hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12592462/chunk_1/iprscan-20080502-12592462.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0785
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00614                                                  58.8    6.8e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00614    1/1      32    86 ..     1    57 []    58.8  6.8e-13

Alignments of top-scoring domains:
SM00614: domain 1 of 1, from 32 to 86: score 58.8, E = 6.8e-13
                   *->kkrSkvWkhFtk.......iekkdngkrvetrAkCkyCgkklsyssk
                      + +SkvWk+F ++++ ++ i+++        + +C++C+++++ys  
    KIAA0785    32    RAKSKVWKYFGFdtnaegcILQWK-------KIYCRICMAQIAYS-- 69   

                   gGTsnLrrHLrrkHpar<-*
                   g+TsnL  HL++ Hp++   
    KIAA0785    70 GNTSNLSYHLEKNHPEE    86   

//