# /usr/local/bin/fasta34 -b50 -d10 -E0.01 -H -O./tmp/hh02763s1.fasta.huge -Q ../query/KIAA0823.ptfa ./tmplib.23663 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0823, 578 aa vs ./tmplib.23663 library 1986927 residues in 2037 sequences Expectation_n fit: rho(ln(x))= 6.5146+/-0.00562; mu= 5.6725+/- 0.379 mean_var=136.8364+/-34.203, 0's: 0 Z-trim: 25 B-trim: 123 in 1/39 Lambda= 0.109641 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2037) KIAA0865 ( 1900 res) hk06640y1 (1900) 529 95.9 3e-20 KIAA0379 ( 1059 res) hh00505s1 (1059) 293 58.3 3.4e-09 KIAA0771 ( 948 res) hk05113 ( 948) 274 55.3 2.6e-08 KIAA1250 ( 1777 res) pf01137 (1777) 261 53.5 1.7e-07 KIAA0697 ( 2486 res) hk04486s1 (2486) 261 53.6 2.1e-07 KIAA1561 ( 1416 res) fh20178s1 (1416) 221 47.1 1.1e-05 KIAA1223 ( 1089 res) pg00513 (1089) 215 46.0 1.8e-05 KIAA1876 ( 803 res) pf01162s1 ( 803) 188 41.6 0.00028 KIAA1255 ( 1232 res) hh14633s1 (1232) 188 41.8 0.00038 KIAA0946 ( 667 res) hj04787 ( 667) 181 40.4 0.00053 KIAA1334 ( 989 res) fh15842 ( 989) 182 40.7 0.00063 KIAA0396 ( 627 res) hg00180s1 ( 627) 169 38.5 0.0019 KIAA1758 ( 1662 res) fh20539(revised) (1662) 172 39.4 0.0027 KIAA0957 ( 693 res) hj05670 ( 693) 165 37.9 0.0032 KIAA0050 ( 796 res) ha01557 ( 796) 159 37.0 0.0068 KIAA1981 ( 862 res) fk03148(revised) ( 862) 159 37.0 0.0071 KIAA1636 ( 1864 res) ff02660 (1864) 162 37.8 0.0089 >>KIAA0865 ( 1900 res) hk06640y1 (1900 aa) initn: 486 init1: 259 opt: 529 Z-score: 455.3 bits: 95.9 E(): 3e-20 Smith-Waterman score: 529; 29.231% identity (63.077% similar) in 325 aa overlap (14-337:40-361) 10 20 30 40 KIAA08 PPARALGRAVAMASHVDLLTELQLLEKVPTLERLRAAQKRRAQ :: .. . :::..: .: : ... : . KIAA08 RGEISKGCIFLLVGASHPHCGCFQLCNVFRSH-EMEIDQCLLESLPLGQRQRLVKRMRCE 10 20 30 40 50 60 50 60 70 80 90 100 KIAA08 QLKKWAQYEQDLQHRKRKHERKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKV :.: : ::.. .:.. :: .. :: :. . : .: .... .:: .::. . KIAA08 QIK--AYYEREKAFQKQEGFLKRLKHAKNPKVHFNLTDMLQDAIIHHNDKEVLRLLKEGA 70 80 90 100 110 120 110 120 130 140 150 160 KIAA08 SPDLCNEDGLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPLHAAATCGHINLVKI .: .: . :: : . :...:...:.::: .:...:::.: : .: . ..: . KIAA08 DPHTLVSSGGSLLHLCARYDNAFIAEILIDRGVNVNHQDEDFWTPMHIACACDNPDIVLL 130 140 150 160 170 180 170 180 190 200 210 220 KIAA08 LVQYGADLLAVNSDGNMPYDLC-EDEPTLDVIETCMAYQGITQEKINEMRVAPEQQMIAD :: ::..: . .::.: : : . ... : . .:. .. .:.. ..:..: KIAA08 LVLAGANVLLQDVNGNIPLDYAVEGTESSSILLTYLDENGVDLTSLRQMKLQRPMSMLTD 190 200 210 220 230 240 230 240 250 260 270 280 KIAA08 IHCMIAAGQDLDWIDAQGATLLHIAGANGYLRAAELLLDHGVRVDVKDWDGWEPLHAAAF .. ....: ... . .:.::::.: :.:: ... :.:.:: ... : . : ::: :: KIAA08 VKHFLSSGGNVNEKNDEGVTLLHMACASGYKEVVSLILEHGGDLNIVDDQYWTPLHLAAK 250 260 270 280 290 300 290 