hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-13532198/chunk_1/iprscan-20080502-13532198.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0816 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00135 977.4 2.1e-289 20 SM00192 465.9 2e-135 8 SM00181 105.4 6.6e-27 7 SM00179 55.9 5.3e-12 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00192 1/8 74 116 .. 1 47 [] 44.2 1.7e-08 SM00192 2/8 118 155 .. 1 47 [] 62.5 5.2e-14 SM00192 3/8 157 193 .. 1 47 [] 50.3 2.5e-10 SM00192 4/8 195 232 .. 1 47 [] 63.4 2.9e-14 SM00192 5/8 238 275 .. 1 47 [] 55.1 9.3e-12 SM00192 6/8 278 315 .. 1 47 [] 60.2 2.7e-13 SM00192 7/8 317 354 .. 1 47 [] 68.5 8.6e-16 SM00181 1/7 317 353 .. 1 32 [] 4.0 1.1e+02 SM00192 8/8 359 399 .. 1 47 [] 61.7 9.3e-14 SM00181 2/7 405 442 .. 1 32 [] 16.9 2.8 SM00179 1/3 443 482 .. 1 34 [] 42.5 5.7e-08 SM00181 3/7 446 482 .. 1 32 [] 21.3 0.13 SM00135 1/20 508 550 .. 1 51 [] 48.4 9.4e-10 SM00135 2/20 551 593 .. 1 51 [] 69.0 6e-16 SM00135 3/20 594 637 .. 1 51 [] 58.7 7.3e-13 SM00135 4/20 638 680 .. 1 51 [] 68.8 7e-16 SM00135 5/20 681 722 .. 1 51 [] 39.6 4.2e-07 SM00179 2/3 746 785 .. 1 34 [] 0.3 1.5 SM00181 4/7 749 785 .. 1 32 [] 18.2 1.2 SM00135 6/20 813 855 .. 1 51 [] 41.7 9.6e-08 SM00135 7/20 856 898 .. 1 51 [] 70.2 2.5e-16 SM00135 8/20 899 942 .. 1 51 [] 50.3 2.5e-10 SM00135 9/20 943 985 .. 1 51 [] 68.4 9.1e-16 SM00135 10/20 986 1027 .. 1 51 [] 34.2 1.8e-05 SM00181 5/7 1053 1092 .. 1 32 [] 22.1 0.076 SM00135 11/20 1121 1163 .. 1 51 [] 40.6 2.1e-07 SM00135 12/20 1164 1206 .. 1 51 [] 57.2 2.1e-12 SM00135 13/20 1207 1250 .. 1 51 [] 45.0 1e-08 SM00135 14/20 1251 1293 .. 1 51 [] 48.0 1.3e-09 SM00135 15/20 1294 1333 .. 1 51 [] 17.1 1.5 SM00179 3/3 1357 1397 .. 1 34 [] 13.1 0.04 SM00181 6/7 1360 1397 .. 1 32 [] 20.5 0.23 SM00135 16/20 1425 1467 .. 1 51 [] 36.8 3e-06 SM00135 17/20 1468 1510 .. 1 51 [] 57.6 1.6e-12 SM00135 18/20 1511 1551 .. 1 51 [] 41.2 1.4e-07 SM00135 19/20 1552 1594 .. 1 51 [] 65.6 6.4e-15 SM00135 20/20 1595 1635 .. 1 51 [] 19.2 0.57 SM00181 7/7 1661 1694 .. 1 32 [] 2.3 1.6e+02 Alignments of top-scoring domains: SM00192: domain 1 of 8, from 74 to 116: score 44.2, E = 1.7e-08 *->tCspgepneFqCg...ngr..CIplswvCDGddDCgDGSDEdpaidp C+ + +F+C+ + g+ +CIp w+CDGd+DCgD+SDE KIAA0816 74 ACGRS---HFTCAvsaLGEctCIPAQWQCDGDNDCGDHSDE------ 111 enCps<-* ++C KIAA0816 112 DGCIL 116 SM00192: domain 2 of 8, from 118 to 155: score 62.5, E = 5.2e-14 *->tCspgepneFqCgngrCIplswvCDGddDCgDGSDEdpaidpenCps tCsp F+C+ng+CI +swvCDGd+DC+D SDE ++Cp+ KIAA0816 118 TCSPL---DFHCDNGKCIRRSWVCDGDNDCEDDSDE------QDCPP 155 <-* KIAA0816 - - SM00192: domain 3 of 8, from 157 to 193: score 50.3, E = 2.5e-10 *->tCspgepneFqCgngrCIplswvCDGddDCgDGSDEdpaidpenCps +C ++ eF C+ng CI + w+CDGd+DCgD+SDE C KIAA0816 157 ECEED---EFPCQNGYCIRSLWHCDGDNDCGDNSDE-------QCDM 193 <-* KIAA0816 - - SM00192: domain 4 of 8, from 195 to 232: score 63.4, E = 2.9e-14 *->tCspgepneFqCgngrCIplswvCDGddDCgDGSDEdpaidpenCps +Cs eF+C++g CI ++w CDGd DC DGSDE enCps KIAA0816 195 KCSDK---EFRCSDGSCIAEHWYCDGDTDCKDGSDE------ENCPS 232 <-* KIAA0816 - - SM00192: domain 5 of 8, from 238 to 275: score 55.1, E = 9.3e-12 *->tCspgepneFqCgngrCIplswvCDGddDCgDGSDEdpaidpenCps +C+ eFqC+ grCI ++CDGddDCgD+SDE +C+s KIAA0816 238 PCNLE---EFQCAYGRCILDIYHCDGDDDCGDWSDE------SDCSS 275 <-* KIAA0816 - - SM00192: domain 6 of 8, from 278 to 315: score 60.2, E = 2.7e-13 *->tCspgepneFqCgngrCIplswvCDGddDCgDGSDEdpaidpenCps +C++g eF+C++g CI+ w+CDGd DC D SDE +nC++ KIAA0816 278 PCRSG---EFMCDSGLCINAGWRCDGDADCDDQSDE------RNCTT 315 <-* KIAA0816 - - SM00192: domain 7 of 8, from 317 to 354: score 68.5, E = 8.6e-16 *->tCspgepneFqCgngrCIplswvCDGddDCgDGSDEdpaidpenCps C++ +F+C++grC+ lsw+CDG+dDC+D+SDE enC++ KIAA0816 317 MCTAE---QFRCHSGRCVRLSWRCDGEDDCADNSDE------ENCEN 354 <-* KIAA0816 - - SM00181: domain 1 of 7, from 317 to 353: score 4.0, E = 1.1e+02 *->eCa....pCsnGgtEqnGtCi..sytC.....CpgpGytg.rCe<-* C ++ C+ G +C++ s++C+++++C+ + ++Ce KIAA0816 317 MCTaeqfRCHSG------RCVrlSWRCdgeddCA-DNSDEeNCE 353 SM00192: domain 8 of 8, from 359 to 399: score 61.7, E = 9.3e-14 *->tCspgepneFqCgngrCIplswvCDGddDCgDGSDEdpaidpenCps +C+ + +F C ngrCI ++++C+G++DCgD+SDE+p ++nC + KIAA0816 359 QCALD---QFLCWNGRCIGQRKLCNGVNDCGDNSDESP---QQNCRP 399 <-* KIAA0816 - - SM00181: domain 2 of 7, from 405 to 442: score 16.9, E = 2.8 *->eCa....pCsnGgtEqnGtCi....sytC.CpgpGytg.....rCe< C ++++C + +C+ ++ +C+C+ Gy++++++++C+ KIAA0816 405 NCNvnngGCAQ-------KCQmvrgAVQCtCH-TGYRLtedghTCQ 442 -* KIAA0816 - - SM00179: domain 1 of 3, from 443 to 482: score 42.5, E = 5.7e-08 *->DiDEC....pCqnGGptgtCiN.vGSYrC.CppGyt.....rnCe<- D++EC +++ C++ C+N++G ++C C Gy+ ++++r+C+ KIAA0816 443 DVNECaeegYCSQ-----GCTNsEGAFQCwCETGYElrpdrRSCK 482 * KIAA0816 - - SM00181: domain 3 of 7, from 446 to 482: score 21.3, E = 0.13 *->eCa...pCsnGgtEqnGtCi....sytC.CpgpGytg.....rCe<- eCa+++ Cs+G C+++++ ++C C Gy++++++++C+ KIAA0816 446 ECAeegYCSQG-------CTnsegAFQCwCE-TGYELrpdrrSCK 482 * KIAA0816 - - SM00135: domain 1 of 20, from 508 to 550: score 48.4, E = 9.4e-10 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl ++l+ ++l++ +A+D+++++++++W+D++ld +I ranl KIAA0816 508 YTLLLNNLeNA---IALDFHHRRELVFWSDVTLD------RILRANL 545 dGtnr<-* +G+n+ KIAA0816 546 NGSNV 550 SM00135: domain 2 of 20, from 551 to 593: score 69.0, E = 6e-16 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl + +vs+gl++P g lAvDw+++ +lYWtD+g+ +Ie+anl KIAA0816 551 EEVVSTGLeSPGG-LAVDWVHD--KLYWTDSGTS------RIEVANL 588 dGtnr<-* dG +r KIAA0816 589 DGAHR 593 SM00135: domain 3 of 20, from 594 to 637: score 58.7, E = 7.3e-13 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +vl+ ++l+ Pr+ +A++++eg +YWtDwg+ ++Ie++++ KIAA0816 594 KVLLWQNLeKPRA-IALHPMEG--TIYWTDWGNT-----PRIEASSM 632 dGtnr<-* dG++r KIAA0816 633 DGSGR 637 SM00135: domain 4 of 20, from 638 to 680: score 68.8, E = 7e-16 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl