hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18363492/chunk_1/iprscan-20080502-18363492.nocrc
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Query sequence: KIAA0981
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00330                                                 552.6   1.6e-161   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00330    1/1     271   565 ..     1   438 []   552.6 1.6e-161

Alignments of top-scoring domains:
SM00330: domain 1 of 1, from 271 to 565: score 552.6, E = 1.6e-161
                   *->lpsdfkakekikfptpgsgleltPshgsadFkfKdYcPevFRaLRev
                      ++++++ ++++k+ ++++ +el++s+ +a+F+++ Y++ +F+++Rev
    KIAA0981   271    QDEVDGGDTQKKQLINPH-VELQFSDANAKFYCRLYYAGEFHKMREV 316  

                   LfgidpaDylrSLcrsplLlelssgGKSGSfFylSqDDRFiIKtlsksEi
                   + + +++D++rSL++s++  ++++gGKSG++Fy ++DDRFi+K++++ E+
    KIAA0981   317 ILDSSEEDFIRSLSHSSP--WQARGGKSGAAFYATEDDRFILKQMPRLEV 364  

                   kvllkFApmLpnYyehvvqnpgnTLLpKffGlyrVkvkgstsntgkKirf
                   +++l+FAp+++nY++++vq++++T+L+K++G+yr+++k+s++nt+kK ++
    KIAA0981   365 QSFLDFAPHYFNYITNAVQQKRPTALAKILGVYRIGYKNSQNNTEKKLDL 414  

                   lVMeNLFyselkihrkYDLKGStrgReaskdeaikqkentvLKDlDlvee
                   lVMeNLFy ++k+ +++DLKGS+r+R++++d+ +k+++++vL+D++l+++
    KIAA0981   415 LVMENLFY-GRKMAQVFDLKGSLRNRNVKTDT-GKESCDVVLLDENLLKM 462  

                   iynqpiyvdplakkaLlkqikrDceFLeslkIMDYSLLVGIhdkesgqre
                   ++++p+y+++++k +L+++i+ D++FL+s++I+DYSLLVG++d+++    
    KIAA0981   463 VRDNPLYIRSHSKAVLRTSIHSDSHFLSSHLIIDYSLLVGRDDTSN---- 508  

                   eielepnyssdeesssessaslkqektassspdrsstamyscvpsrdSve
                                                                     
    KIAA0981     - -------------------------------------------------- -    

                   sesSvaiqsvtsssarqalvststaseditgellvsdetdidvpfggnip
                                                                     
    KIAA0981     - -------------------------------------------------- -    

                   arairaerrrverkeiedkeesatkegenEaydvvLylGIIDiLqtYtld
                                                     +L++GIID+++t+t+d
    KIAA0981   509 ----------------------------------ELVVGIIDYIRTFTWD 524  

                   KKLEHavKsighdgGkgktiSvVsPeqYskRFrdFmdkyFl<-*
                   KKLE++vKs+g++gG+gk+++vVsPe+Y++RF+++mdkyFl   
    KIAA0981   525 KKLEMVVKSTGILGGQGKMPTVVSPELYRTRFCEAMDKYFL    565  

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