300 310 320 330 340 KIAA08 WGQMQMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELKHKHDVIMKSQLRHKSS .:: ....::. : :. . .: :. : .. .::. . . :: : KIAA08 YGQTNLVKLLLMHQANPHLVNCNEEKASDIAASEFIEEMLLKAEIAWEEKMKEPLSASTL 310 320 330 340 350 360 350 360 370 380 390 400 KIAA08 LSRRTSSAGSRGKVVRRASLSDRTNLYRKEYEGEAILWQRSAAEDQRTSTYNGDIRETRT KIAA08 AQEEPYEEIIHDLPVLSSKLSPLVLPIAKQDSLLEKDIMFKDATKGLCKQQSQDSIPENP 370 380 390 400 410 420 >>KIAA0379 ( 1059 res) hh00505s1 (1059 aa) initn: 424 init1: 183 opt: 293 Z-score: 256.8 bits: 58.3 E(): 3.4e-09 Smith-Waterman score: 366; 29.832% identity (59.664% similar) in 238 aa overlap (82-312:149-384) 60 70 80 90 100 110 KIAA08 EQDLQHRKRKHERKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKVSPDLCNED :: .:.. . .: :. .:. .. . .. KIAA03 IAAANKAVKCAEALVPLLSNVNVSDRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDKK 120 130 140 150 160 170 120 130 140 150 160 170 KIAA08 GLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPLHAAATCGHINLVKILVQYGADL :.: . :.::::.::::.:. ::.. .:::::::. : :..:: :.. :.:. KIAA03 DRRAIHWAAYMGHIEVVKLLVSHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDM 180 190 200 210 220 230 180 190 200 210 220 KIAA08 LAVNSDGNMPYDL-CEDEPTLDVIETCMAYQGITQEKINEMRVAPEQQMIADIH---CM- :. :: : . : . ::. . . : .. :: .: . :. : :. KIAA03 NEPNAYGNTPLHVACYNGQ--DVVVNELIDCGAIVNQKNEKGFTPLHFAAASTHGALCLE 240 250 260 270 280 290 230 240 250 260 270 280 KIAA08 --IAAGQDLDWIDAQGATLLHIAGANGYLRAAELLLDHGVRVDVKDWDGWEPLHAAAFWG .. : :.. . .: : ::... .: . .. ... :. .: .: .: ::: :: .: KIAA03 LLVGNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYG 300 310 320 330 340 350 290 300 310 320 330 340 KIAA08 QMQMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELKHKHDVIMKSQLRHKSSLS . . . :.. ::. . : .:. : KIAA03 HELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLH 360 370 380 390 400 410 >>KIAA0771 ( 948 res) hk05113 (948 aa) initn: 233 init1: 233 opt: 274 Z-score: 241.2 bits: 55.3 E(): 2.6e-08 Smith-Waterman score: 274; 36.601% identity (64.706% similar) in 153 aa overlap (60-211:729-877) 30 40 50 60 70 80 KIAA08 TLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGRRKKVSFEASVALLEASLR .: . .:. : : : :. . ::.:::. KIAA07 PSPGEEQVPPAPLPPASHPPATSTNKRTNLKKPNSERTGHGLR--VRFNPLALLLDASLE 700 710 720 730 740 750 90 100 110 120 130 140 KIAA08 NDAEEVRYFLKNKVSPDLCNEDGLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPL .. . :. .. . .:. :..:.: ::. . ..:::.::. :.:::: :.. :::: KIAA07 GEFDLVQRIIYEVEDPSKPNDEGITPLHNAVCAGHHHIVKFLLDFGVNVNAADSDGWTPL 760 770 780 790 800 810 150 160 170 180 190 200 KIAA08 HAAATCGHINLVKILVQYGADLLAVN-SDGNMPYDLCEDEPTLDVIETCMAYQGITQEKI : ::.:. ..: : ::. :: ..: . :: . : :: : :. : . .:::. KIAA07 HCAASCNSVHLCKQLVESGAAIFASTISDIETAADKCE-EMEEGYIQ-CSQFLYGVQEKL 