hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14061346/chunk_1/iprscan-20080502-14061346.nocrc
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Query sequence: KIAA0823
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 124.4    1.3e-32   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/5      78   107 ..     1    30 []     5.0  9.9e+02
SM00248    2/5     111   140 ..     1    30 []    35.2    9e-06
SM00248    3/5     144   173 ..     1    30 []    33.4  3.1e-05
SM00248    4/5     239   268 ..     1    30 []    22.1    0.076
SM00248    5/5     272   301 ..     1    30 []    28.6  0.00083

Alignments of top-scoring domains:
SM00248: domain 1 of 5, from 78 to 107: score 5.0, E = 9.9e+02
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +   +L  A  +++ e v+++l++++++++   
    KIAA0823    78    EASVALLEASLRNDAEEVRYFLKNKVSPDL    107  

SM00248: domain 2 of 5, from 111 to 140: score 35.2, E = 9e-06
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG T+LH ++  + +e+vklLl++ga++na   
    KIAA0823   111    DGLTALHQCCIDNFEEIVKLLLSHGANVNA    140  

SM00248: domain 3 of 5, from 144 to 173: score 33.4, E = 3.1e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      + +TpLH Aa  g++++vk+L+++gad+ a   
    KIAA0823   144    ELWTPLHAAATCGHINLVKILVQYGADLLA    173  

SM00248: domain 4 of 5, from 239 to 268: score 22.1, E = 0.076
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G T LH+A +ng+l  ++lLld+g+ +++   
    KIAA0823   239    QGATLLHIAGANGYLRAAELLLDHGVRVDV    268  

SM00248: domain 5 of 5, from 272 to 301: score 28.6, E = 0.00083
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+ pLH Aa +g++ +++lL+++ga++ a   
    KIAA0823   272    DGWEPLHAAAFWGQMQMAELLVSHGASLSA    301  

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