsglGidGiWiDMNEPs<-*
                    +++l       + +  ++ D +E s   
    KIAA1161   413 HLRRLRS----RYSVASFKFDAGEVS    434  

PF01055.16.fs: domain 2 of 2, from 496 to 651: score 139.1, E = 2.4e-39
                   *->hLrySipmgLsfglsGiPfvGaDiGGFfGgnkdnenfh.lgpteaEL
                      +Lr  ip++L+ ++ G+Pf+ +D+ G  G n   +  ++ + +e+EL
    KIAA1161   496    GLRSLIPAVLTVSMLGYPFILPDMVG--G-NAVPQRTAgGDVPEREL 539  

                   cvRWmQlGAFyPffRnHssngtkrvqEPWlfgeeaevaeaarkalrlRYr
                   ++RW +++AF+P ++      +++   PW+++ e  v+++a k+  lR +
    KIAA1161   540 YIRWLEVAAFMPAMQF-----SIP---PWRYDAE--VVAIAQKFAALRAS 579  

                   LL.PYlYtlfyeAhetGlPvmRPLflefPdDentydiddQfllGddLLVA
                   L  P l  l+ e ++tG P++RPL++  P De+++ id Qfl Gd LLVA
    KIAA1161   580 LVaPLLLELAGEVTDTGDPIVRPLWWIAPGDETAHRIDSQFLIGDTLLVA 629  

                   PVleegatsrdvYLPreGvgeGgtWyDf<-*
                   PVle+g+++rdvYLP      G +W ++   
    KIAA1161   630 PVLEPGKQERDVYLP-----AG-KWRSY    651  

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