820 830 840 850 860 870 210 220 230 240 250 260 KIAA08 NEMRVAPEQQMIADIHCMIAAGQDLDWIDAQGATLLHIAGANGYLRAAELLLDHGVRVDV . : KIAA07 GVMNKGVAYALWDYEAQNSDELSFHEGDALTILRRKDESETEWWWARLGDREGYVPKNLL 880 890 900 910 920 930 >>KIAA1250 ( 1777 res) pf01137 (1777 aa) initn: 455 init1: 150 opt: 261 Z-score: 226.6 bits: 53.5 E(): 1.7e-07 Smith-Waterman score: 261; 27.556% identity (58.667% similar) in 225 aa overlap (82-302:80-304) 60 70 80 90 100 110 KIAA08 EQDLQHRKRKHERKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKVSPDLCNED ::. :: .. .. :. .:: :. . . KIAA12 IAAEQGNLEIVKELIKNGANCNLEDLDNWTALISASKEGHVHIVEELLKCGVNLEHRDMG 50 60 70 80 90 100 120 130 140 150 160 170 KIAA08 GLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPLHAAATCGHINLVKILVQYGADL : ::: : . ..:.:::::::: .. :. :: :: ..:..:.: :: . KIAA12 GWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPIIWAAGRGHADIVHLLLQNGAKV 110 120 130 140 150 160 180 190 200 210 220 KIAA08 LAVNSDGNMPYDLCEDEPTLDVIETCMAYQG-ITQEKINEMR---VAPEQQMIADIHCMI .. :. : . :. .. .:. . . :: : : :: . . ... .. KIAA12 NCSDKYGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEIL 170 180 190 200 210 220 230 240 250 260 270 280 KIAA08 AAGQDLDWIDAQGATLLHIAGANGYLRAAELLLDHGVRVDVKDWDGWEPLHAAAFWGQMQ . ... : .: : : ::. .:. . .. ::: :. :.. : .: : .:. :... KIAA12 KRNPNVNLTDKDGNTALMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVE 230 240 250 260 270 280 290 300 310 320 330 340 KIAA08 MAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELKHKHDVIMKSQLRHKSSLSRRT ... :... :... : KIAA12 IVRALLQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKAT 290 300 310 320 330 340 >>KIAA0697 ( 2486 res) hk04486s1 (2486 aa) initn: 605 init1: 207 opt: 261 Z-score: 224.7 bits: 53.6 E(): 2.1e-07 Smith-Waterman score: 275; 24.679% identity (53.205% similar) in 312 aa overlap (77-351:284-592) 50 60 70 80 90 100 KIAA08 KWAQYEQDLQHRKRKHERKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKVSPD :. : :: : .. : ::..:. .. . KIAA06 PLMEAGSAGHVEVARLLLENGAGINTHSNEFKES-ALTLACYKGHLEMVRFLLEAGADQE 260 270 280 290 300 310 110 120 130 140 150 160 KIAA08 LCNEDGLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPLHAAATCGHINLVKILVQ ... ::: . :.:. :...:::. ::.:: . . .:: :: ::..:. .:.. KIAA06 HKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIE 320 330 340 350 360 370 170 180 190 200 KIAA08 YGADLLAVNSDGNMPY------------------------DLCEDEPTLDVIETCMAYQG ::.: ::..: : . : . : .. : .. KIAA06 RGASLEEVNDEGYTPLMEAAREGHEEMVALLLGQGANINAQTEETQETALTLACCGGFLE 380 390 400 410 420 430 210 220 230 240 250 KIAA08 ITQEKINE-----------MRVAPEQQMIADIHCMIAAGQDLDWIDAQGATLLHIAGANG ... :. . : .. . .. ..::: .. : : : : : :: KIAA06 VADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENG 440 450 460 470 480 490 260 