hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-11000583/chunk_1/iprscan-20080502-11000583.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0715 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR01652 ATPase-Plipid: phospholipid-translocati 1152.5 0 1 TIGR01494 ATPase_P-type: ATPase, P-type (transpor 350.2 1.1e-102 6 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR01652 1/1 103 1370 .. 1 1249 [] 1152.5 0 TIGR01494 2/6 400 487 .. 160 234 .. 73.6 1.4e-19 TIGR01494 5/6 919 969 .. 316 366 .. 77.5 1.4e-20 TIGR01494 6/6 1059 1170 .. 360 466 .. 129.5 3e-36 Alignments of top-scoring domains: TIGR01652: domain 1 of 1, from 103 to 1370: score 1152.5, E = 0 *->FpsNkIsTtKYtvlTFlPKnLFeQFkrfANiYFLvvAllqqvPilsp +p+N+ TtKYt +TFlP+nLFeQF+r AN+YFL++ +l+ P + KIAA0715 103 YPGNRTCTTKYTLFTFLPRNLFEQFHRWANLYFLFLVILNWMPSMEV 149 tnrgtsivPLavVLlvtaiKeAiEDirRrkrDkevNNrltevLegveNeN ++r + PLa+VL v +iK++ ED++R++ Dk++N + + e+ KIAA0715 150 FHREITMLPLAIVLFVIMIKDGMEDFKRHRFDKAINCSNIRIYER----- 194 vltdnIsLWRklKKFIsytkedlseelKkkrisRKRHellvtkTVdtish KIAA0715 - -------------------------------------------------- - RsSLdSidayrlSvdydrleldeinleqganeasvvdrsltgssdgkFve ++++v KIAA0715 195 -------------------------------------------KEQTYVQ 201 ikWKdlrVGDIvKVkkderiPADllLLSSSepdGvCYVETaNLDGETNLK ++WKd+rVGD + k +e +PAD+lLL SS+p+G+C ETa LDGETNLK KIAA0715 202 KCWKDVRVGDFIQMKCNEIVPADILLLFSSDPNGICHLETASLDGETNLK 251 lRqAleeTqkmlteediknfsGeIecEqPnasLYsFqGnlkidgkakskI R+ + + ++ + f I+cE+Pn++L +F G ++ ++++ KIAA0715 252 QRRVVKGFSQQEVQFEPELFHNTIVCEKPNNHLNKFKGYMEHPDQTR--- 298 rqlPLspdNiLLRGctLrNTkwviGvVvYTGhDTKlmrNatkaGPsKRSr ++ + +LLRGct rNT+ ++G V+Y+Gh+TK+m+N++++ KRS+ KIAA0715 299 --TGFGCESLLLRGCTIRNTEMAVGIVIYAGHETKAMLNNSGP-RYKRSK 345 iEkelNflIiiLFllLivLclissvgagiysdadgkdldlirwYleldks iE+++N I ++Li +cli++vg +i++++ + + +d + KIAA0715 346 IERRMNIDIFFCIGILILMCLIGAVGHSIWNGTFEEH----PPFDVPDAN 391 eRPGGkdYeYrnaaangFfsfltalILFssLIPISLYVslElvKsvQAty +a gF+ flt +IL + LIPISLYVs+ElvK +Q + KIAA0715 392 G-------SFLPSALGGFYMFLTMIILLQVLIPISLYVSIELVKLGQV-F 433 FInsDlemYhektDtPasvRtSNLnEeLGQVeYiFSDKTGTLTqNiMeFk F +Dl++Y+e+tD + ++R++N+ E+LGQ+ YiFSDKTGTLT N+M F KIAA0715 434 