# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh05864.fasta.nr -Q ../query/KIAA1142.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1142, 467 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7763571 sequences Expectation_n fit: rho(ln(x))= 6.5775+/-0.00021; mu= 5.8431+/- 0.012 mean_var=153.2645+/-29.729, 0's: 28 Z-trim: 354 B-trim: 196 in 1/67 Lambda= 0.103599 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|52545876|emb|CAD38914.2| hypothetical protein [ ( 438) 2972 455.8 9.7e-126 gi|73947692|ref|XP_867241.1| PREDICTED: similar to ( 439) 2866 440.0 5.7e-121 gi|119577266|gb|EAW56862.1| p21(CDKN1A)-activated ( 437) 2579 397.1 4.7e-108 gi|21961175|gb|AAH34511.1| PAK4 protein [Homo sapi ( 501) 2516 387.7 3.5e-105 gi|194374207|dbj|BAG56999.1| unnamed protein produ ( 395) 2503 385.7 1.1e-104 gi|12585288|sp|O96013.1|PAK4_HUMAN RecName: Full=S ( 591) 2503 385.9 1.5e-104 gi|33303837|gb|AAQ02432.1| p21 [synthetic construc ( 592) 2503 385.9 1.5e-104 gi|158257110|dbj|BAF84528.1| unnamed protein produ ( 591) 2496 384.8 3.1e-104 gi|73947694|ref|XP_867251.1| PREDICTED: similar to ( 502) 2421 373.5 6.6e-101 gi|73947690|ref|XP_541627.2| PREDICTED: similar to ( 592) 2398 370.2 8e-100 gi|47117219|sp|Q8BTW9.1|PAK4_MOUSE RecName: Full=S ( 593) 2387 368.5 2.5e-99 gi|20987954|gb|AAH30389.1| Pak4 protein [Mus muscu ( 407) 2384 367.9 2.6e-99 gi|149056455|gb|EDM07886.1| p21 (CDKN1A)-activated ( 593) 2385 368.2 3.1e-99 gi|109658190|gb|AAI18111.1| P21 protein (Cdc42/Rac ( 593) 2382 367.8 4.2e-99 gi|28974488|gb|AAO61496.1| p21-activated protein k ( 593) 2373 366.4 1.1e-98 gi|126329193|ref|XP_001368325.1| PREDICTED: simila ( 690) 2213 342.6 1.9e-91 gi|118118945|ref|XP_001233796.1| PREDICTED: simila ( 504) 2141 331.7 2.6e-88 gi|194388086|dbj|BAG65427.1| unnamed protein produ ( 347) 2056 318.8 1.4e-84 gi|12804135|gb|AAH02921.1| P21 protein (Cdc42/Rac) ( 426) 2054 318.6 1.9e-84 gi|117558551|gb|AAI27317.1| LOC100036644 protein [ ( 650) 2010 312.2 2.4e-82 gi|49256683|gb|AAH74067.1| Zgc:92014 [Danio rerio] ( 663) 2000 310.7 7e-82 gi|151567918|pdb|2Q0N|A Chain A, Structure Of Huma ( 301) 1992 309.2 9.3e-82 gi|90109122|pdb|2CDZ|A Chain A, Crystal Structure ( 303) 1992 309.2 9.4e-82 gi|14330664|emb|CAC40979.1| PAK5 protein [Xenopus ( 650) 1993 309.7 1.4e-81 gi|56269120|gb|AAH87332.1| PAK5 protein [Xenopus l ( 650) 1993 309.7 1.4e-81 gi|47210064|emb|CAF96127.1| unnamed protein produc ( 589) 1971 306.3 1.3e-80 gi|194215412|ref|XP_001497193.2| PREDICTED: simila ( 445) 1935 300.8 4.5e-79 gi|73536296|pdb|2BVA|A Chain A, Crystal Structure ( 292) 1928 299.6 6.9e-79 gi|210089763|gb|EEA38060.1| hypothetical protein B ( 443) 1848 287.8 3.7e-75 gi|109124668|ref|XP_001085295.1| PREDICTED: p21-ac ( 565) 1832 285.6 2.3e-74 gi|126304345|ref|XP_001382125.1| PREDICTED: hypoth ( 721) 1784 278.5 3.9e-72 gi|47217276|emb|CAG01499.1| unnamed protein produc ( 908) 1770 276.5 1.9e-71 gi|45751665|gb|AAH68016.1| P21(CDKN1A)-activated k ( 711) 1762 275.2 3.7e-71 gi|149640949|ref|XP_001514843.1| PREDICTED: hypoth ( 722) 1758 274.6 5.7e-71 gi|149023406|gb|EDL80300.1| p21 (CDKN1A)-activated ( 718) 1757 274.5 6.3e-71 gi|197245608|gb|AAI68506.1| Pak7 protein [Danio re ( 711) 1756 274.3 7e-71 gi|76363285|sp|Q8C015.1|PAK7_MOUSE RecName: Full=S ( 719) 1751 273.6 1.2e-70 gi|73991301|ref|XP_542895.2| PREDICTED: similar to ( 719) 1747 273.0 1.8e-70 gi|114681031|ref|XP_525261.2| PREDICTED: p21-activ ( 777) 1746 272.8 2.1e-70 gi|109092911|ref|XP_001113709.1| PREDICTED: p21-ac ( 777) 1744 272.5 2.6e-70 gi|119905034|ref|XP_591106.3| PREDICTED: