hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-11202905/chunk_1/iprscan-20080502-11202905.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0727 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00063.11.ls Myosin head (motor domain) 1022.3 1.5e-304 1 PF00063.11.fs Myosin head (motor domain) 1020.7 4.7e-304 1 PF06017.4.ls Myosin tail 266.5 5e-77 1 PF06017.4.fs Myosin tail 264.6 1.8e-76 1 PF00612.17.fs IQ calmodulin-binding motif 32.3 1.4e-08 2 PF00612.17.ls IQ calmodulin-binding motif 36.3 9.7e-08 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00063.11.ls 1/1 15 686 .. 1 791 [] 1022.3 1.5e-304 PF00063.11.fs 1/1 17 686 .. 1 791 [] 1020.7 4.7e-304 PF00612.17.fs 1/2 703 723 .. 1 21 [] 22.1 1.7e-05 PF00612.17.ls 1/2 703 723 .. 1 21 [] 24.1 0.00047 PF00612.17.ls 2/2 725 745 .. 1 21 [] 12.2 1.7 PF06017.4.ls 1/1 806 1009 .. 1 242 [] 266.5 5e-77 PF06017.4.fs 1/1 806 1009 .. 1 242 [] 264.6 1.8e-76 Alignments of top-scoring domains: PF00063.11.ls: domain 1 of 1, from 15 to 686: score 1022.3, E = 1.5e-304 *->veDlveLtylnEpsvLhNLkkRYtsgdlIYTYsGlvLvsvNPYkrLp D+v++ ++ p + +NL+ R+ ++ IYT++G v vsvNPYk L+ KIAA0727 15 KADFVLMDTVSMPEFMANLRLRFE-KGRIYTFIGEVVVSVNPYKLLN 60 iYteeiikaYrGkrrgElpPHiFAiAdeAYRsMlsdkeNQsIlisGESGA iY+ ++i+ Y+G+ +E pPH+FAiAd+AY++M+++ ++ +I+isGESGA KIAA0727 61 IYGRDTIEQYKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGA 110 GKTEntKkvmqYlAsvsgstpkvesaevtpnkeegsledqilqsNPiLEA GKTE++K++mqY+A+++ ++ +e+++++ +l sN +LEA KIAA0727 111 GKTEASKYIMQYIAAITNPSQ---------RAEVERVKNMLLKSNCVLEA 151 FGNAKTtRNNNSSRFGKfieIqFdatGsiNvTlvGgkIetYLLEKSRVvy FGNAKT RN+NSSRFGK++ I+Fd +G++ +Gg+I++YLLEKSRV+ KIAA0727 152 FGNAKTNRNDNSSRFGKYMDINFDFKGDP----IGGHINNYLLEKSRVIV 197 QtegERNFHIFYQLLagasaqeekkeLkLtspadpkdYaYLnqsgTynPc Q++gER+FH FYQLL g s+q+ + L+L+ + ++Y+Y ++ + KIAA0727 198 QQPGERSFHSFYQLLQGGSEQM-LRSLHLQ-K-SLSSYNYIHVGA----Q 240 ytvDdgiDDaeeFkdtrkAlkiiGftdeeqrsifrilAAILhLGNieGFk ++ i+Da+eF+ + +A+k+iGf+ ee++++++ilAAILhLGN++ F+ KIAA0727 241 LKS--SINDAAEFRVVADAMKVIGFKPEEIQTVYKILAAILHLGNLK-FV 287 qdqatTGneeqAGvtvsedteeileiiaeLLGvDaeeLekaLlsrriktG +d+ ++ ++e+ ++ ++iiaeLL + ekaLl+r++ tG KIAA0727 288 