FLSNDLDLYDEETDLSIQCRALNIAEDLGQIQYIFSDKTGTLTENKMVFR 483 KcsIaGvsYgSdgltevkdalrerkgskveees................. c+I G Y+ + ++ + + + + s+ ee + + + + + +++ + KIAA0715 484 RCTIMGSEYS-HQENAKRLETPKELDSDGEEWTqyqclsfsarwaqdpat 532 .................................................. +++++ ++ +++++ + + +++ ++++ +++++++++ +++ +++ + KIAA0715 533 mrsqkgaqplrrsqsarvpiqghyrqrsmghressqppvafsssiekdvt 582 .................................................. ++++ ++ ++ ++ +++++ + + +++++ + + ++ KIAA0715 583 pdknlltkvrdaalwletlsdsrpakaslsttssiadfflalticnsvmv 632 .................................................. +++++++++ + +++++ +++ ++ ++ ++ + + +++ +++ ++++ KIAA0715 633 sttteprqrvtikpsskalgtslekiqqlfqklkllslsqsfsstapsdt 682 .............................akvakDknsmlnelkilksns + +++ + + +++++++++ + +++++ + + sm + + il+s s KIAA0715 683 dlgeslganvattdsderddasvcsggdsTDDGGYRSSMWDQGDILESGS 732 qkapkgftFvdprLvkllktaknkpnakliqeFflaLAiCHtVvPevndd l+ a p ++l++ Pe+ KIAA0715 733 --------------GTSLEEALEAPATDLAR-------------PEF--- 752 ddpeKGeitYQAaSPDEaALVkaArdlGFvfieRtpksIsllieerGkkG Y+A+SPDEaALV aA ++ F++++Rtp ++++++ KIAA0715 753 --------CYEAESPDEAALVHAAHAYSFTLVSRTPEQVTVRLPQGT--- 791 kkeekeYeiLnVlEFnSdRKRMSvIvRfPdgnPGDdgrilLlcKGADsVi +++ +L l F+S RKRMSv+vR P + g+i+ + KGADsVi KIAA0715 792 ---CLTFSLLCTLGFDSVRKRMSVVVRHP-L----TGEIVVYTKGADSVI 833 fkRLssssGs.......ggnqvieeTkeHLenyAsEGLRTLciAyReLse L++ + ++ + +++ ++++ T +HL yA++GLRTLciA + se KIAA0715 834 MDLLEDPACVpdinmekKLRKIRARTQKHLDLYARDGLRTLCIAKKVVSE 883 eEYeeWneeYneAstaLtedReekLdevAelIEkdLiLLGaTAIEDKLQe e++ W + eA ++L+ +R+e+L e A +E L LLGaT+IED+LQe KIAA0715 884 EDFRRWASFRREAEASLD-NRDELLMETAQHLENQLTLLGATGIEDRLQE 932 GVPetIElLreAGIKiWVLTGDKvETAINIGySCrLlsenMelivIkees GVP+tI++LreAGI +WVLTGDK+ETA NI+ SCrLl++ ++ +I++e KIAA0715 933 GVPDTIATLREAGIQLWVLTGDKQETAVNIAHSCRLLNQTDTVYTINTEN 982 ddIrelEdagdldatervveaaikkiLkeyfelegteeefnel....... ++ +e+++ a+ Lk ++el + + ++ + +++++ KIAA0715 983 -----------QETCESILNCALE-ELKQFRELQKPDRKLFGFrlpsktp 1020 kkdh.vpsgnvALvIDGksLkyaLdeeDlekeFLqLAlkCkAViCCRVSP +++++ + ++LvIDGk+L+ ++ lek+FL+L C++V+CCR++P KIAA0715 1021 SITSeAVVPEAGLVIDGKTLNAIFQGK-LEKKFLELTQYCRSVLCCRSTP 1069 