hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16164985/chunk_1/iprscan-20080502-16164985.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0900
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02205.10.fs WH2 motif                                       31.9    3.9e-08   1
PF02205.10.ls WH2 motif                                       33.8    5.7e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02205.10.fs   1/1     441   458 ..     1    21 []    31.9  3.9e-08
PF02205.10.ls   1/1     441   458 ..     1    21 []    33.8  5.7e-07

Alignments of top-scoring domains:
PF02205.10.fs: domain 1 of 1, from 441 to 458: score 31.9, E = 3.9e-08
                   *->aRsaLLaaIrsagqGikLKKv<-*
                      aRs+LLaaIr    Gi+LKKv   
    KIAA0900   441    ARSDLLAAIR---MGIQLKKV    458  

PF02205.10.ls: domain 1 of 1, from 441 to 458: score 33.8, E = 5.7e-07
                   *->aRsaLLaaIrsagqGikLKKv<-*
                      aRs+LLaaIr    Gi+LKKv   
    KIAA0900   441    ARSDLLAAIR---MGIQLKKV    458  

//