hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14312020/chunk_1/iprscan-20080502-14312020.nocrc
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Query sequence: KIAA0838
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                  33.3    3.3e-05   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/2     593   623 ..     1    30 []    28.3   0.0011
SM00248    2/2     627   656 ..     1    30 []     5.0    1e+03

Alignments of top-scoring domains:
SM00248: domain 1 of 2, from 593 to 623: score 28.3, E = 0.0011
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      d rT+LH+Aa++g++evvk+Ll++   ++     
    KIAA0838   593    DSRTALHVAAAEGHVEVVKFLLEACKvNPFP    623  

SM00248: domain 2 of 2, from 627 to 656: score 5.0, E = 1e+03
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       ++Tp+  A   g+++v k+L ++ +  +    
    KIAA0838   627    WNNTPMDEALHFGHHDVFKILQEYQVQYTP    656  

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