hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18145803/chunk_1/iprscan-20080501-18145803.nocrc
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Query sequence: KIAA1131
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00119                                                 267.6    9.9e-76   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00119    1/1    1701  2168 .]     1   407 []   267.6  9.9e-76

Alignments of top-scoring domains:
SM00119: domain 1 of 1, from 1701 to 2168: score 267.6, E = 9.9e-76
                   *->nsspddLkkrske..aLeIefvvnehgvgEeglDgGGvtrEFfflls
                      +  ++ ++ +++++++Le+ef       gEeg +g+G+t+EF++l+ 
    KIAA1131  1701    EWAENVMQIHADRksVLEVEF------LGEEG-TGLGPTLEFYALVA 1740 

                   kelfnptdygLFryspn.....dnae.k..s.kti.YigrlrylLfpnPs
                    e+++  d+g + +++n +++++++ + +++ k+ +Y++ +  +Lf  P+
    KIAA1131  1741 AEFQRT-DLGAWLCDDNfpddeSRHVdLggGlKPPgYYVQRSCGLFTAPF 1789 

                   agfaneehlaavyFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpk..
                   ++ ++e++++  +F+f+G++l+k++ +nrl+Dl+ ++pF+K ++   +++
    KIAA1131  1790 PQDSDELERITKLFHFLGIFLAKCIQDNRLVDLPISKPFFKLMCMGDIks 1839 

                   ..................................................
                   + ++   +++++++ + ++++++ ++++++++ + ++ +++++++   ++
    KIAA1131  1840 nmskliyesrgdrdlhctesqseasteeghdslsvgsfeedsksefildp 1889 

                   .........gtdvtlhDleslDPelyksLvwLi.lvrrKlel........
                   ++++++   + ++t++D+e ++P+  ++L+++ +l+ + +++ ++++ ++
    KIAA1131  1890 pkpkppawfNGILTWEDFELVNPHRARFLKEIKdLAIKRRQIlsnkglse 1939 

                   .eeDlseeskslend........iteveldmaLtFsivlesdfgevkvvE
                   +e  +  +  +l+n ++++++ +i++  l   L+F+ +  s   +++ v+
    KIAA1131  1940 dEKNTKLQELVLKNPsgsgpplsIED--LG--LNFQFCPSSRIYGFTAVD 1985 

                   LkpGGsnipVTeeNkkEYVhlvieyrlnkgvekqleAFreGFseVipeel
                   Lkp G++ ++T +N +EYV+l+ ++ + +g++kq+eAFr+GF++V+p e 
    KIAA1131  1986 LKPSGEDEMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKVFPMEK 2035 

                   LrylFdeeELeLLicGle.eeidvddLksnTeyrggYtensqtirfkkwF
                   L+  F  eE ++++cG++++ + ++d +++Te++ gYt++s+ +     F
    KIAA1131  2036 LS-SFSHEEVQMILCGNQsPSWAAEDIINYTEPKLGYTRDSPGF---LRF 2081 

                   WevvesFtneerrkLLqFVTGssrlPASvgGFaaLspsNGpqkFtIrkag
                    +v+  ++  er+ +LqF+TG+s lP  +gG+a+L+p     ++t++++ 
    KIAA1131  2082 VRVLCGMSSDERKAFLQFTTGCSTLP--PGGLANLHP-----RLTVVRKV 2124 

                   setlsdddrLPtAhTCfNrLkLPpYsSkeiLreKLLlAInegRiggeGFg
                         d ++P+++TC+++LkLP+YsS ei+re+LL A +e     +GF+
    KIAA1131  2125 D---ATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAATME-----KGFH 2166 

                   ls<-*
                   l+   
    KIAA1131  2167 LN    2168 

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