hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-16440877/chunk_1/iprscan-20080501-16440877.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1077 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00884.13.fs Sulfatase 153.6 8.9e-44 1 PF00884.13.ls Sulfatase 131.4 2.3e-36 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00884.13.ls 1/1 1 759 [. 1 405 [] 131.4 2.3e-36 PF00884.13.fs 1/1 20 759 .. 44 405 .] 153.6 8.9e-44 Alignments of top-scoring domains: PF00884.13.ls: domain 1 of 1, from 1 to 759: score 131.4, E = 2.3e-36 *->kppNvvlilgESfradrrlpnmglyGyprpttPfLsdklaqdeegll + + +++ + +r + +g + KIAA1077 1 -----------DVELG----SLQVMNKTRKI---ME------HGGAT 23 FsnfysgapgTapSlfalLtglppsnlgvtvstpyqqgyks.pgydiqlp F n++++ p+++pS+ ++Ltg + +n++v+++ ++ s+p+ +q + KIAA1077 24 FINAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENC----SsPS--WQAM 67 rtepnlpdlLkqaGYrTgfigkwhlswysrqtvykgkktsFlPtnlGFdk +++ +++ L++ GYrT+f+gk+ + +++ KIAA1077 68 HEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYI------------------ 99 figrnalsdlyanpsdseynl.g............ggvsDealldkaldl + g+ +++ l++n ++ y+ +++ +++++ + + + +++++++++++ KIAA1077 100 PPGWREWLGLIKNSRFYNYTVcRngikekhgfdyaKDYFTDLITNESINY 149 L...alqkndkPfFivlhtlgsHaigpp..iPyypdrypekfatfqptce ++ ++ +++P ++v++ ++H+ p ++ P++++ yp++ +q+ ++ KIAA1077 150 FkmsKRMYPHRPVMMVISHAAPHG--PEdsAPQFSKLYPNA---SQHITP 194 ekers.cske..................rqslnnYlnavaytDdligrvl +++ ++++ + + +++ + + + + +++l+++ +Dd ++r++ KIAA1077 195 SYNYApNMDKhwimqytgpmlpihmeftNILQRKRLQTLMSVDDSVERLY 244 ekLeksglldnTlvvytSDHGpslgetggggylrggktnayeggyrvPll ++L + g l+nT+++yt+DHG+++ g+ l gk+ y++++rvP++ KIAA1077 245 NMLVETGELENTYIIYTADHGYHI----GQFGLVKGKSMPYDFDIRVPFF 290 iwspggkakkhpedvqcikgqknkalvscihvDlfpTiLdlaGikktidv i++p +++ ++ + v +Dl+pTiLd aG+ d+ KIAA1077 291 IRGPSVEPG-----------SIVPQIVL--NIDLAPTILDIAGL----DT 323 plyyadltpppsnpqagpkdllldgrdtlaileg................ p+ +dg++ l+ l++++++++ +++++ + KIAA1077 324 PP-------------------DVDGKSVLKLLDPekpgnrfrtnkkakiw 354 .................................................. +++ ++++ +++++++++ +++++ ++ ++ ++ ++ + ++ +++ KIAA1077 355 rdtflvergkflrkkeesskniqqsnhlpkyervkelcqqaryqtaceqp 404 .................................................. +++ + ++++++ + ++ +++++ + ++++++ ++ ++++++ + + KIAA1077 405 gqkwqciedtsgklrihkckgpsdlltvrqstrnlyargfhdkdkecscr 454 .................................................. +++ + ++++++++++ +++++++ +++ +++++++ + + +++ + KIAA1077 455 esgyrasrsqrksqrqflrnqgtpkykprfvhtrqtrslsvefegeiydi 504 .................................................. + +++++ + ++++ ++++++++++++ + ++++++++ ++++ + KIAA1077 505 nleeeeelqvlqprniakrhdeghkgprdlqassggnrgrmladssnavg 554 .................................................. ++++ + +++ ++++ + +++ ++ + ++++ +++ + +++ KIAA1077 555 ppttvrvthkcfilpndsihcerelyqsarawkdhkayidkeiealqdki 604 .................................................. ++ ++ +++ +++++++ + ++++ +++++ +++++ +++ ++ ++ + KIAA1077 605 knlrevrghlkrrkpeecscskqsyynkekgvkkqeklkshlhpfkeaaq 654 .................................................. + +++ + ++++++++++++++++++++++ + ++ + ++++++ ++ KIAA1077 655 evdsklqlfkennrrrkkerkekrrqrkgeecslpgltcfthdnnhwqta 704 ...........................................Ydltadp + + ++ +++++++ ++ +++++ + ++ + +d+++dp KIAA1077 705 pfwnlgsfcactssnnntywclrtvnethnflfcefatgfleyFDMNTDP 754 gelen<-* ++l n KIAA1077 755 YQLTN 759 PF00884.13.fs: domain 1 of 1, from 20 to 759: score 153.6, E = 8.9e-44 *->egllFsnfysgapgTapSlfalLtglppsnlgvtvstpyqqgyks.p +g +F n++++ p+++pS+ ++Ltg + +n++v+++ ++ s+p KIAA1077 20 GGATFINAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENC----SsP 62 gydiqlprtepnlpdlLkqaGYrTgfigkwhlswysrqtvykgkktsFlP + +q ++++ +++ L++ GYrT+f+gk+ + +++ KIAA1077 63 S--WQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYI----------- 99 tnlGFdkfigrnalsdlyanpsdseynl.g............ggvsDeal + g+ +++ l++n ++ y+ +++ +++++ + + + ++++ KIAA1077 100 -------PPGWREWLGLIKNSRFYNYTVcRngikekhgfdyaKDYFTDLI 142 ldkaldlL...alqkndkPfFivlhtlgsHaigpp..iPyypdrypekfa +++++++++ ++ +++P ++v++ ++H+ p ++ P++++ yp++ KIAA1077 143 TNESINYFkmsKRMYPHRPVMMVISHAAPHG--PEdsAPQFSKLYPNA-- 188 tfqptceekers.cske..................rqslnnYlnavaytD +q+ +++++ ++++ + + +++ + + + + +++l+++ +D KIAA1077 189 -SQHITPSYNYApNMDKhwimqytgpmlpihmeftNILQRKRLQTLMSVD 237 dligrvlekLeksglldnTlvvytSDHGpslgetggggylrggktnayeg d ++r++++L + g l+nT+++yt+DHG+++ g+ l gk+ y++ KIAA1077 238 DSVERLYNMLVETGELENTYIIYTADHGYHI----GQFGLVKGKSMPYDF 283 gyrvPlliwspggkakkhpedvqcikgqknkalvscihvDlfpTiLdlaG ++rvP++i++p +++ ++ + v +Dl+pTiLd aG KIAA1077 284 DIRVPFFIRGPSVEPG-----------SIVPQIVL--NIDLAPTILDIAG 320 ikktidvplyyadltpppsnpqagpkdllldgrdtlaileg......... + d+p+ +dg++ l+ l++++++++ ++ KIAA1077 321 L----DTPP-------------------DVDGKSVLKLLDPekpgnrfrt 347 .................................................. +++ + +++ ++++ +++++++++ +++++ ++ ++ ++ ++ + KIAA1077 348 nkkakiwrdtflvergkflrkkeesskniqqsnhlpkyervkelcqqary 397 .................................................. ++ ++++++ + ++++++ + ++ +++++ + ++++++ ++ +++ KIAA1077 398 qtaceqpgqkwqciedtsgklrihkckgpsdlltvrqstrnlyargfhdk 447 .................................................. +++ + ++++ + ++++++++++ +++++++ +++ +++++++ + + KIAA1077 448 dkecscresgyrasrsqrksqrqflrnqgtpkykprfvhtrqtrslsvef 497 .................................................. +++ + + +++++ + ++++ ++++++++++++ + ++++++++ KIAA1077 498 egeiydinleeeeelqvlqprniakrhdeghkgprdlqassggnrgrmla 547 .................................................. ++++ +++++ + +++ ++++ + +++ ++ + ++++ +++ KIAA1077 548 dssnavgppttvrvthkcfilpndsihcerelyqsarawkdhkayidkei 597 .................................................. + +++ ++ ++ +++ +++++++ + ++++ +++++ +++++ +++ + KIAA1077 598 ealqdkiknlrevrghlkrrkpeecscskqsyynkekgvkkqeklkshlh 647 .................................................. + ++ ++ +++ + ++++++++++++++++++++++ + ++ + +++ KIAA1077 648 pfkeaaqevdsklqlfkennrrrkkerkekrrqrkgeecslpgltcfthd 697 .................................................. +++ ++ + + ++ +++++++ ++ +++++ + ++ + KIAA1077 698 nnhwqtapfwnlgsfcactssnnntywclrtvnethnflfcefatgfley 747 Ydltadpgelen<-* +d+++dp++l n KIAA1077 748 FDMNTDPYQLTN 759 //