hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16355049/chunk_1/iprscan-20080501-16355049.nocrc
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Query sequence: KIAA1072
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00481.12.ls Protein phosphatase 2C                         263.8    3.2e-76   1
PF00481.12.fs Protein phosphatase 2C                         262.0    1.1e-75   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00481.12.fs   1/1     234   485 ..     1   303 []   262.0  1.1e-75
PF00481.12.ls   1/1     234   485 ..     1   303 []   263.8  3.2e-76

Alignments of top-scoring domains:
PF00481.12.fs: domain 1 of 1, from 234 to 485: score 262.0, E = 1.1e-75
                   *->ldvgvsrmqgwrksmeDahialknlnsss..sgkdsisffavfDghg
                      ++ +++++ + r++meD h++++++n  ++ +++++ ++favfDghg
    KIAA1072   234    YETSIHAIKNMRRKMEDKHVCIPDFNMLFnlEDQEEQAYFAVFDGHG 280  

                   GsqaakyagkhlekaltilaerksfpegnpnEwklsdledalrksflead
                   G++aa ya+ hl+     l ++++fp +         + +al  +f+   
    KIAA1072   281 GVDAAIYASIHLH---VNLVRQEMFPHD---------PAEALCRAFRV-- 316  

                   tdeelrsaadsanhvltkedlssGsTAvvalirgqkklLyvANvGDSrav
                   tde + +  ++a+     e l++G+T vv +irg+   L+vA+vGDS+++
    KIAA1072   317 TDERFVQ--KAAR-----ESLRCGTTGVVTFIRGNM--LHVAWVGDSQVM 357  

                   LcrngnaiklvtqLtedHkpsdedEkrRIeaaGGfvsrvsgngRvnGvfL
                   L r+g+a+    +L++ Hkp++edEk RIea+GG v +    +RvnG+ L
    KIAA1072   358 LVRKGQAV----ELMKPHKPDREDEKQRIEALGGCVVWFG-AWRVNGS-L 401  

                   avSRAfGDfelKpnvtlgpelslerGifseeqpVsaePdvtsstkitesk
                   +vSRA+GD e Kp                   ++  + d   st ++   
    KIAA1072   402 SVSRAIGDAEHKP-------------------YICGDADSA-STVLDGT- 430  

                   DeFliLAcDGlWDvvsdqeavdivrselsdgn.ksagspmeaaekLvdeA
                   +++liLAcDG++D v+++eav +v ++l+++n++s    +++a kLv  A
    KIAA1072   431 EDYLILACDGFYDTVNPDEAVKVVSDHLKENNgDS----SMVAHKLVASA 476  

                   iargseDni<-*
                   ++ gs+Dni   
    KIAA1072   477 RDAGSSDNI    485  

PF00481.12.ls: domain 1 of 1, from 234 to 485: score 263.8, E = 3.2e-76
                   *->ldvgvsrmqgwrksmeDahialknlnsss..sgkdsisffavfDghg
                      ++ +++++ + r++meD h++++++n  ++ +++++ ++favfDghg
    KIAA1072   234    YETSIHAIKNMRRKMEDKHVCIPDFNMLFnlEDQEEQAYFAVFDGHG 280  

                   GsqaakyagkhlekaltilaerksfpegnpnEwklsdledalrksflead
                   G++aa ya+ hl+     l ++++fp +         + +al  +f+   
    KIAA1072   281 GVDAAIYASIHLH---VNLVRQEMFPHD---------PAEALCRAFRV-- 316  

                   tdeelrsaadsanhvltkedlssGsTAvvalirgqkklLyvANvGDSrav
                   tde + +  ++a+     e l++G+T vv +irg+   L+vA+vGDS+++
    KIAA1072   317 TDERFVQ--KAAR-----ESLRCGTTGVVTFIRGNM--LHVAWVGDSQVM 357  

                   LcrngnaiklvtqLtedHkpsdedEkrRIeaaGGfvsrvsgngRvnGvfL
                   L r+g+a+    +L++ Hkp++edEk RIea+GG v +    +RvnG+ L
    KIAA1072   358 LVRKGQAV----ELMKPHKPDREDEKQRIEALGGCVVWFG-AWRVNGS-L 401  

                   avSRAfGDfelKpnvtlgpelslerGifseeqpVsaePdvtsstkitesk
                   +vSRA+GD e Kp                   ++  + d   st ++   
    KIAA1072   402 SVSRAIGDAEHKP-------------------YICGDADSA-STVLDGT- 430  

                   DeFliLAcDGlWDvvsdqeavdivrselsdgn.ksagspmeaaekLvdeA
                   +++liLAcDG++D v+++eav +v ++l+++n++s    +++a kLv  A
    KIAA1072   431 EDYLILACDGFYDTVNPDEAVKVVSDHLKENNgDS----SMVAHKLVASA 476  

                   iargseDni<-*
                   ++ gs+Dni   
    KIAA1072   477 RDAGSSDNI    485  

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