hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17483658/chunk_1/iprscan-20080501-17483658.nocrc
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Query sequence: KIAA1115
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04499.6.ls SIT4 phosphatase-associated protein            678.4   5.1e-201   1
PF04499.6.fs SIT4 phosphatase-associated protein            676.8   1.5e-200   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04499.6.fs   1/1     142   533 ..     1   599 []   676.8 1.5e-200
PF04499.6.ls   1/1     142   533 ..     1   599 []   678.4 5.1e-201

Alignments of top-scoring domains:
PF04499.6.fs: domain 1 of 1, from 142 to 533: score 676.8, E = 1.5e-200
                   *->necLLdrktdqiltFlkkkdnfVdklLkHIgisaiECLMDfLLrlis
                      +++L++rktdq+++Fl+kkd+fVd+lL+HIg+sai   MD+LLrl++
    KIAA1115   142    MGILINRKTDQLVSFLRKKDDFVDLLLQHIGTSAI---MDLLLRLLT 185  

                   TdDkpesrytgViqWLndqnLiekLvdlLhpSeYdpEYmldvQsnaadfL
                   ++++p++r ++V++WLn+++++++L++++hpS+ d+    +++sna+++L
    KIAA1115   186 CVERPQLR-QDVVNWLNEEKIVQRLIEQIHPSK-DE----NQHSNASQSL 229  

                   CaiiriSrDKLYIMNskldiqssIGPneLtrqLvSpetieqLldimlVEE
                   C+iir+Sr      ++++++q+s++P++L+++L+++etieqLl++m+   
    KIAA1115   230 CDIIRLSR------EQMIQVQDSPEPDQLLATLEKQETIEQLLSNMF--- 270  

                   GCPAEdsrsekggsaLvngvsiiIELlrKnN.....SdvsYDfvnslstq
                       E+++s   +s++v+g++++++Ll+++++++++++v+ +f++s+++q
    KIAA1115   271 ----EGEQS---QSVIVSGIQVLLTLLEPRRprsesVTVN-SFFSSVDGQ 312  

                   LEEieshLIEERHYSYGLMRPCMDNPPteRdPqiylgellegfLaerLpd
                   L E+ ++                   ++ +++ +++   l+++ ++rL++
    KIAA1115   313 L-ELLAQ-------------------GALEST-VSSVGALHAL-RPRLSC 340  

                   FlqTLLlkpekesvklPLLeTtyGklePPLGfeRlKIvELIAeLLhcsnm
                   F+q LLl+p+k ++    L++t+G+l+PPLG++Rl++v+L+A+ L+++++
    KIAA1115   341 FHQ-LLLEPPKLEP----LQMTWGMLAPPLGNTRLHVVKLLASALSANDA 385  

                   allnEprGEdIvreRDklRdklfehdtikesnarelvmkdeddnddtved
                   al++E                                             
    KIAA1115   386 ALTHE--------------------------------------------- 390  

                   nneedlknleDaNdsideeeqadtikskvkdtnksltnvdseeseaepvd
                                                                     
    KIAA1115     - -------------------------------------------------- -    

                   enngkvkaddnddDDeedyfEipydsesieeklRslPvVGDlLKIkLiKd
                                                                 L  +
    KIAA1115   391 ----------------------------------------------LL-A 393  

                   lgvipriLDLFFeYPWNNFLHnvVediiqqiL.......nspmdegyNsf
                   l+v++++LDLFF+Y++NNFLH++Ve ++ ++L+ ++++++sp+++++N +
    KIAA1115   394 LDVPNTMLDLFFHYVFNNFLHAQVEGCVSTMLslgpppdSSPETPIQN-P 442  

                   LvkhLLqecdSyrFLiekIleadedpnldgdiqsdFilpgskdsveasgk
                   +vkhLLq+c+    L+e+Il+++e++                d+v+++  
    KIAA1115   443 VVKHLLQQCR----LVERILTSWEEN----------------DRVQCA-- 470  

                   gglRlGYMGHLTlIAeeivkfselypssniqiqllkelpilledekWeey
                   gg+R+GYMGHLT++A+++v+++e++p++++ +qllkelp++++ e+We++
    KIAA1115   471 GGPRKGYMGHLTRVAGALVQNTEKGPNAEQLRQLLKELPSEQQ-EQWEAF 519  

                   vedvLedtrekyNv<-*
                   v+++L++t++k++v   
    KIAA1115   520 VSGPLAETNKKNMV    533  