sQKAdVVkLVKkstGrlskiTLAIGDGANDVSMIQeADVGVGIsGkEGmQ +QK+ +VkLV++ +l ++TL+IGDGANDVSMIQ+AD+G+GIsG+EGmQ KIAA0715 1070 LQKSMIVKLVRD---KLRVMTLSIGDGANDVSMIQAADIGIGISGQEGMQ 1116 AvMASDFAIgQFrFLekLLLVHGrWSYkRiskmIlYfFYKNlifalilFW AvM+SDFAI+ F++L+kLLLVHG+W+Y R++ m+ Y YKN+ + lFW KIAA0715 1117 AVMSSDFAITRFKHLKKLLLVHGHWCYSRLARMVVYYLYKNVCYVNLLFW 1166 YsfyngFsGqtlyedWymvlYNvfFTalPVivLGvfDqDvsaslslryPq Y+f+ gFs +t +++W m ++N+fFT+lP+ v Gv+D+D+sa+++l P+ KIAA0715 1167 YQFFCGFSSSTMIDYWQMIFFNLFFTSLPPLVFGVLDKDISAETLLALPE 1216 LYreGqkgkefstkvFwgwmldglyQSlviFffpilayklgdfvssGevd LY+ Gq+ + ++ +Fw m d++yQSl++Ff+p+layk+ d+ KIAA0715 1217 LYKSGQNSECYNLSTFWISMVDAFYQSLICFFIPYLAYKGSDI------- 1259 dfssvGvivfTalVvvvnlkiaLeinrWnwisliaiwgSiLvwlifvivy d G+ + T++ +++l+ a+e +W+ ++++ gS L++++ y KIAA0715 1260 DVFTFGTPINTISLTTILLHQAMEMKTWTIFHGVVLLGSFLMYFLVSLLY 1309 ssifptlPadisrefykaakrvmstfgFWlvLlvivlisLLPrFtykalq + + ++ ++ y++ ++ +s + F+lv +++++++LLPr+ + +lq KIAA0715 1310 NATC--VICNSPTNPYWVMEGQLSNPTFYLVCFLTPVVALLPRYFFLSLQ 1357 rlfrPtdyeiVqE<-* ++ ++ + ++q KIAA0715 1358 GTCGKSLISKAQK 1370 TIGR01494: domain 2 of 6, from 400 to 487: score 73.6, E = 1.4e-19 *->tffkiflralillviaiPiaLpvavtialavgd.............k ++f+ fl+++ill+++iPi+L+v+++++++ + +++ + +++ KIAA0715 400 GGFYMFLTMIILLQVLIPISLYVSIELVKLGQVfflsndldlydeeT 446 rmailvrslnalEelGqvdyicsDKTGTLTenkmtfkkvyi<-* ++ i++r ln+ E+lGq++yi+sDKTGTLTenkm f++++i KIAA0715 447 DLSIQCRALNIAEDLGQIQYIFSDKTGTLTENKMVFRRCTI 487 TIGR01494: domain 5 of 6, from 919 to 969: score 77.5, E = 1.4e-20 *->ellGltaieDpLredvketIeeLkraGikvwMlTGDnveTAiaIAke +llG+t+ieD+L+e+v++tI++L++aGi +w+lTGD++eTA++IA++ KIAA0715 919 TLLGATGIEDRLQEGVPDTIATLREAGIQLWVLTGDKQETAVNIAHS 965 cglf<-* c+l+ KIAA0715 966 CRLL 969 TIGR01494: domain 6 of 6, from 1059 to 1170: score 129.5, E = 3e-36 *->AkecglfARvsPeqKaeiVellq.krgaiVamiGDGaNDapALkaAD ++++ l++R++P+qK iV+l+++k ++++ iGDGaND+++++aAD KIAA0715 1059 CRSV-LCCRSTPLQKSMIVKLVRdKLRVMTLSIGDGANDVSMIQAAD 1104 VGiaig......AkaaaDivltddnlslivlllvhGRwtykrikklilya +Gi+i+++++ +A++++D+++t++ +l +lllvhG+w+y+r++++++y+ KIAA0715 1105 IGIGISgqegmqAVMSSDFAITRF-KHLKKLLLVHGHWCYSRLARMVVYY 1153 lyynliliillfvlsvi<-* ly+n++ + llf+++++ KIAA0715 1154 LYKNVCYVNLLFWYQFF 1170 //