similar t ( 719) 1743 272.4 2.7e-70 gi|26347759|dbj|BAC37528.1| unnamed protein produc ( 719) 1741 272.1 3.3e-70 gi|55730897|emb|CAH92167.1| hypothetical protein [ ( 719) 1741 272.1 3.3e-70 gi|73991305|ref|XP_859533.1| PREDICTED: similar to ( 426) 1737 271.2 3.5e-70 gi|90080966|dbj|BAE89964.1| unnamed protein produc ( 382) 1735 270.9 4e-70 gi|158256238|dbj|BAF84090.1| unnamed protein produ ( 719) 1736 271.3 5.6e-70 gi|194044260|ref|XP_001928687.1| PREDICTED: simila ( 719) 1734 271.0 6.9e-70 gi|149733075|ref|XP_001493350.1| PREDICTED: simila ( 719) 1731 270.6 9.4e-70 gi|40037528|gb|AAR37415.1| p21-activated kinase 5 ( 719) 1730 270.4 1e-69 gi|12585290|sp|Q9P286.1|PAK7_HUMAN RecName: Full=S ( 719) 1730 270.4 1e-69 >>gi|52545876|emb|CAD38914.2| hypothetical protein [Homo (438 aa) initn: 2972 init1: 2972 opt: 2972 Z-score: 2413.6 bits: 455.8 E(): 9.7e-126 Smith-Waterman score: 2972; 100.000% identity (100.000% similar) in 438 aa overlap (30-467:1-438) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::::::::::::::::::::::::::::: gi|525 MFGKRKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 100 110 120 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKGEPHDVAPNGPSAGGLAIPQSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKGEPHDVAPNGPSAGGLAIPQSSS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA11 SSSRPPTRARGAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRSPQREPQRVSHEQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 SSSRPPTRARGAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRSPQREPQRVSHEQF 100 110 120 130 140 150 190 200 210 220 230 240 KIAA11 RAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 RAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF 160 170 180 190 200 210 250 260 270 280 290 300 KIAA11 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV 220 230 240 250 260 270 310 320 330 340 350 360 KIAA11 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP 280 290 300 310 320 330 370 380 390 400 410 420 KIAA11 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 340 350 360 370 380 390 430 440 450 460 KIAA11 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR ::::::::::::::::::::::::::::::::::::::::::::::: gi|525 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 400 410 420 430 >>gi|73947692|ref|XP_867241.1| PREDICTED: similar to p21 (439 aa) initn: 2702 init1: 2091 opt: 2866 Z-score: 2328.0 bits: 440.0 E(): 5.7e-121 Smith-Waterman score: 2866; 95.918% identity (97.959% similar) in 441 aa overlap (30-467:1-439) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::.:::::::::::::::::::::::::: gi|739 MFGKKKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 100 110 120 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKGEPHDVAPNGPSAGGLAIPQSSS :::::::::::::::::::::::::::::::::::::::::..:::::::::::.::::: gi|739 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKGEPHNLAPNGPSAGGLAVPQSSS 40 50 60 70 80 90 130 140 150 160 170 KIAA11 SSSRPPTRARGAPSPGVLGPHASEPQLAP---PACTPAAPAVPGPPGPRSPQREPQRVSH ::::::::: ::::::::::::::::: : .::.: .:::::::::::::::::: gi|739 --SRPPTRARGPPSPGVLGPHASEPQLAPQARPIAAPAGPPAPGPPGPRSPQREPQRVSH 100 110 120 130 140 180 190 200 210 220 230 KIAA11 EQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|739 EQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGRLVAVKKMDLRKQQRRE 150 160 170 180 190 200 240 250 260 270 280 290 KIAA11 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVC 210 220 230 240 250 260 300 310 320 330 340 350 KIAA11 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW 