hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17052531/chunk_1/iprscan-20080502-17052531.nocrc
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Query sequence: KIAA0929
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07744.3.ls SPOC domain                                    173.6    4.7e-49   1
PF07744.3.fs SPOC domain                                    171.6    1.8e-48   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07744.3.fs   1/1    1508  1629 ..     1   131 []   171.6  1.8e-48
PF07744.3.ls   1/1    1508  1629 ..     1   131 []   173.6  4.7e-49

Alignments of top-scoring domains:
PF07744.3.fs: domain 1 of 1, from 1508 to 1629: score 171.6, E = 1.8e-48
                   *->WkGlLalksvadfpikahfvsGdilKeidekvldklLPdedtgpqlr
                      W+GlLalk+ + +++++hfvsG      ++  ++ +LP +++gp lr
    KIAA0929  1508    WQGLLALKN-DTAAVQLHFVSG------NNVLAHRSLPLSEGGPPLR 1547 

                   itgRlrldqvkkylvklrisvtkPNevavvlflPssedisdvssedtnll
                   i++R+rl+  ++++v++r++v++  +++++l+lP+++d++dv+s++++l+
    KIAA0929  1548 IAQRMRLEATQLEGVARRMTVET--DYCLLLALPCGRDQEDVVSQTESLK 1595 

                   relvsYLksKqraGvislpergskqngrdlyifP<-*
                   + +++YL++Kq+aG+i++p++gs+q++++l+ifP   
    KIAA0929  1596 AAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFP    1629 

PF07744.3.ls: domain 1 of 1, from 1508 to 1629: score 173.6, E = 4.7e-49
                   *->WkGlLalksvadfpikahfvsGdilKeidekvldklLPdedtgpqlr
                      W+GlLalk+ + +++++hfvsG      ++  ++ +LP +++gp lr
    KIAA0929  1508    WQGLLALKN-DTAAVQLHFVSG------NNVLAHRSLPLSEGGPPLR 1547 

                   itgRlrldqvkkylvklrisvtkPNevavvlflPssedisdvssedtnll
                   i++R+rl+  ++++v++r++v++  +++++l+lP+++d++dv+s++++l+
    KIAA0929  1548 IAQRMRLEATQLEGVARRMTVET--DYCLLLALPCGRDQEDVVSQTESLK 1595 

                   relvsYLksKqraGvislpergskqngrdlyifP<-*
                   + +++YL++Kq+aG+i++p++gs+q++++l+ifP   
    KIAA0929  1596 AAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFP    1629 

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