hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-15270811/chunk_1/iprscan-20080502-15270811.nocrc
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Query sequence: KIAA0871
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00593                                                  97.3    1.8e-24   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00593     1/1     165   227 ..     1    68 []    97.3  1.8e-24

Alignments of top-scoring domains:
SM00593: domain 1 of 1, from 165 to 227: score 97.3, E = 1.8e-24
                   *->frAwirlaLneklLsswLnlLlsdrkllskyYepwAflrsaeadpee
                      +rAw+rlaL++k+Ls+++++L+++ +lls++Yep+A+++      ee
    KIAA0871   165    GRAWLRLALMQKKLSEYMKALINKKELLSEFYEPNALMME-----EE 206  

                   geqlltlLqgLsaldfnlpvd<-*
                   g+++++lL+gL+++d n++++   
    KIAA0871   207 GAIIAGLLVGLNVIDANFCMK    227  

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