270 280 290 300 310 320 360 370 380 390 400 410 KIAA11 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 MAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV 330 340 350 360 370 380 420 430 440 450 460 KIAA11 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR :::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 390 400 410 420 430 >>gi|119577266|gb|EAW56862.1| p21(CDKN1A)-activated kina (437 aa) initn: 2607 init1: 2120 opt: 2579 Z-score: 2096.2 bits: 397.1 E(): 4.7e-108 Smith-Waterman score: 2579; 89.116% identity (92.744% similar) in 441 aa overlap (30-467:1-437) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::::::::::::::::::::::::::::: gi|119 MFGKRKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 100 110 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKGEPHDVAPNGPSAGGLAIPQS-- ::::::::::::::::::::::::::::::::::::: . . .: . :.:.. . gi|119 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKTIVR--GSKGAKDGALTLLLDEF 40 50 60 70 80 120 130 140 150 160 170 KIAA11 -SSSSSRPPTRARGAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRSPQREPQRVSH . : .: . : .: : . . . : . :::::::::::::::::::::::::: gi|119 ENMSVTRSNSLRRDSPPPPARARQ--ENGMPEEPCTPAAPAVPGPPGPRSPQREPQRVSH 90 100 110 120 130 140 180 190 200 210 220 230 KIAA11 EQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE 150 160 170 180 190 200 240 250 260 270 280 290 KIAA11 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVC 210 220 230 240 250 260 300 310 320 330 340 350 KIAA11 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW 270 280 290 300 310 320 360 370 380 390 400 410 KIAA11 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV 330 340 350 360 370 380 420 430 440 450 460 KIAA11 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR :::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 390 400 410 420 430 >>gi|21961175|gb|AAH34511.1| PAK4 protein [Homo sapiens] (501 aa) initn: 2513 init1: 2513 opt: 2516 Z-score: 2044.6 bits: 387.7 E(): 3.5e-105 Smith-Waterman score: 2836; 87.425% identity (87.425% similar) in 501 aa overlap (30-467:1-501) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::::::::::::::::::::::::::::: gi|219 MFGKRKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPK----------------------- ::::::::::::::::::::::::::::::::::::: gi|219 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKTIVRGSKGAKDGALTLLLDEFEN 40 50 60 70 80 90 100 110 KIAA11 ----------------------------------------GEPHDVAPNGPSAGGLAIPQ :::::::::::::::::::: gi|219 MSVTRSNSLRRDSPPPPARARQENGMPEEPATTARGGPGKGEPHDVAPNGPSAGGLAIPQ 100 110 120 130 140 150 120 130 140 150 160 170 KIAA11 SSSSSSRPPTRARGAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRSPQREPQRVSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 SSSSSSRPPTRARGAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRSPQREPQRVSH 160 170 180 190 200 210 180 190 200 210 220 230 KIAA11 EQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 EQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE 220 230 240 250 260 270 240 250 260 270 280 290 KIAA11 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVC 280 290 300 310 320 330 300 310 320 330 340 350 KIAA11 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW 340 350 360 370 380 390 360 370 380 390 400 410 KIAA11 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV 400 410 420 430 440 450 420 430 440 450 460 KIAA11 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR :::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 460 470 480 490 500 >>gi|194374207|dbj|BAG56999.1| unnamed