VDG----DTP-----LIENGKV-VSIIAELLSTKTDMVEKALLYRTVATG 327 gggkRretvtkpqnveqAryaRDALAKaiYsRLFdWiVekiNkaLsakeQ r+ + k + ++A+y RDA+AKaiY+RLF WiV++iN +++k KIAA0727 328 -----RDIIDKQHTEQEASYGRDAFAKAIYERLFCWIVTRINDIIEVKNY 372 as.dSrGGqaaegdDTVSITVVdlPraaldktasfIGvLDIyGFEIFaek +++ + ++ +IGvLDIyGFEIF ++ KIAA0727 373 DTtI-------------------------HGKNTVIGVLDIYGFEIF-DN 396 NSFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIeWtfIdyglDnqac NSFEQ+cINY+NEKLQQ+F+++++k EQEEY+rEgI+W++Idy ++nq++ KIAA0727 397 NSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDY-FNNQII 445 idLIEkKkPpGIlslLDEeCr.fPkatDqtFldKLlqtfsskhprlthFA +dL+E + GI+++LD++C+++ k tD+ Fl+ L++ +kh+ hF KIAA0727 446 VDLVEQ-QHKGIIAILDDACMnVGKVTDEMFLEALNSKL-GKHA---HFS 490 qkpgrfkkgksrqgkteFiikHYAGdVeYnaegfleKNkDpLfddlisll +++ k ++ F+i+HYAGdV Y++ gf++KNkD+Lf+d l+ KIAA0727 491 SRK-LCASDKILEFDRDFRIRHYAGDVVYSVIGFIDKNKDTLFQDFKRLM 539 ksSsdepllaeLFpeeelseAaNltlkapdfeadfdeeeaaaksaklgsg Ss+ p l + +pe l KIAA0727 540 YNSSN-PVLKNMWPEGKL-------------------------------- 556 kgksgkkknfleTvgsqfkeslgeLmktLsstAnlnPHfvRCIKPNekKk + ++k++ T++ +fk+s+++L+ +L s +P++vRCIKPN+kK KIAA0727 557 -SITEVTKRP-LTAATLFKNSMIALVDNLASK---EPYYVRCIKPNDKKS 601 agqFDaslVlhQlrclGvLEigiRirraGFPnRitfdeFlqRYrlLapkt + FD+++++hQ+ +lG+LE ++R+rraGF++R+t+ +Fl+RY++ ++ t KIAA0727 602 PQIFDDERCRHQVEYLGLLE-NVRVRRAGFAFRQTYEKFLHRYKMISEFT 650 wpsgfrpewvgdakkgceliLqslrqtpgnlDkeeyrfGkTKiFfR<-* wp + +++k+++++++++ + +++++GkTKiF+R KIAA0727 651 WPNHD----LPSDKEAVKKLIERC-----GF-QDDVAYGKTKIFIR 686 PF00063.11.fs: domain 1 of 1, from 17 to 686: score 1020.7, E = 4.7e-304 *->veDlveLtylnEpsvLhNLkkRYtsgdlIYTYsGlvLvsvNPYkrLp D+v++ ++ p + +NL+ R+ ++ IYT++G v vsvNPYk L+ KIAA0727 17 --DFVLMDTVSMPEFMANLRLRFE-KGRIYTFIGEVVVSVNPYKLLN 60 iYteeiikaYrGkrrgElpPHiFAiAdeAYRsMlsdkeNQsIlisGESGA iY+ ++i+ Y+G+ +E pPH+FAiAd+AY++M+++ ++ +I+isGESGA KIAA0727 61 IYGRDTIEQYKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGA 110 GKTEntKkvmqYlAsvsgstpkvesaevtpnkeegsledqilqsNPiLEA GKTE++K++mqY+A+++ ++ +e+++++ +l sN +LEA KIAA0727 111 GKTEASKYIMQYIAAITNPSQ---------RAEVERVKNMLLKSNCVLEA 151 FGNAKTtRNNNSSRFGKfieIqFdatGsiNvTlvGgkIetYLLEKSRVvy FGNAKT