PF04499.6.ls: domain 1 of 1, from 142 to 533: score 678.4, E = 5.1e-201
                   *->necLLdrktdqiltFlkkkdnfVdklLkHIgisaiECLMDfLLrlis
                      +++L++rktdq+++Fl+kkd+fVd+lL+HIg+sai   MD+LLrl++
    KIAA1115   142    MGILINRKTDQLVSFLRKKDDFVDLLLQHIGTSAI---MDLLLRLLT 185  

                   TdDkpesrytgViqWLndqnLiekLvdlLhpSeYdpEYmldvQsnaadfL
                   ++++p++r ++V++WLn+++++++L++++hpS+ d+    +++sna+++L
    KIAA1115   186 CVERPQLR-QDVVNWLNEEKIVQRLIEQIHPSK-DE----NQHSNASQSL 229  

                   CaiiriSrDKLYIMNskldiqssIGPneLtrqLvSpetieqLldimlVEE
                   C+iir+Sr      ++++++q+s++P++L+++L+++etieqLl++m+   
    KIAA1115   230 CDIIRLSR------EQMIQVQDSPEPDQLLATLEKQETIEQLLSNMF--- 270  

                   GCPAEdsrsekggsaLvngvsiiIELlrKnN.....SdvsYDfvnslstq
                       E+++s   +s++v+g++++++Ll+++++++++++v+ +f++s+++q
    KIAA1115   271 ----EGEQS---QSVIVSGIQVLLTLLEPRRprsesVTVN-SFFSSVDGQ 312  

                   LEEieshLIEERHYSYGLMRPCMDNPPteRdPqiylgellegfLaerLpd
                   L E+ ++                   ++ +++ +++   l+++ ++rL++
    KIAA1115   313 L-ELLAQ-------------------GALEST-VSSVGALHAL-RPRLSC 340  

                   FlqTLLlkpekesvklPLLeTtyGklePPLGfeRlKIvELIAeLLhcsnm
                   F+q LLl+p+k ++    L++t+G+l+PPLG++Rl++v+L+A+ L+++++
    KIAA1115   341 FHQ-LLLEPPKLEP----LQMTWGMLAPPLGNTRLHVVKLLASALSANDA 385  

                   allnEprGEdIvreRDklRdklfehdtikesnarelvmkdeddnddtved
                   al++E                                             
    KIAA1115   386 ALTHE--------------------------------------------- 390  

                   nneedlknleDaNdsideeeqadtikskvkdtnksltnvdseeseaepvd
                                                                     
    KIAA1115     - -------------------------------------------------- -    

                   enngkvkaddnddDDeedyfEipydsesieeklRslPvVGDlLKIkLiKd
                                                                 L  +
    KIAA1115   391 ----------------------------------------------LL-A 393  

                   lgvipriLDLFFeYPWNNFLHnvVediiqqiL.......nspmdegyNsf
                   l+v++++LDLFF+Y++NNFLH++Ve ++ ++L+ ++++++sp+++++N +
    KIAA1115   394 LDVPNTMLDLFFHYVFNNFLHAQVEGCVSTMLslgpppdSSPETPIQN-P 442  

                   LvkhLLqecdSyrFLiekIleadedpnldgdiqsdFilpgskdsveasgk
                   +vkhLLq+c+    L+e+Il+++e++                d+v+++  
    KIAA1115   443 VVKHLLQQCR----LVERILTSWEEN----------------DRVQCA-- 470  

                   gglRlGYMGHLTlIAeeivkfselypssniqiqllkelpilledekWeey
                   gg+R+GYMGHLT++A+++v+++e++p++++ +qllkelp++++ e+We++
    KIAA1115   471 GGPRKGYMGHLTRVAGALVQNTEKGPNAEQLRQLLKELPSEQQ-EQWEAF 519  

                   vedvLedtrekyNv<-*
                   v+++L++t++k++v   
    KIAA1115   520 VSGPLAETNKKNMV    533  

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