hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17213769/chunk_1/iprscan-20080501-17213769.nocrc
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Query sequence: KIAA1099
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
TIGR00231 small_GTP: small GTP-binding protein domain    31.9    7.3e-07   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
TIGR00231   1/1     129   287 ..     1   186 []    31.9  7.3e-07

Alignments of top-scoring domains:
TIGR00231: domain 1 of 1, from 129 to 287: score 31.9, E = 7.3e-07
                   *->lkdikigivGdpnvGkstllnrllgnkgsitesgptdgttrdyvtes
                        + k+givG  ++Gks+l+ r+l  +  + e  p    +r   +  
    KIAA1099   129    VPELKVGIVGNLASGKSALVHRYLTGT-YVQEESP--EGGRFKKE-- 170  

                   ieedgktitgatfqWgykfnllDtpGlhrqedydalrrlyypevlsslev
                   i +dg           y++ + D +G   ++ +          v+++++v
    KIAA1099   171 IVVDGQS---------YLLLIRDEGG-PPEAQF-------AMWVDAVIFV 203  

                   ldlvilvldvedglekdtkeiihhadkygvpillvgnkidlkdekpgyfv
                   ++l    ++++ +   ++  + +++ ++++p++lvg++  + +++    v
    KIAA1099   204 FSLEDE-ISFQTVY-HYYSRMANYRNTSEIPLVLVGTQDAISSAN--PRV 249  

                   dlkphlaslfaklngephfiplsaetgkgidslfglvea<-*
                     +   ++l + l+ ++ + ++ a  g +++ +f+ v     
    KIAA1099   250 IDDARARKLSNDLKRCT-YYETCATYGLNVERVFQDVAQ    287  

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