r++ +++l wP+g l++D+ ++ r+YW+D++++ +Ieranl KIAA0816 638 RIIADTHLfWPNG-LTIDYAGR--RMYWVDAKHH------VIERANL 675 dGtnr<-* dG++r KIAA0816 676 DGSHR 680 SM00135: domain 5 of 20, from 681 to 722: score 39.6, E = 4.2e-07 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl + ++s+gl++P +A+ ++e+ lYWtDw+++ ++ +++++ KIAA0816 681 KAVISQGLpHP---FAITVFED--SLYWTDWHTK-----SINSANKF 717 dGtnr<-* +G+n+ KIAA0816 718 TGKNQ 722 SM00179: domain 2 of 3, from 746 to 785: score 0.3, E = 1.5 *->DiDEC.....pCqnGGptgtCiN.vGSYrC.CppGyt....rnCe<- + C+++++ C + C + Y+C Cp G+++ +++ C KIAA0816 746 GKNRCgdnngGCTH-----LCLPsGQNYTCaCPTGFRkissHACA 785 * KIAA0816 - - SM00181: domain 4 of 7, from 749 to 785: score 18.2, E = 1.2 *->eCa....pCsnGgtEqnGtCi....sytC.CpgpGytg....rCe<- C +++++C + C++++ ytC Cp G++ +++ C KIAA0816 749 RCGdnngGCTH-------LCLpsgqNYTCaCP-TGFRKisshACA 785 * KIAA0816 - - SM00135: domain 6 of 20, from 813 to 855: score 41.7, E = 9.6e-08 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl v+ ++++ +A+Dw +++d +YWtD+++d +I+ra++ KIAA0816 813 DVIPLADVrSA---VALDWDSRDDHVYWTDVSTD------TISRAKW 850 dGtnr<-* dGt++ KIAA0816 851 DGTGQ 855 SM00135: domain 7 of 20, from 856 to 898: score 70.2, E = 2.5e-16 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +v+v+++l++P+g lA+Dw+++ +lYWtD+g+d +Ie+an KIAA0816 856 EVVVDTSLeSPAG-LAIDWVTN--KLYWTDAGTD------RIEVANT 893 dGtnr<-* dG++r KIAA0816 894 DGSMR 898 SM00135: domain 8 of 20, from 899 to 942: score 50.3, E = 2.5e-10 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +vl+ ++l+ Pr ++v +++g ++YWtDwg +kIera + KIAA0816 899 TVLIWENLdRPRD-IVVEPMGG--YMYWTDWGAS-----PKIERAGM 937 dGtnr<-* d ++r KIAA0816 938 DASGR 942 SM00135: domain 9 of 20, from 943 to 985: score 68.4, E = 9.1e-16 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +v++ss+l+wP+g lA+D+ ++ rlYW+D+g++ +Ie a l KIAA0816 943 QVIISSNLtWPNG-LAIDYGSQ--RLYWADAGMK------TIEFAGL 980 dGtnr<-* dG+ r KIAA0816 981 DGSKR 985 SM00135: domain 10 of 20, from 986 to 1027: score 34.2, E = 1.8e-05 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +vl+ s+l++P + + +++ r+YWtDw ++ ++ ++ +l KIAA0816 986 KVLIGSQLpHP---FGLTLYGE--RIYWTDWQTK-----SIQSADRL 1022 dGtnr<-* +G +r KIAA0816 1023 TGLDR 1027 SM00181: domain 5 of 7, from 1053 to 1092: score 22.1, E = 0.076 *->eCa....pCsnGgtEqnGtCi......sytC.CpgpGytg.....rC +Ca ++++Cs+ C++++++++++C+Cp G + +++++C KIAA0816 1053 PCAmengGCSH-------LCLrspnpsGFSCtCP-TGINLlsdgkTC 1091 e<-* KIAA0816 1092 S 1092 SM00135: domain 11 of 20, from 1121 to 1163: score 40.6, E = 2.1e-07 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl v ++ +++ + + vD+ eg ++YW+D++l+ +I+ranl KIAA0816 1121 VVPINITMkNTIA-VGVDPQEG--KVYWSDSTLH------RISRANL 1158 dGtnr<-* dG+ + KIAA0816 1159 DGSQH 1163 SM00135: domain 12 of 20, from 1164 to 1206: score 57.2, E = 2.1e-12 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl + ++++gl++ +g lAvD i++ ++YWtD g++ +Ie+ nl KIAA0816 1164 