hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16583850/chunk_1/iprscan-20080502-16583850.nocrc
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Query sequence: KIAA0925
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                  97.4    1.6e-24   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/4      72   115 ..     1    46 []    31.1  0.00016
SM00320    2/4     125   165 ..     1    46 []    28.6  0.00087
SM00320    3/4     168   207 ..     1    46 []    31.2  0.00014
SM00320    4/4     210   253 ..     1    46 []     6.6       45

Alignments of top-scoring domains:
SM00320: domain 1 of 4, from 72 to 115: score 31.1, E = 0.00016
                   *->t.kllrtlk...gHtgespVtsvafspdggssdspnllasgs.Dgti
                      t++    +++  gH+g   V++++++p       +n++as+s+D ++
    KIAA0925    72    TgRIEPNYPkvcGHQG--NVLDIKWNPFI-----DNIIASCSeDTSV 111  

                   rlWd<-*
                   r+W+   
    KIAA0925   112 RIWE    115  

SM00320: domain 2 of 4, from 125 to 165: score 28.6, E = 0.00087
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       ++ l +l+gH+   +V  v ++p+      +n+l+s++ D ++ +W
    KIAA0925   125    MtEALLELHGHSR--RVGLVEWHPTT-----NNILFSAGyDYKVLIW 164  

                   d<-*
                   +   
    KIAA0925   165 N    165  

SM00320: domain 3 of 4, from 168 to 207: score 31.2, E = 0.00014
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +++++ +++Ht+   +++++f+ dg      +ll + ++D+++r+ 
    KIAA0925   168    VgEPVKMIDCHTD--VILCMSFNTDG------SLLTTTCkDKKLRVI 206  

                   d<-*
                   +   
    KIAA0925   207 E    207  

SM00320: domain 4 of 4, from 210 to 253: score 6.6, E = 45
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.Dgt....
                      ++++l++ ++ ++  +V+ v f  +       ++l++ +  + ++++
    KIAA0925   210    SgRVLQEANCKNH--RVNRVVFLGNM------KRLLTTGvSRWntrq 248  

                   irlWd<-*
                   i lWd   
    KIAA0925   249 IALWD    253  

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