hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15533964/chunk_1/iprscan-20080501-15533964.nocrc
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Query sequence: KIAA1047
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00717                                                 101.8    7.9e-26   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00717    1/2     447   495 ..     1    53 []    39.4  4.8e-07
SM00717    2/2     635   683 ..     1    53 []    62.4  5.8e-14

Alignments of top-scoring domains:
SM00717: domain 1 of 2, from 447 to 495: score 39.4, E = 4.8e-07
                   *->kkgeWteeEdelLleavkkyGkgtdndWakIakelpgRtpkqcrerw
                        + Wt+ E e++++   +++    +++ +Ia++l  +++ +c++++
    KIAA1047   447    FMNVWTDHEKEIFKDKFIQHP----KNFGLIASYLERKSVPDCVLYY 489  

                   rnllkp<-*
                   +  +k    
    KIAA1047   490 YLTKKN    495  

SM00717: domain 2 of 2, from 635 to 683: score 62.4, E = 5.8e-14
                   *->kkgeWteeEdelLleavkkyGkgtdndWakIakelpgRtpkqcrerw
                      +  +WteeE e  ++++ ++G    ++Wa+Iak+++++++ qc++++
    KIAA1047   635    ETSRWTEEEMEVAKKGLVEHG----RNWAAIAKMVGTKSEAQCKNFY 677  

                   rnllkp<-*
                    n++++   
    KIAA1047   678 FNYKRR    683  

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