hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080909/iprscan-20080909-09403272/chunk_1/iprscan-20080909-09403272.nocrc
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Query sequence: KIAA0734
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                      156.9    4.3e-46   2
PF00168.20.ls C2 domain                                      160.8    3.2e-45   2
PF06292.8.fs Domain of Unknown Function (DUF1041)            92.5      1e-25   1
PF06292.8.ls Domain of Unknown Function (DUF1041)            94.2    3.7e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.fs   1/2     200   309 ..     1    88 []    70.6    2e-20
PF00168.20.ls   1/2     200   309 ..     1    88 []    72.5  1.2e-18
PF06292.8.fs   1/1     564   645 ..     1   121 []    92.5    1e-25
PF06292.8.ls   1/1     564   645 ..     1   121 []    94.2  3.7e-25
PF00168.20.fs   2/2    1030  1122 ..     1    88 []    86.3  4.1e-25
PF00168.20.ls   2/2    1030  1122 ..     1    88 []    88.3  2.2e-23

Alignments of top-scoring domains:
PF00168.20.fs: domain 1 of 2, from 200 to 309: score 70.6, E = 2e-20
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qk.........
                      L+V v++AknL +kD +ng sDPY+ + +++  +d +++++ +++++
    KIAA0734   200    LKVSVMRAKNLLAKD-PNGFSDPYCMLGILP-ASDaTRepraqkeqr 244  

                   ..................kkTkvikktlNPvWNEtFtFevpppdlqetLe
                    + +++++++++ + +  + T+v+ +tlNPvW E+F Fe+ + + ++ L+
    KIAA0734   245 fgfrkgskrggplpakciQVTEVKSSTLNPVWKEHFLFEIEDVSTDQ-LH 293  

                   ieVyDydrfgrddflGevs<-*
                   + ++D+d +     l e++   
    KIAA0734   294 LDIWDHDDDV---SLVEAC    309  

PF00168.20.ls: domain 1 of 2, from 200 to 309: score 72.5, E = 1.2e-18
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qk.........
                      L+V v++AknL +kD +ng sDPY+ + +++  +d +++++ +++++
    KIAA0734   200    LKVSVMRAKNLLAKD-PNGFSDPYCMLGILP-ASDaTRepraqkeqr 244  

                   ..................kkTkvikktlNPvWNEtFtFevpppdlqetLe
                    + +++++++++ + +  + T+v+ +tlNPvW E+F Fe+ + + ++ L+
    KIAA0734   245 fgfrkgskrggplpakciQVTEVKSSTLNPVWKEHFLFEIEDVSTDQ-LH 293  

                   ieVyDydrfgrddflGevs<-*
                   + ++D+d +     l e++   
    KIAA0734   294 LDIWDHDDDV---SLVEAC    309  

PF06292.8.fs: domain 1 of 1, from 564 to 645: score 92.5, E = 1e-25
                   *->ktvvkdclkaaarvwydfifenckieermfqvdqpgaqrvPRvpCIL
                      +++++++lk+++r+wyd+i++++  ++r    +qpg+qr+P      
    KIAA0734   564    NMDIAAALKRGNREWYDRILNDK--SPR----EQPGPQRLP------ 598  

                   MNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqeln
                        +l+v+++++++d+      ++++sv+++l+++   +Ln       
    KIAA0734   599 -----GLVVLADAVYDDL------QFCYSVYASLFHS---ILN------- 627  

                   lgkesAedlwslfavdldsaleEq<-*
                         +d+++l++++l+++++E+   
    KIAA0734   628 ------VDVFTLTFRQLERLVAEE    645  

PF06292.8.ls: domain 1 of 1, from 564 to 645: score 94.2, E = 3.7e-25
                   *->ktvvkdclkaaarvwydfifenckieermfqvdqpgaqrvPRvpCIL
                      +++++++lk+++r+wyd+i++++  ++r    +qpg+qr+P      
    KIAA0734   564    NMDIAAALKRGNREWYDRILNDK--SPR----EQPGPQRLP------ 598  

                   MNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqeln
                        +l+v+++++++d+      ++++sv+++l+++   +Ln       
    KIAA0734   599 -----GLVVLADAVYDDL------QFCYSVYASLFHS---ILN------- 627  

                   lgkesAedlwslfavdldsaleEq<-*
                         +d+++l++++l+++++E+   
    KIAA0734   628 ------VDVFTLTFRQLERLVAEE    645  

PF00168.20.fs: domain 2 of 2, from 1030 to 1122: score 86.3, E = 4.1e-25
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qk..kkTkvik
                      L V v+ A +L p D +ng+sDP+V v+lg+ +  + +++++T v+ 
    KIAA0734  1030    LAVEVLHAADLLPLD-ANGLSDPFVIVELGPPHLFpLVrsQRTQVKT 1075 

                   ktlNPvWNEtFtFevpppdlqe...tLeieVyDydrfgrddflGevs<-*
                   +tl+Pv++E F+F+vp + + ++  ++ ++V+D+d ++ +df Ge+    
    KIAA0734  1076 RTLHPVYDELFYFSVPAEACRRraaCVLFTVMDHDWLSTNDFAGEAA    1122 

PF00168.20.ls: domain 2 of 2, from 1030 to 1122: score 88.3, E = 2.2e-23
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qk..kkTkvik
                      L V v+ A +L p D +ng+sDP+V v+lg+ +  + +++++T v+ 
    KIAA0734  1030    LAVEVLHAADLLPLD-ANGLSDPFVIVELGPPHLFpLVrsQRTQVKT 1075 

                   ktlNPvWNEtFtFevpppdlqe...tLeieVyDydrfgrddflGevs<-*
                   +tl+Pv++E F+F+vp + + ++  ++ ++V+D+d ++ +df Ge+    
    KIAA0734  1076 RTLHPVYDELFYFSVPAEACRRraaCVLFTVMDHDWLSTNDFAGEAA    1122 

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