EDIITTGLqTTDG-LAVDAIGR--KVYWTDTGTN------RIEVGNL 1201 dGtnr<-* dG++r KIAA0816 1202 DGSMR 1206 SM00135: domain 13 of 20, from 1207 to 1250: score 45.0, E = 1e-08 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +vlv ++l++Pr+ +++ + g ++YWtDwg++ ak er+ + KIAA0816 1207 KVLVWQNLdSPRA-IVLYHEMG--FMYWTDWGEN-----AKLERSGM 1245 dGtnr<-* dG++r KIAA0816 1246 DGSDR 1250 SM00135: domain 14 of 20, from 1251 to 1293: score 48.0, E = 1.3e-09 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl vl++++l+wP+g l+vD + l W+D++++ +Ie+a+l KIAA0816 1251 AVLINNNLgWPNG-LTVDKASS--QLLWADAHTE------RIEAADL 1288 dGtnr<-* +G nr KIAA0816 1289 NGANR 1293 SM00135: domain 15 of 20, from 1294 to 1333: score 17.1, E = 1.5 *->rvlvssglwPrgalAvDwiegedrlYWtDwgldgsddkakIeranld ++lvs +P g l++ ++ ++YWtDw ++ +I ra+ KIAA0816 1294 HTLVSPVQHPYG-LTL--LDS--YIYWTDWQTR------SIHRADKG 1329 Gtnr<-* + KIAA0816 1330 TGSN 1333 SM00179: domain 3 of 3, from 1357 to 1397: score 13.1, E = 0.04 *->DiDEC.....pCqnGGptgtCiN.vGSYrC.CppGyt.....rnCe< + C+++++ C++ C ++ +++C Cp G + ++++++C+ KIAA0816 1357 GFNKCgsrngGCSH-----LCLPrPSGFSCaCPTGIQlkgdgKTCD 1397 -* KIAA0816 - - SM00181: domain 6 of 7, from 1360 to 1397: score 20.5, E = 0.23 *->eCa....pCsnGgtEqnGtCi....sytC.CpgpGytg.....rCe< C +++++Cs+ C++++++++C Cp G ++++++++C KIAA0816 1360 KCGsrngGCSH-------LCLprpsGFSCaCP-TGIQLkgdgkTCD 1397 -* KIAA0816 - - SM00135: domain 16 of 20, from 1425 to 1467: score 36.8, E = 3e-06 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl + l+++ + l++D ++g ++Y+tD+ ld +I+ra+l KIAA0816 1425 VHVPVPELnNVIS-LDYDSVDG--KVYYTDVFLD------VIRRADL 1462 dGtnr<-* +G+n KIAA0816 1463 NGSNM 1467 SM00135: domain 17 of 20, from 1468 to 1510: score 57.6, E = 1.6e-12 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl ++++ gl++ +g lAvDw+++ +lYWtD g++ +Ie+++l KIAA0816 1468 ETVIGRGLkTTDG-LAVDWVAR--NLYWTDTGRN------TIEASRL 1505 dGtnr<-* dG+ r KIAA0816 1506 DGSCR 1510 SM00135: domain 18 of 20, from 1511 to 1551: score 41.2, E = 1.4e-07 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +vl++++l+ +A + +g +l+WtDwg+ akIeranl KIAA0816 1511 KVLINNSLdD----IAAFPRKG--YLFWTDWGHI-----AKIERANL 1546 dGtnr<-* dG++r KIAA0816 1547 DGSER 1551 SM00135: domain 19 of 20, from 1552 to 1594: score 65.6, E = 6.4e-15 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +vl++++l+wP+g l++D+ ++ r+YW+D++ld +Ie+a+l KIAA0816 1552 KVLINTDLgWPNG-LTLDYDTR--RIYWVDAHLD------RIESADL 1589 dGtnr<-* +G+ r KIAA0816 1590 NGKLR 1594 SM00135: domain 20 of 20, from 1595 to 1635: score 19.2, E = 0.57 *->rvlvssgl.wPrgalAvDwiegedrlYWtDwgldgsddkakIeranl +++ ++++P +A+ ++ ++YWtDw ++ ++ ++ ++ KIAA0816 1595 -QVLVGHVsHP---FALTQQDR--WIYWTDWQTK-----SIQRVDKY 1630 dGtnr<-* G n KIAA0816 1631 SGRNK 1635 SM00181: domain 7 of 7, from 1661 to 1694: score 2.3, E = 1.6e+02 *->eCa....pCsnGgtEqnGtCi....sytC.CpgpGytg.rCe<-* C ++++C + C + + + C Cp + + C KIAA0816 1661 ACGvnngGCTH-------LCFarasDFVCaCP-DEPDSqPCS 1694 //