270 280 290 300 310 KIAA08 YLRAAELLLDHGVRVDVKDWDGWEPLHAAAFWGQMQMAELLVSHGASLSARTSMDEMPI- . .:..::. :. .. .. : :: :: :.. ...:.:.::... :. .. . KIAA06 HTDVADVLLQAGADLEHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVL 500 510 520 530 540 550 320 330 340 350 360 KIAA08 DL-CEEEEFKVLLLELKHKHDVIMKSQLRHKSSLSRRTSSAGSRGKVVRRASLSDRTNLY .: : .. :. : : : : . :. :.. .....: KIAA06 SLACAGGHLAVVELLLAHGADPTHR--LKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLSA 560 570 580 590 600 610 370 380 390 400 410 420 KIAA08 RKEYEGEAILWQRSAAEDQRTSTYNGDIRETRTDQENKDPNPRLEKPVLLSEFPTKIPRG KIAA06 PPPDVTQLTPPSHDLNRAPRVPVQALPMVVPPQEPDKPPANVATTLPIRNKAASKQKSSS 620 630 640 650 660 670 >>KIAA1561 ( 1416 res) fh20178s1 (1416 aa) initn: 314 init1: 134 opt: 221 Z-score: 193.7 bits: 47.1 E(): 1.1e-05 Smith-Waterman score: 221; 24.150% identity (55.102% similar) in 294 aa overlap (133-415:26-312) 110 120 130 140 150 160 KIAA08 VSPDLCNEDGLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPLHAAATCGHINLV- .:.:. : :..: :: : .. : KIAA15 MKSLKSRLRRQDVPGPASSGAAAASAHAADWNKYDDRL----MKAAERGDVEKVT 10 20 30 40 50 170 180 190 200 210 KIAA08 KILVQYGADLLAVNSDGNMPYDLCEDEPTLDVIETCMAYQGI---TQEKI--NEMRVAPE .::.. :.. .. .: . . .. .:. ... . . :. :.. : ...: . KIAA15 SILAKKGVNPGKLDVEGRSVFHVVTSKGNLECLNAILIH-GVDITTSDTAGRNALHLAAK 60 70 80 90 100 110 220 230 240 250 260 270 KIAA08 QQMIADIHCMIAAGQDLDWIDAQGATLLHIAGANGYLRAAELLLDHGVRVDVKDWDGWEP .. .. . . : :: : :: :. . .:: :::. :..:: :: : KIAA15 YGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTP 120 130 140 150 160 170 280 290 300 310 320 330 KIAA08 LHAAAFWGQMQMAELLVSHGASLSARTSMDEMPIDL-CEEEEFKVLLLELKHKHDVIMKS : :. .. . .::...::....: .... . : :: .. . .:. :. . . KIAA15 LVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLD 180 190 200 210 220 230 340 350 360 370 380 390 KIAA08 QLRHKSSLSRRTSSAGSRGKVVRRASLSDRTNLYRKEYEGEAILWQRSAAEDQRTSTYNG : : :: : .. . ... :: . :: :. .. : ::. .. : . .. KIAA15 ALGHDSSYYARIGDNLDILTLLKTAS--ENTNKGRELWKKGPSLQQRNLTHMQDEVNVKS 240 250 260 270 280 400 410 420 430 440 450 KIAA08 DIRETRTDQ----ENKDPNPRLEKPVLLSEFPTKIPRGELDMPVENGLRAPVSAYQYALA :: .. : ::.: . ::.: KIAA15 HQREHQNIQDLEIENEDLKERLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLESEREKL 290 300 310 320 330 340 >>KIAA1223 ( 1089 res) pg00513 (1089 aa) initn: 566 init1: 207 opt: 215 Z-score: 190.0 bits: 46.0 E(): 1.8e-05 Smith-Waterman score: 334; 28.137% identity (59.696% similar) in 263 aa overlap (80-331:304-566) 50 60 70 80 90 100 KIAA08 QYEQDLQHRKRKHERKRSTGGRRKKVSFEASVALLEASLRNDAEEVRY-FLKNKVSPDLC : ..:.:. . :.. .:.. . . KIAA12 ALRSAAWGGHTEVVSALLYAGVKVDCADADSRTVLRAAAWGGHEDIVLNLLQHGAEVNKA 280 290 300 310 320 330 110 120 130 140 150 160 KIAA08 NEDGLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPLHAAATC-----GHINLVKI ...: ::: . .:::. ::.:::.:: .: . : : .:: : :: ..:.. KIAA12 DNEGRTALIAAAYMGHREIVEHLLDHGAEVNHEDVDGRTALSVAALCVPASKGHASVVSL 340 350 360 370 380 390 170 180 190 200 210 KIAA08 LVQYGADLLAVNSDGNMPYDLCEDEPTLDVIETCMAYQGITQEKINEMRV----APEQQM :.. ::.. ..:: : . : .::.. . . ... :. :. : . KIAA12 LIDRGAEVDHCDKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGH 400 410 420 430 440 450 220 230 240 250 260 270 KIAA08 IADIHCMIAAGQDLDWIDAQGATLLHIAGANGYLRAAELLLDHGVRVDVKDWDGWEPLHA . .. .. : .: ::..: :.: ::.:.: ..... :::.:. . .: :: ::: KIAA12 ASVVNTLLFWGAAVDSIDSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHM 460 470 480 490 500 510 280 290 300 310 320 330 KIAA08 AAFWGQMQMAELLVSHGASLSARTSMDEMPIDLCEEE-EFKVLLLELKHKHDVIMKSQLR ::: :. . : :. .:: . . ..:. : .: .. . . :..: .. KIAA12 AAFEGHRLICEALIEQGARTNEIDNDGRIPFILASQEGHYDCVQILLENKSNIDQRGYDG 520 530 540 550 560 570 340 350 360 370 380 390 KIAA08 HKSSLSRRTSSAGSRGKVVRRASLSDRTNLYRKEYEGEAILWQRSAAEDQRTSTYNGDIR KIAA12 RNALRVAALEGHRDIVELLFSHGADVNCKDADGRPTLYILALENQLTMAEYFLENGANVE 580 590 600 610 620 630 >>KIAA1876 ( 803 res) pf01162s1 (803 aa) initn: 330 init1: 152 opt: 188 Z-score: 168.6 bits: 41.6 E(): 0.00028 Smith-Waterman score: 234; 27.928% identity (54.054% similar) in 222 aa overlap (76-292:422-614) 50 60 70 80 90 100 KIAA08 KKWAQYEQDLQHRKRKHERKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKVSP : . . :.::. : : :.:..: . KIAA18 KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 400 410 420 430 440 450 110 120 130 140 150 160 KIAA08 DLCNEDGLTALHQCCIDNFEEIVKLLLSHGA-NVNAKDNELWTPLHAAATCGHINLVKIL : . .: : :: . :.:. :::.: .:: .:. :::. :. :..:::.: KIAA18 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 460 470 480 490 500 510 170 180 190 200 210 220 KIAA08 VQYGADLLAVNSDGNMPYDLCEDEPTLDVIETCMAYQGITQEKINEMRVAPEQQMIADIH .. :.:. ... : .: :..: .. ::.: KIAA18 LSKGSDINIRDNEEN----ICLHWA---------AFSGCVD--------------IAEI- 520 530 540 230 240 250 260 270 280 KIAA08 CMIAAGQDLDWIDAQGATLLHIAGANGYLRAAELLLDHGVRVDVKDWDGWEPLHAAAF-- ..:: :: .. .: . ::::. .. . :.:.. : .:. .: ::. :.. KIAA18 -LLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS 550 560 570 580 590 600 290 300 310 320 330 340 KIAA08 --WGQMQMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELKHKHDVIMKSQLRHK :. .::.. : KIAA18 QVWSALQMSKALQDSAPDRPSPVERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQ 610 620 630 640 650 660 >>KIAA1255 ( 1232 res) hh14633s1 (1232 aa) initn: 238 init1: 146 opt: 188 Z-score: 166.2 bits: 41.8 E(): 0.00038 Smith-Waterman score: 188; 27.136% identity (53.266% similar) in 199 aa overlap (111-301:832-1030) 90 100 110 120 130 140 KIAA08 VALLEASLRNDAEEVRYFLKNKVSPDLCNEDGLTALHQCCIDNFEEIVKLLLSHGANVNA :: : :: ..:: :. :: :::::: KIAA12 