hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12592462/chunk_1/iprscan-20080502-12592462.nocrc
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Query sequence: KIAA0785
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05699.5.fs hAT family dimerisation domain                  76.2    2.2e-21   1
PF02892.5.fs BED zinc finger                                 73.8    4.1e-21   1
PF05699.5.ls hAT family dimerisation domain                  78.1    2.6e-20   1
PF02892.5.ls BED zinc finger                                 75.8    1.3e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02892.5.fs   1/1      35    84 ..     1    52 []    73.8  4.1e-21
PF02892.5.ls   1/1      35    84 ..     1    52 []    75.8  1.3e-19
PF05699.5.fs   1/1     583   663 ..     1    94 []    76.2  2.2e-21
PF05699.5.ls   1/1     583   663 ..     1    94 []    78.1  2.6e-20

Alignments of top-scoring domains:
PF02892.5.fs: domain 1 of 1, from 35 to 84: score 73.8, E = 4.1e-21
                   *->SkvWkhFtkveeeedgkeveg.kakCkhCgkklsrkkksGTsnLirH
                      SkvWk+F +  ++++g++++++k++C++C+++++++  ++TsnL  H
    KIAA0785    35    SKVWKYFGFD-TNAEGCILQWkKIYCRICMAQIAYS--GNTSNLSYH 78   

                   LrrkHp<-*
                   L+++Hp   
    KIAA0785    79 LEKNHP    84   

PF02892.5.ls: domain 1 of 1, from 35 to 84: score 75.8, E = 1.3e-19
                   *->SkvWkhFtkveeeedgkeveg.kakCkhCgkklsrkkksGTsnLirH
                      SkvWk+F +  ++++g++++++k++C++C+++++++  ++TsnL  H
    KIAA0785    35    SKVWKYFGFD-TNAEGCILQWkKIYCRICMAQIAYS--GNTSNLSYH 78   

                   LrrkHp<-*
                   L+++Hp   
    KIAA0785    79 LEKNHP    84   

PF05699.5.fs: domain 1 of 1, from 583 to 663: score 76.2, E = 2.2e-21
                   *->ELdkYlselpvlprnteprgledfdvLeWWkeaqnssryPiLsklAr
                      EL  ++s+ +vl  n+        d+L+WW+  ++ + +P+L k+++
    KIAA0785   583    ELSNFKSQ-KVLGLNE--------DPLKWWS--DRLALFPLLPKVLQ 618  

                   diLsiPvssaasErsFStgklgrvldesrnrlepenveaLlcledwl<-*
                   +++++ ++++a+Er F  +   +v++ +rnrl p +v+  ++l  +    
    KIAA0785   619 KYWCVTATRVAPERLFGSA--ANVVSAKRNRLAPAHVDEQVFLYENA    663  

PF05699.5.ls: domain 1 of 1, from 583 to 663: score 78.1, E = 2.6e-20
                   *->ELdkYlselpvlprnteprgledfdvLeWWkeaqnssryPiLsklAr
                      EL  ++s+ +vl  n+        d+L+WW+  ++ + +P+L k+++
    KIAA0785   583    ELSNFKSQ-KVLGLNE--------DPLKWWS--DRLALFPLLPKVLQ 618  

                   diLsiPvssaasErsFStgklgrvldesrnrlepenveaLlcledwl<-*
                   +++++ ++++a+Er F  +   +v++ +rnrl p +v+  ++l  +    
    KIAA0785   619 KYWCVTATRVAPERLFGSA--ANVVSAKRNRLAPAHVDEQVFLYENA    663  

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