protein product [ (395 aa) initn: 2499 init1: 2499 opt: 2503 Z-score: 2035.3 bits: 385.7 E(): 1.1e-104 Smith-Waterman score: 2503; 95.408% identity (97.194% similar) in 392 aa overlap (77-467:4-395) 50 60 70 80 90 100 KIAA11 EHRVHTGFDQHEQKFTGLPRQWQSLIEESARRPKPL-VDPACITSIQPGAPKGEPHDVAP .: .:. . : :. . .:::::::: gi|194 MGCQRSRPFNTYPRADTDHPSRGAQGEPHDVAP 10 20 30 110 120 130 140 150 160 KIAA11 NGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGP 40 50 60 70 80 90 170 180 190 200 210 220 KIAA11 RSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAV 100 110 120 130 140 150 230 240 250 260 270 280 KIAA11 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 160 170 180 190 200 210 290 300 310 320 330 340 KIAA11 TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 220 230 240 250 260 270 350 360 370 380 390 400 KIAA11 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 280 290 300 310 320 330 410 420 430 440 450 460 KIAA11 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 340 350 360 370 380 390 KIAA11 TR :: gi|194 TR >>gi|12585288|sp|O96013.1|PAK4_HUMAN RecName: Full=Serin (591 aa) initn: 2499 init1: 2499 opt: 2503 Z-score: 2033.2 bits: 385.9 E(): 1.5e-104 Smith-Waterman score: 2656; 74.112% identity (74.112% similar) in 591 aa overlap (30-467:1-591) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::::::::::::::::::::::::::::: gi|125 MFGKRKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPK----------------------- ::::::::::::::::::::::::::::::::::::: gi|125 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKTIVRGSKGAKDGALTLLLDEFEN 40 50 60 70 80 90 KIAA11 ------------------------------------------------------------ gi|125 MSVTRSNSLRRDSPPPPARARQENGMPEEPATTARGGPGKAGSRGRFAGHSEAGGGSGDR 100 110 120 130 140 150 KIAA11 ------------------------------------------------------------ gi|125 RRAGPEKRPKSSREGSGGPQESSRDKRPLSGPDVGTPQPAGLASGAKLAAGRPFNTYPRA 160 170 180 190 200 210 100 110 120 130 140 KIAA11 ----------GEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQL :::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 DTDHPSRGAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQL 220 230 240 250 260 270 150 160 170 180 190 200 KIAA11 APPACTPAAPAVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 APPACTPAAPAVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGS 280 290 300 310 320 330 210 220 230 240 250 260 KIAA11 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL 340 350 360 370 380 390 270 280 290 300 310 320 KIAA11 WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 400 410 420 430 440 450 330 340 350 360 370 380 KIAA11 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 460 470 480 490 500 510 390 400 410 420 430 440 KIAA11 EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 520 530 540 550 560 570 450 460 KIAA11 LAKAGPPASIVPLMRQNRTR :::::::::::::::::::: gi|125 LAKAGPPASIVPLMRQNRTR 580 590 >>gi|33303837|gb|AAQ02432.1| p21 [synthetic construct] (592 aa) initn: 2499 init1: 2499 opt: 2503 Z-score: 2033.2 bits: 385.9 E(): 1.5e-104 Smith-Waterman score: 2656; 74.112% identity (74.112% similar) in 591 aa overlap (30-467:1-591) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::::::::::::::::::::::::::::: gi|333 MFGKRKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPK----------------------- ::::::::::::::::::::::::::::::::::::: gi|333 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKTIVRGSKGAKDGALTLLLDEFEN 40 50 60 70 80 90 KIAA11 ------------------------------------------------------------ gi|333 