# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh05667.fasta.nr -Q ../query/KIAA1156.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1156, 348 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826660 sequences Expectation_n fit: rho(ln(x))= 5.0650+/-0.000184; mu= 9.5404+/- 0.010 mean_var=80.3259+/-15.563, 0's: 35 Z-trim: 36 B-trim: 6 in 1/66 Lambda= 0.143102 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119584354|gb|EAW63950.1| SLIT-ROBO Rho GTPase a ( 955) 2197 463.6 7.2e-128 gi|76665096|ref|XP_590495.2| PREDICTED: similar to (1075) 2197 463.7 7.8e-128 gi|149728319|ref|XP_001495819.1| PREDICTED: SLIT-R (1075) 2197 463.7 7.8e-128 gi|24369934|gb|AAN57784.1|AF464189_1 WAVE-associat (1075) 2197 463.7 7.8e-128 gi|76665098|ref|XP_869609.1| PREDICTED: similar to (1099) 2197 463.7 7.9e-128 gi|48429207|sp|O43295.3|SRGP2_HUMAN RecName: Full= (1099) 2197 463.7 7.9e-128 gi|149728321|ref|XP_001495736.1| PREDICTED: SLIT-R (1099) 2197 463.7 7.9e-128 gi|73985028|ref|XP_852764.1| PREDICTED: similar to (1099) 2197 463.7 7.9e-128 gi|119584355|gb|EAW63951.1| SLIT-ROBO Rho GTPase a ( 935) 2191 462.4 1.7e-127 gi|149036886|gb|EDL91504.1| similar to WARP (predi ( 800) 2189 461.9 2e-127 gi|62648014|ref|XP_575637.1| PREDICTED: similar to (1099) 2189 462.0 2.5e-127 gi|148667017|gb|EDK99433.1| SLIT-ROBO Rho GTPase a ( 979) 2184 460.9 4.7e-127 gi|14028714|gb|AAK52474.1|AF338472_1 Rho GTPase-ac ( 987) 2184 460.9 4.7e-127 gi|189442797|gb|AAI67211.1| SLIT-ROBO Rho GTPase a (1099) 2184 461.0 5.1e-127 gi|48428625|sp|Q812A2.1|SRGP2_MOUSE RecName: Full= (1099) 2184 461.0 5.1e-127 gi|53129828|emb|CAG31418.1| hypothetical protein [ ( 853) 2170 458.0 3.1e-126 gi|26341836|dbj|BAC34580.1| unnamed protein produc ( 522) 2128 449.1 9e-124 gi|109035849|ref|XP_001097317.1| PREDICTED: simila (1075) 2131 450.0 9.9e-124 gi|109035846|ref|XP_001097218.1| PREDICTED: simila (1099) 2131 450.0 1e-123 gi|189520367|ref|XP_690072.3| PREDICTED: similar t (1094) 2063 436.0 1.7e-119 gi|24659712|gb|AAH39300.1| SRGAP3 protein [Homo sa ( 335) 1947 411.6 1.2e-112 gi|47229761|emb|CAG06957.1| unnamed protein produc (1090) 1873 396.8 1.1e-107 gi|26337429|dbj|BAC32400.1| unnamed protein produc ( 426) 1840 389.6 6.1e-106 gi|109097610|ref|XP_001116821.1| PREDICTED: simila (1059) 1745 370.3 9.5e-100 gi|114643999|ref|XP_001164049.1| PREDICTED: SLIT-R (1061) 1735 368.3 4e-99 gi|109097608|ref|XP_001116844.1| PREDICTED: simila (1083) 1729 367.0 9.6e-99 gi|48428624|sp|Q7Z6B7.1|SRGP1_HUMAN RecName: Full= (1085) 1729 367.0 9.6e-99 gi|114643995|ref|XP_509190.2| PREDICTED: SLIT-ROBO (1085) 1729 367.0 9.6e-99 gi|119892384|ref|XP_587244.3| PREDICTED: similar t (1085) 1729 367.0 9.6e-99 gi|73968703|ref|XP_538265.2| PREDICTED: similar to (1104) 1729 367.0 9.7e-99 gi|149715245|ref|XP_001491726.1| PREDICTED: SLIT-R (1085) 1727 366.6 1.3e-98 gi|119617528|gb|EAW97122.1| SLIT-ROBO Rho GTPase a (1022) 1722 365.6 2.5e-98 gi|114643997|ref|XP_001164248.1| PREDICTED: SLIT-R (1062) 1722 365.6 2.6e-98 gi|34604126|gb|AAQ79776.1| Rho GTPase activating p (1064) 1722 365.6 2.6e-98 gi|124486650|ref|NP_001074506.1| SLIT-ROBO Rho GTP (1085) 1705 362.1 3e-97 gi|109480632|ref|XP_235213.4| PREDICTED: similar t (1085) 1699 360.8 7e-97 gi|148692479|gb|EDL24426.1| mCG114195 [Mus musculu (1022) 1698 360.6 7.7e-97 gi|122066214|sp|Q91Z69.2|SRGP1_MOUSE RecName: Full (1062) 1698 360.6 8e-97 gi|149029195|gb|EDL84471.1| similar to SLIT-ROBO R (1022) 1692 359.4 1.8e-96 gi|148725557|emb|CAK04592.2| novel protein similar ( 929) 1572 334.6 4.9e-89 gi|47229615|emb|CAG06811.1| unnamed protein produc (1144) 1543 328.7 3.6e-87 gi|55962271|emb|CAI11583.1| novel protein similar (1035) 1482 316.0 2.1e-83 gi|213626327|gb|AAI71580.1| Unknown (protein for M (1071) 1475 314.6 5.8e-83 gi|94734313|emb|CAK04781.1| novel protein similar ( 926) 1385 296.0 2e-77 gi|74005904|ref|XP_856820.1| PREDICTED: similar to ( 789) 1381 295.1 3.2e-77 gi|74005916|ref|XP_536107.2| PREDICTED: similar to ( 836) 1381 295.1 3.4e-77 gi|74005914|ref|XP_857023.1| PREDICTED: similar to (1027) 1381 295.2 3.9e-77 gi|74005924|ref|XP_857241.1| PREDICTED: similar