PTACFLIRSGCDVNSPRQPGANGEGEEEARDGQTPLHLAASWGLEETVQCLLEFGANVNA 810 820 830 840 850 860 150 160 170 180 190 KIAA08 KDNELWTPLHAAATCGHINLVKILVQYGADLLAV-NSDGNMPYDLCEDEPTLDVIETCMA .: : ::.:.: . : ....::.. : : . .: :. . :. . KIAA12 QDAEGRTPIHVAISSQHGVIIQLLVSHPDIHLNVRDRQGLTPFACAMTFKNNKSAEAILK 870 880 890 900 910 920 200 210 220 230 240 250 KIAA08 YQGITQEKI-----NEMRVAPEQQMIADIHCMIAAGQDLD--WIDAQGATLLHIAGANGY .. . :.. : ..:: ... : .. .:.. ... ::. : ::.: : KIAA12 RESGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVHANVNSRVQDASKLTPLHLAVQAGS 930 940 950 960 970 980 260 270 280 290 300 310 KIAA08 LRAAELLLDHGVRVDVKDWDGWEPLHAAAFWGQMQMAELLVSHGASLSARTSMDEMPIDL .. :: :..:. :: :: . .:. .:....: KIAA12 EIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHL 990 1000 1010 1020 1030 1040 320 330 340 350 360 370 KIAA08 CEEEEFKVLLLELKHKHDVIMKSQLRHKSSLSRRTSSAGSRGKVVRRASLSDRTNLYRKE KIAA12 AVMHGRLNNIRVLLTECTVDAEAFNLRGQSPLHILGQYGKENAAAIFDLFLECMPGYPLD 1050 1060 1070 1080 1090 1100 >>KIAA0946 ( 667 res) hj04787 (667 aa) initn: 253 init1: 88 opt: 181 Z-score: 163.7 bits: 40.4 E(): 0.00053 Smith-Waterman score: 221; 25.100% identity (54.582% similar) in 251 aa overlap (70-317:83-304) 40 50 60 70 80 90 KIAA08 RRAQQLKKWAQYEQDLQHRKRKHERKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFL ::. ... .. ...:. . :. : .. KIAA09 YDTEAGCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELV 60 70 80 90 100 110 100 110 120 130 140 150 KIAA08 KNKVSPDLCNEDGLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELW-TPLHAAATCGHI . . .....: :: :.: ..:: .:.:: :. ..: :::: :. ::. KIAA09 EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHL 120 130 140 150 160 170 160 170 180 190 200 210 KIAA08 NLVKILVQYGADLLAVNSDGNMPYDLCEDEPTLDVIETCMAYQGITQEKINEMRVAPEQQ ..: :..:::: ....: : .:. ..: . KIAA09 SMVVQLMKYGADPSLIDGEG------C----------SCI-------------HLAAQFG 180 190 200 220 230 240 250 260 270 KIAA08 MIADIHCMIAAGQDLDWIDAQGAT-LLHIAGANGYLRAAELLLDHGVRVDVKD-WDGWEP . . .:: :::.: .: .: : :. : . . ..::: .: :.. : . KIAA09 HTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTA 210 220 230 240 250 260 280 290 300 310 320 330 KIAA08 LHAAAFWGQMQMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELKHKHDVIMKSQ :: :.. :. . ::. ::...:.. : .:: .... KIAA09 LHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 270 280 290 300 310 320 340 350 360 370 380 390 KIAA08 LRHKSSLSRRTSSAGSRGKVVRRASLSDRTNLYRKEYEGEAILWQRSAAEDQRTSTYNGD KIAA09 PSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLNIDSWLIKGLMYGGVWATVQFLSKS 330 340 350 360 370 380 578 residues in 1 query sequences 1986927 residues in 2037 library sequences Scomplib [34.26] start: Thu Dec 18 15:17:39 2008 done: Thu Dec 18 15:17:39 2008 Total Scan time: 0.490 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]