MSVTRSNSLRRDSPPPPARARQENGMPEEPATTARGGPGKAGSRGRFAGHSEAGGGSGDR 100 110 120 130 140 150 KIAA11 ------------------------------------------------------------ gi|333 RRAGPEKRPKSSREGSGGPQESSRDKRPLSGPDVGTPQPAGLASGAKLAAGRPFNTYPRA 160 170 180 190 200 210 100 110 120 130 140 KIAA11 ----------GEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQL :::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 DTDHPSRGAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQL 220 230 240 250 260 270 150 160 170 180 190 200 KIAA11 APPACTPAAPAVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 APPACTPAAPAVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGS 280 290 300 310 320 330 210 220 230 240 250 260 KIAA11 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL 340 350 360 370 380 390 270 280 290 300 310 320 KIAA11 WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 400 410 420 430 440 450 330 340 350 360 370 380 KIAA11 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 460 470 480 490 500 510 390 400 410 420 430 440 KIAA11 EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 520 530 540 550 560 570 450 460 KIAA11 LAKAGPPASIVPLMRQNRTR :::::::::::::::::::: gi|333 LAKAGPPASIVPLMRQNRTRL 580 590 >>gi|158257110|dbj|BAF84528.1| unnamed protein product [ (591 aa) initn: 2492 init1: 2492 opt: 2496 Z-score: 2027.5 bits: 384.8 E(): 3.1e-104 Smith-Waterman score: 2649; 73.942% identity (74.112% similar) in 591 aa overlap (30-467:1-591) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::::::::::::::::::::::::::::: gi|158 MFGKRKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPK----------------------- ::::::::::::::::::::::::::::::::::::: gi|158 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKTIVRGSKGAKDGALTLLLDGFEN 40 50 60 70 80 90 KIAA11 ------------------------------------------------------------ gi|158 MSVTRSNSLRRDSPPPPARARQENGMPEEPATTARGGPGKAGSRGRFAGHSEAGGGSGDR 100 110 120 130 140 150 KIAA11 ------------------------------------------------------------ gi|158 RRAGPEKRPKSSREGSGGPQESSRDKRPLSGPDVGTPQPAGLASGAKLAAGRPFNTYPRA 160 170 180 190 200 210 100 110 120 130 140 KIAA11 ----------GEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQL :::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DTDHPSRGAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQL 220 230 240 250 260 270 150 160 170 180 190 200 KIAA11 APPACTPAAPAVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 APPACTPAAPAVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGS 280 290 300 310 320 330 210 220 230 240 250 260 KIAA11 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL 340 350 360 370 380 390 270 280 290 300 310 320 KIAA11 WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 400 410 420 430 440 450 330 340 350 360 370 380 KIAA11 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 460 470 480 490 500 510 390 400 410 420 430 440 KIAA11 EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|158 EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPL 520 530 540 550 560 570 450 460 KIAA11 LAKAGPPASIVPLMRQNRTR :::::::::::::::::::: gi|158 LAKAGPPASIVPLMRQNRTR 580 590 >>gi|73947694|ref|XP_867251.1| PREDICTED: similar to p21 (502 aa) initn: 2091 init1: 2091 opt: 2421 Z-score: 1967.8 bits: 373.5 E(): 6.6e-101 Smith-Waterman score: 2730; 83.929% identity (85.714% similar) in 504 aa overlap (30-467:1-502) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::.:::::::::::::::::::::::::: gi|739 MFGKKKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPK----------------------- ::::::::::::::::::::::::::::::::::::: gi|739 