to (1083) 1381 295.2 4.1e-77 gi|219520432|gb|AAI44344.1| SRGAP2 protein [Homo s (1070) 1379 294.8 5.4e-77 gi|221041046|dbj|BAH12200.1| unnamed protein produ ( 789) 1376 294.0 6.6e-77 >>gi|119584354|gb|EAW63950.1| SLIT-ROBO Rho GTPase activ (955 aa) initn: 2184 init1: 2184 opt: 2197 Z-score: 2451.9 bits: 463.6 E(): 7.2e-128 Smith-Waterman score: 2197; 98.266% identity (98.844% similar) in 346 aa overlap (3-348:14-359) 10 20 30 40 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTVMKTYHMYHAESISAESK : .:. ::::::::::::::::::::::::::::::::::::::: gi|119 MNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTVMKTYHMYHAESISAESK 10 20 30 40 50 60 50 60 70 80 90 100 KIAA11 LKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKEKRQAKYSENKLKCTKAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKEKRQAKYSENKLKCTKAR 70 80 90 100 110 120 110 120 130 140 150 160 KIAA11 NDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLD 130 140 150 160 170 180 170 180 190 200 210 220 KIAA11 VIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLMRYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLMRYH 190 200 210 220 230 240 230 240 250 260 270 280 KIAA11 QLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYM 250 260 270 280 290 300 290 300 310 320 330 340 KIAA11 SKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAECGTTR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAECGTTRG 310 320 330 340 350 360 gi|119 RRNARTRNQDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPL 370 380 390 400 410 420 >>gi|76665096|ref|XP_590495.2| PREDICTED: similar to SLI (1075 aa) initn: 2184 init1: 2184 opt: 2197 Z-score: 2451.2 bits: 463.7 E(): 7.8e-128 Smith-Waterman score: 2197; 98.266% identity (98.844% similar) in 346 aa overlap (3-348:134-479) 10 20 30 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTV : .:. :::::::::::::::::::::: gi|766 HQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTV 110 120 130 140 150 160 40 50 60 70 80 90 KIAA11 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE 170 180 190 200 210 220 100 110 120 130 140 150 KIAA11 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT 230 240 250 260 270 280 160 170 180 190 200 210 KIAA11 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC 290 300 310 320 330 340 220 230 240 250 260 270 KIAA11 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA11 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL 410 420 430 440 450 460 340 KIAA11 KQTLGEGERAECGTTR :::::::::::::::: gi|766 KQTLGEGERAECGTTRGRRNARTRNQDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQ 470 480 490 500 510 520 >>gi|149728319|ref|XP_001495819.1| PREDICTED: SLIT-ROBO (1075 aa) initn: 2184 init1: 2184 opt: 2197 Z-score: 2451.2 bits: 463.7 E(): 7.8e-128 Smith-Waterman score: 2197; 98.266% identity (98.844% similar) in 346 aa overlap (3-348:134-479) 10 20 30 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTV : .:. :::::::::::::::::::::: gi|149 HQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTV 110 120 130 140 150 160 40 50 60 70 80 90 KIAA11 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE 170 180 190 200 210 220 100 110 120 130 140 150 KIAA11 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT 230 240 250 260 270 280 160 170 180 190 200 210 KIAA11 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC 290 300 310 320 330 340 220 230 240 250 260 270 KIAA11 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA11 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL 410 420 430 440 450 460 340 KIAA11 KQTLGEGERAECGTTR :::::::::::::::: gi|149 KQTLGEGERAECGTTRGRRNARARNQDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQ 470 480 490 500 510 520 >>gi|24369934|gb|AAN57784.1|AF464189_1 WAVE-associated R (1075 aa) initn: 2184 init1: 2184 opt: 2197 Z-score: 2451.2 bits: 463.7 E(): 7.8e-128 Smith-Waterman score: 2197; 98.266% identity (98.844% similar) in 346 aa overlap (3-348:134-479) 10 20 30 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTV : .:. :::::::::::::::::::::: gi|243 HQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTV 110 120 130 140 150 160 40 50 60 