hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14143684/chunk_1/iprscan-20080502-14143684.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0828
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00936 ahcY: adenosylhomocysteinase                   652.5   1.1e-193   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00936   1/1     194   611 ..     1   422 []   652.5 1.1e-193

Alignments of top-scoring domains:
TIGR00936: domain 1 of 1, from 194 to 611: score 652.5, E = 1.1e-193
                   *->YkvkDisLAaeGrkkIewAereMPVLmriReefseekPLkGvriaac
                      ++vk i  A++Gr++Ie+Ae+eMP Lm++R++ + ekPL+G++i++c
    KIAA0828   194    FCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGC 240  

                   LHltvkTAvLieTLkagGAEValtacNplSTQDdvAAAlakaaGipVyAw
                    H+t++TAvL+eTL a+GA  +++acN++ST  +vAAAla+ +G pV+Aw
    KIAA0828   241 THITAQTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAE-SGFPVFAW 289  

                   rGetnEeYyealeqvldafkddkepniiiDDGaDlifLlhkeerpellek
                   +Ge++ ++++++ + +    ++ +pn+i+DDG+Dl+  + k ++p +  k
    KIAA0828   290 KGESEDDFWWCIDRCVN--VEGWQPNMILDDGGDLTHWIYK-KYPNMFKK 336  

                   iiGgsEETTTGVirLramereGvLkfPviaVNDayTKylFDNrYGTGqSt
                   i+G+ EE  TGV+rL+++ ++G+L +P+++VND++TK +FDN+Y +++S 
    KIAA0828   337 IKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESI 386  

                   iDGIlRATnlLiAGKtvVVaGYGWcGkGiAmrarGlGArViVTEvDPIrA
                   +DG +R+T+++ +GK vVV+GYG +GkG+ ++++ +G  V VTE+DPI A
    KIAA0828   387 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICA 436  

                   LeAaMDGFrVmtmeeAakiGDifiTaTGnkdvIreeHfekMKDgAIlaNa
                   L+A MDGFr +++ e + + Di+iT TGnk+v+ +eH+  MK+ +I++N 
    KIAA0828   437 LQACMDGFRLVKLNEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNM 486  

                   GHFdvEIdvkaLeelAkekrevrpqvdeYkLkdGrriyLLaEGRLVNLaa
                   GH + EIdv++L     +  +vr qvd  + +dG+ri LLaEGRL+NL +
    KIAA0828   487 GHSNTEIDVASLRTPELTWERVRSQVDHVIWPDGKRIVLLAEGRLLNLSC 536  

                   AeGHPseVMdmSFanQalAaeyllkn.hdklepgVyrlPkelDemVArlk
                    +  P +V +   + QalA ++l   +++++ + Vy lPk++De VA+l+
    KIAA0828   537 ST-VPTFVLSITATTQALALIELYNApEGRYKQDVYLLPKKMDEYVASLH 585  

                   LealGieideLTeeQkkYLesweeGt<-*
                   L +   +++eLT eQ+kYL+  ++G+   
    KIAA0828   586 LPTFDAHLTELTDEQAKYLGLNKNGP    611  

//