hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18263366/chunk_1/iprscan-20080502-18263366.nocrc
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Query sequence: KIAA0975
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00312                                                 104.9      9e-27   1
SM00365                                                  63.6    2.5e-14   5
SM00369                                                  25.2     0.0089   4

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00312      1/1      38   142 ..     1   142 []   104.9    9e-27
SM00365      1/5     310   328 ..     1    22 []     6.8  1.2e+02
SM00369      1/4     310   332 ..     1    24 []     4.2  1.3e+02
SM00365      2/5     333   354 ..     1    22 []     7.5       99
SM00365      3/5     355   376 ..     1    22 []    24.1    0.019
SM00369      2/4     355   377 ..     1    24 []    12.9       11
SM00365      4/5     378   399 ..     1    22 []     9.9       50
SM00369      3/4     378   399 ..     1    24 []     2.9  1.8e+02
SM00365      5/5     400   421 ..     1    22 []    15.4      8.3
SM00369      4/4     400   425 ..     1    24 []     5.2       96

Alignments of top-scoring domains:
SM00312: domain 1 of 1, from 38 to 142: score 104.9, E = 9e-27
                   *->dniaivavveeetsgkkrgdgkhyyyvieietstnedveewtvyRRY
                      ++ +++ vv+ e          ++y+v++i++ ++   +ewtv++RY
    KIAA0975    38    EPAKEARVVGSE--------LVDTYTVYIIQVTDGS--HEWTVKHRY 74   

                   sdFleLhskLlkkfpqekrrriiPplPekkllgryreraekesmkvkksl
                   sdF++Lh+kL ++++     +    lP+kk++g+                
    KIAA0975    75 SDFHDLHEKLVAERK-----IDKNLLPPKKIIGK---------------- 103  

                   nnfseefiekRrrgLerYLqkllnhPelinhyrvsevvleFLess<-*
                     +s++++ekR ++Le YLqkll + + ++      v+++FL+++   
    KIAA0975   104 --NSRSLVEKREKDLEVYLQKLLAAFPGVT----PRVLAHFLHFH    142  

SM00365: domain 1 of 5, from 310 to 328: score 6.8, E = 1.2e+02
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                       + L++LdLs+N I   + +de   
    KIAA0975   310    WQALTTLDLSHNSI---SEIDE    328  

SM00369: domain 1 of 4, from 310 to 332: score 4.2, E = 1.3e+02
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                        +L++LdLs+N ++++ + +      
    KIAA0975   310    WQALTTLDLSHNSISEIDESV-KL    332  

SM00365: domain 2 of 5, from 333 to 354: score 7.5, E = 99
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                        + e LdLs+N++  ++NL +   
    KIAA0975   333    IPKIEFLDLSHNGLLVVDNLQH    354  

SM00365: domain 3 of 5, from 355 to 376: score 24.1, E = 0.019
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                      L nL++LdLs Nk++++E+L++   
    KIAA0975   355    LYNLVHLDLSYNKLSSLEGLHT    376  

SM00369: domain 2 of 4, from 355 to 377: score 12.9, E = 11
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L nL +LdLs+N+L+sL +g+      
    KIAA0975   355    LYNLVHLDLSYNKLSSL-EGLHTK    377  

SM00365: domain 4 of 5, from 378 to 399: score 9.9, E = 50
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                      L n ++L L +N+++++++L++   
    KIAA0975   378    LGNIKTLNLAGNLLESLSGLHK    399  

SM00369: domain 3 of 4, from 378 to 399: score 2.9, E = 1.8e+02
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+n ++L+L +N L+sL  g+ +    
    KIAA0975   378    LGNIKTLNLAGNLLESLS-GL-HK    399  

SM00365: domain 5 of 5, from 400 to 421: score 15.4, E = 8.3
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                      L  L++LdL++N+I+++E +     
    KIAA0975   400    LYSLVNLDLRDNRIEQMEEVRS    421  

SM00369: domain 4 of 4, from 400 to 425: score 5.2, E = 96
                   *->LpnLreLdLsnNqLtsLP..pgaFqg<-*
                      L +L  LdL +N++++  + + + +    
    KIAA0975   400    LYSLVNLDLRDNRIEQMEevRSIGSL    425  

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