70 80 90 KIAA11 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|243 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE 170 180 190 200 210 220 100 110 120 130 140 150 KIAA11 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|243 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT 230 240 250 260 270 280 160 170 180 190 200 210 KIAA11 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|243 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC 290 300 310 320 330 340 220 230 240 250 260 270 KIAA11 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|243 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA11 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|243 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL 410 420 430 440 450 460 340 KIAA11 KQTLGEGERAECGTTR :::::::::::::::: gi|243 KQTLGEGERAECGTTRGRRNARTRNQDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQ 470 480 490 500 510 520 >>gi|76665098|ref|XP_869609.1| PREDICTED: similar to SLI (1099 aa) initn: 2184 init1: 2184 opt: 2197 Z-score: 2451.1 bits: 463.7 E(): 7.9e-128 Smith-Waterman score: 2197; 98.266% identity (98.844% similar) in 346 aa overlap (3-348:134-479) 10 20 30 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTV : .:. :::::::::::::::::::::: gi|766 HQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTV 110 120 130 140 150 160 40 50 60 70 80 90 KIAA11 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE 170 180 190 200 210 220 100 110 120 130 140 150 KIAA11 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT 230 240 250 260 270 280 160 170 180 190 200 210 KIAA11 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC 290 300 310 320 330 340 220 230 240 250 260 270 KIAA11 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA11 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL 410 420 430 440 450 460 340 KIAA11 KQTLGEGERAECGTTR :::::::::::::::: gi|766 KQTLGEGERAECGTTRPPCLPPKPQKMRRPRPLSVCSHKLFNGCMETFIKDSGQAIPLVV 470 480 490 500 510 520 >>gi|48429207|sp|O43295.3|SRGP2_HUMAN RecName: Full=SLIT (1099 aa) initn: 2184 init1: 2184 opt: 2197 Z-score: 2451.1 bits: 463.7 E(): 7.9e-128 Smith-Waterman score: 2197; 98.266% identity (98.844% similar) in 346 aa overlap (3-348:134-479) 10 20 30 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTV : .:. :::::::::::::::::::::: gi|484 HQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTV 110 120 130 140 150 160 40 50 60 70 80 90 KIAA11 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE 170 180 190 200 210 220 100 110 120 130 140 150 KIAA11 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT 230 240 250 260 270 280 160 170 180 190 200 210 KIAA11 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC 290 300 310 320 330 340 220 230 240 250 260 270 KIAA11 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA11 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL 410 420 430 440 450 460 340 KIAA11 KQTLGEGERAECGTTR :::::::::::::::: gi|484 KQTLGEGERAECGTTRPPCLPPKPQKMRRPRPLSVYSHKLFNGSMEAFIKDSGQAIPLVV 470 480 490 500 510 520 >>gi|149728321|ref|XP_001495736.1| PREDICTED: SLIT-ROBO (1099 aa) initn: 2184 init1: 2184 opt: 2197 Z-score: 2451.1 bits: 463.7 E(): 7.9e-128 Smith-Waterman score: 2197; 98.266% identity (98.844% similar) in 346 aa overlap (3-348:134-479) 10 20 30 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTV : .:. :::::::::::::::::::::: gi|149 HQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTV 110 120 130 140 150 160 40 50 60 70 80 90 KIAA11 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE 170 180 190 200 210 220 100 110 120 130 140 150 KIAA11 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT 230 240 250 260 270 280 160 170 180 190 200 210 KIAA11 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC 290 300 310 320 330 340 220 230 240 250 260 270 KIAA11 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA11 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL 410 420 430 440 450 460 340 KIAA11 KQTLGEGERAECGTTR :::::::::::::::: gi|149 KQTLGEGERAECGTTRPPCLPPKPQKMRRPRPLSVCSHKLFNGCMEAFIKDSGQAIPLVV 470 480 490 500 510 520 >>gi|73985028|ref|XP_852764.1| PREDICTED: similar to SLI (1099 aa) initn: 2184 init1: 2184 opt: 2197 Z-score: 2451.1 bits: 463.7 E(): 7.9e-128 Smith-Waterman score: 2197; 98.266% identity (98.844% similar) in 346 aa overlap (3-348:134-479) 10 20 30 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTV : .:. :::::::::::::::::::::: gi|739 HQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTV 110 120 130 140 150 160 40 50 60 70 80 90 KIAA11 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE 170 180 190 200 210 220 100 110 120 130 140 150 KIAA11 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT 230 240 250 260 270 280 160 170 180 190 200 210 KIAA11 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC 290 300 310 320 330 340 220 230 240 250 260 270 KIAA11 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA11 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL 410 420 430 440 450 460 340 KIAA11 KQTLGEGERAECGTTR :::::::::::::::: gi|739 KQTLGEGERAECGTTRPPCLPPKPQKMRRPRPLSVCSHKLFNGCMEAFIKDSGQAIPLVV 470 480 490 500 510 520 >>gi|119584355|gb|EAW63951.1| SLIT-ROBO Rho GTPase activ (935 aa) initn: 2191 init1: 2191 opt: 2191 Z-score: 2445.3 bits: 462.4 E(): 1.7e-127 Smith-Waterman score: 2191; 100.000% identity (100.000% similar) in 339 aa overlap (10-348:1-339) 10 20 30 40 50 60 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTVMKTYHMYHAESISAESKLKEAEKQEEKQ ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MSKEIGLQMHEELLKVTNELYTVMKTYHMYHAESISAESKLKEAEKQEEKQ 10 20 30 40 50 70 80 90 100 110 120 KIAA11 FNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATN 60 70 80 90 100 110 130 140 150 160 170 180 KIAA11 AAISKYYIHDVSDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDVIENAVDNLDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AAISKYYIHDVSDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDVIENAVDNLDS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA11 RSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLMRYHQLQSRLATLKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLMRYHQLQSRLATLKI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA11 ENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKINIAKRRAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKINIAKRRAN 240 250 260 270 280 290 310 320 330 340 KIAA11 QQETEMFYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAECGTTR :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QQETEMFYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAECGTTRGRRNARTRNQDS 300 310 320 330 340 350 gi|119 GQAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLVDDQNERDINS 360 370 380 390 400 410 >>gi|149036886|gb|EDL91504.1| similar to WARP (predicted (800 aa) initn: 2176 init1: 2176 opt: 2189 Z-score: 2444.0 bits: 461.9 E(): 2e-127 Smith-Waterman score: 2189; 97.399% identity (98.844% similar) in 346 aa overlap (3-348:134-479) 10 20 30 KIAA11 TCDCVRIQAMSKEIGLQMHEELLKVTNELYTV : .:. :::::::::::::::::::::: gi|149 HQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTV 110 120 130 140 150 160 40 50 60 70 80 90 KIAA11 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDLSMNLLRHEDRPQRRSSVKKIEKMKE 170 180 190 200 210 220 100 110 120 130 140 150 KIAA11 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDVSDLIDCCDLGFHASLARTFRT 230 240 250 260 270 280 160 170 180 190 200 210 KIAA11 YLSAEYNLETSRHEGLDVIENAVDNLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVC :::::::::::::::::.:::::::::::::::::::::.:::::::::::::::::::: gi|149 YLSAEYNLETSRHEGLDIIENAVDNLDSRSDKHTVMDMCSQVFCPPLKFEFQPHMGDEVC 290 300 310 320 330 340 220 230 240 250 260 270 KIAA11 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA11 HSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HSRSTESIKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYVNGSNLITKLQAKHDLL 410 420 430 440 450 460 340 KIAA11 KQTLGEGERAECGTTR :::::::::::::::: gi|149 KQTLGEGERAECGTTRPPCLPPKPQKMRRPRPLSVYSHKLFNGSMEAFIKDSGQAIPLVV 470 480 490 500 510 520 348 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 23:01:54 2009 done: Tue Mar 3 23:06:55 2009 Total Scan time: 1415.190 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]