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKTIVRGSKGAKDGALTLLLDEFEN 40 50 60 70 80 90 100 110 KIAA11 ----------------------------------------GEPHDVAPNGPSAGGLAIPQ ::::..:::::::::::.:: gi|739 MSVTRSNSLRRDSPPPPARARQENGMPAEPASTARGAPEKGEPHNLAPNGPSAGGLAVPQ 100 110 120 130 140 150 120 130 140 150 160 170 KIAA11 SSSSSSRPPTRARGAPSPGVLGPHASEPQLAP---PACTPAAPAVPGPPGPRSPQREPQR ::: ::::::::: ::::::::::::::::: : .::.: .::::::::::::::: gi|739 SSS--SRPPTRARGPPSPGVLGPHASEPQLAPQARPIAAPAGPPAPGPPGPRSPQREPQR 160 170 180 190 200 180 190 200 210 220 230 KIAA11 VSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|739 VSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGRLVAVKKMDLRKQQ 210 220 230 240 250 260 240 250 260 270 280 290 KIAA11 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA 270 280 290 300 310 320 300 310 320 330 340 350 KIAA11 AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 330 340 350 360 370 380 360 370 380 390 400 410 KIAA11 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|739 PYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL 390 400 410 420 430 440 420 430 440 450 460 KIAA11 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 450 460 470 480 490 500 >>gi|73947690|ref|XP_541627.2| PREDICTED: similar to Ser (592 aa) initn: 2548 init1: 2091 opt: 2398 Z-score: 1948.4 bits: 370.2 E(): 8e-100 Smith-Waterman score: 2550; 71.212% identity (72.727% similar) in 594 aa overlap (30-467:1-592) 10 20 30 40 50 60 KIAA11 PEAPRGVVTCLRALLSHQHQTRPHRVPGTMFGKRKKRVEISAPSNFEHRVHTGFDQHEQK ::::.:::::::::::::::::::::::::: gi|739 MFGKKKKRVEISAPSNFEHRVHTGFDQHEQK 10 20 30 70 80 90 KIAA11 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPK----------------------- ::::::::::::::::::::::::::::::::::::: gi|739 FTGLPRQWQSLIEESARRPKPLVDPACITSIQPGAPKTIVRGSKGAKDGALTLLLDEFEN 40 50 60 70 80 90 KIAA11 ------------------------------------------------------------ gi|739 MSVTRSNSLRRDSPPPPARARQENGMPAEPASTARGAPEKAGSQGRAAGRSEAGGSSGDR 100 110 120 130 140 150 KIAA11 ------------------------------------------------------------ gi|739 RRVGPEKRPKSSREGSGGPQESSRDKRPLSGPDVGTPQPAGLAGGARVAAGRPFNTYPRA 160 170 180 190 200 210 100 110 120 130 140 KIAA11 ----------GEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQL ::::..:::::::::::.::::: ::::::::: ::::::::::::::: gi|739 DTDHPARGAQGEPHNLAPNGPSAGGLAVPQSSS--SRPPTRARGPPSPGVLGPHASEPQL 220 230 240 250 260 150 160 170 180 190 200 KIAA11 AP---PACTPAAPAVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIG :: : .::.: .::::::::::::::::::::::::::::::::::::::::::::: gi|739 APQARPIAAPAGPPAPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIG 270 280 290 300 310 320 210 220 230 240 250 260 KIAA11 EGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|739 EGSTGIVCIATVRSSGRLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG 330 340 350 360 370 380 270 280 290 300 310 320 KIAA11 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 390 400 410 420 430 440 330 340 350 360 370 380 KIAA11 THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|739 THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEM 450 460 470 480 490 500 390 400 410 420 430 440 KIAA11 VDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 510 520 530 540 550 560 450 460 KIAA11 HPFLAKAGPPASIVPLMRQNRTR ::::::::::::::::::::::: gi|739 HPFLAKAGPPASIVPLMRQNRTR 570 580 590 467 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 21:51:22 2009 done: Tue Mar 3 21:56:00 2009 Total Scan time: 1575.480 Total Display time: 0.200 Function used was FASTA [version 34.26.5 April 26, 2007]