RN+NSSRFGK++ I+Fd +G++ +Gg+I++YLLEKSRV+ KIAA0727 152 FGNAKTNRNDNSSRFGKYMDINFDFKGDP----IGGHINNYLLEKSRVIV 197 QtegERNFHIFYQLLagasaqeekkeLkLtspadpkdYaYLnqsgTynPc Q++gER+FH FYQLL g s+q+ + L+L+ + ++Y+Y ++ + KIAA0727 198 QQPGERSFHSFYQLLQGGSEQM-LRSLHLQ-K-SLSSYNYIHVGA----Q 240 ytvDdgiDDaeeFkdtrkAlkiiGftdeeqrsifrilAAILhLGNieGFk ++ i+Da+eF+ + +A+k+iGf+ ee++++++ilAAILhLGN++ F+ KIAA0727 241 LKS--SINDAAEFRVVADAMKVIGFKPEEIQTVYKILAAILHLGNLK-FV 287 qdqatTGneeqAGvtvsedteeileiiaeLLGvDaeeLekaLlsrriktG +d+ ++ ++e+ ++ ++iiaeLL + ekaLl+r++ tG KIAA0727 288 VDG----DTP-----LIENGKV-VSIIAELLSTKTDMVEKALLYRTVATG 327 gggkRretvtkpqnveqAryaRDALAKaiYsRLFdWiVekiNkaLsakeQ r+ + k + ++A+y RDA+AKaiY+RLF WiV++iN +++k KIAA0727 328 -----RDIIDKQHTEQEASYGRDAFAKAIYERLFCWIVTRINDIIEVKNY 372 as.dSrGGqaaegdDTVSITVVdlPraaldktasfIGvLDIyGFEIFaek +++ + ++ +IGvLDIyGFEIF ++ KIAA0727 373 DTtI-------------------------HGKNTVIGVLDIYGFEIF-DN 396 NSFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIeWtfIdyglDnqac NSFEQ+cINY+NEKLQQ+F+++++k EQEEY+rEgI+W++Idy ++nq++ KIAA0727 397 NSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDY-FNNQII 445 idLIEkKkPpGIlslLDEeCr.fPkatDqtFldKLlqtfsskhprlthFA +dL+E + GI+++LD++C+++ k tD+ Fl+ L++ +kh+ hF KIAA0727 446 VDLVEQ-QHKGIIAILDDACMnVGKVTDEMFLEALNSKL-GKHA---HFS 490 qkpgrfkkgksrqgkteFiikHYAGdVeYnaegfleKNkDpLfddlisll +++ k ++ F+i+HYAGdV Y++ gf++KNkD+Lf+d l+ KIAA0727 491 SRK-LCASDKILEFDRDFRIRHYAGDVVYSVIGFIDKNKDTLFQDFKRLM 539 ksSsdepllaeLFpeeelseAaNltlkapdfeadfdeeeaaaksaklgsg Ss+ p l + +pe l KIAA0727 540 YNSSN-PVLKNMWPEGKL-------------------------------- 556 kgksgkkknfleTvgsqfkeslgeLmktLsstAnlnPHfvRCIKPNekKk + ++k++ T++ +fk+s+++L+ +L s +P++vRCIKPN+kK KIAA0727 557 -SITEVTKRP-LTAATLFKNSMIALVDNLASK---EPYYVRCIKPNDKKS 601 agqFDaslVlhQlrclGvLEigiRirraGFPnRitfdeFlqRYrlLapkt + FD+++++hQ+ +lG+LE ++R+rraGF++R+t+ +Fl+RY++ ++ t KIAA0727 602 PQIFDDERCRHQVEYLGLLE-NVRVRRAGFAFRQTYEKFLHRYKMISEFT 650 wpsgfrpewvgdakkgceliLqslrqtpgnlDkeeyrfGkTKiFfR<-* wp + +++k+++++++++ + +++++GkTKiF+R KIAA0727 651 WPNHD----LPSDKEAVKKLIERC-----GF-QDDVAYGKTKIFIR 686 PF00612.17.fs: domain 1 of 2, from 703 to 723: score 22.1, E = 1.7e-05 *->rraaikIQaawRGylaRkryk<-* r ++ +Q++wRG laR ryk KIAA0727 703 IRIVLFLQKVWRGTLARMRYK 723 PF00612.17.ls: domain 1 of 2, from 703 to 723: score 24.1, E = 0.00047 *->rraaikIQaawRGylaRkryk<-* r ++ +Q++wRG laR ryk KIAA0727 703 IRIVLFLQKVWRGTLARMRYK 723 PF00612.17.ls: domain 2 of 2, from 725 to 745: score 12.2, E = 1.7 *->rraaikIQaawRGylaRkryk<-* ++aa++I +++R+y+++ + + KIAA0727 725 TKAALTIIRYYRRYKVKSYIH 745 PF06017.4.ls: domain 1 of 1, from 806 to 1009: score 266.5, E = 5e-77 *->lKvqAseifkGKKeryrqSvlsvRkFvGDYLgleeInpklqdavase +Kv+A e++kG +++ +++ R+++G YL+ ++++++ +++ KIAA0727 806 AKVAAVEMLKGQRADLGLQ----RAWEGNYLASKP-DTPQTSGTFVP 847 egqiikELR.kd.FgkVlFadkgevLVvKvnRsLsgKpspRaLlLTdkal ++ +EL++kd+++ VlF+++ V+KvnR ++K+++Ra+ +Td++l KIAA0727 848 VA---NELKrKDkYMNVLFSCH----VRKVNR--FSKVEDRAIFVTDRHL 888 ylvdrkkkKkgpEKdqktyvlKrriPlseItsvSlSplqDdlfViHvked y++d + k+y+++++iPl ++t++S+S+++D+l+V+H+ KIAA0727 889 YKMD----------PTKQYKVMKTIPLYNLTGLSVSNGKDQLVVFHT--- 925 lakgkgDlvLeldhkqPkkeeRitElvtvLlktylkatggnklnvnqfsd k+++Dl+++l++kqP++e+Ri+Elv+vL+++++++++ +l+vn +++ KIAA0727 926 --KDNKDLIVCLFSKQPTHESRIGELVGVLVNHFKSEKR--HLQVN-VTN 970 sieyrlkkekwgpGktktvkfqkdatggsellifKkkkghlvsiapq<-* ++++l++ k ++++++ + ++++++f k+++ +++++p+ KIAA0727 971 PVQCSLHG--------KKCTVSVETRLNQPQPDFTKNRSGFILSVPG 1009 PF06017.4.fs: domain 1 of 1, from 806 to 1009: score 264.6, E = 1.8e-76 *->lKvqAseifkGKKeryrqSvlsvRkFvGDYLgleeInpklqdavase +Kv+A e++kG +++ +++ R+++G YL+ ++++++ +++ KIAA0727 806 AKVAAVEMLKGQRADLGLQ----RAWEGNYLASKP-DTPQTSGTFVP 847 egqiikELR.kd.FgkVlFadkgevLVvKvnRsLsgKpspRaLlLTdkal ++ +EL++kd+++ VlF+++ V+KvnR ++K+++Ra+ +Td++l KIAA0727 848 VA---NELKrKDkYMNVLFSCH----VRKVNR--FSKVEDRAIFVTDRHL 888 ylvdrkkkKkgpEKdqktyvlKrriPlseItsvSlSplqDdlfViHvked y++d + k+y+++++iPl ++t++S+S+++D+l+V+H+ KIAA0727 889 YKMD----------PTKQYKVMKTIPLYNLTGLSVSNGKDQLVVFHT--- 925 lakgkgDlvLeldhkqPkkeeRitElvtvLlktylkatggnklnvnqfsd k+++Dl+++l++kqP++e+Ri+Elv+vL+++++++++ +l+vn +++ KIAA0727 926 --KDNKDLIVCLFSKQPTHESRIGELVGVLVNHFKSEKR--HLQVN-VTN 970 sieyrlkkekwgpGktktvkfqkdatggsellifKkkkghlvsiapq<-* ++++l++ k ++++++ + ++++++f k+++ +++++p+ KIAA0727 971 PVQCSLHG--------KKCTVSVETRLNQPQPDFTKNRSGFILSVPG 1009 //