# /usr/local/bin/fasta34 -b50 -d10 -E0.01 -H -O./tmp/pf12310.fasta.huge -Q ../query/KIAA0714.ptfa ./tmplib.23663 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 KIAA0714, 1780 aa
 vs ./tmplib.23663 library

1985725 residues in  2037 sequences
  Expectation_n fit: rho(ln(x))= 5.0711+/-0.00506; mu= 17.2362+/- 0.345
 mean_var=94.0712+/-22.534, 0's: 0 Z-trim: 4  B-trim: 16 in 1/39
 Lambda= 0.132235

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 41, opt: 29, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(2037)
KIAA0675  ( 1217 res)   hk02566                    (1217)  142 38.8  0.0092


>>KIAA0675  ( 1217 res)   hk02566                         (1217 aa)
 initn:  77 init1:  49 opt: 142  Z-score: 141.5  bits: 38.8 E(): 0.0092
Smith-Waterman score: 142;  35.714% identity (55.714% similar) in 70 aa overlap (1710-1776:1136-1197)

    1680      1690      1700      1710        1720      1730       
KIAA07 GKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWK--NNVDKRFEGVEDCMICFSVIH
                                     .: : :.  .: :.. :  : :.::   . 
KIAA06 SNVNCVSPSHSPSQPDAAQPPKPAWRPLTSQGPATWEGASNPDEEEEEEEPCVICHENLS
        1110      1120      1130      1140      1150      1160     

      1740       1750      1760      1770      1780                
KIAA07 GFNYS-LPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF                
         : : ::      : .:::. :.  :.   ...::: ::                    
KIAA06 PENLSVLP------CAHKFHAQCIRPWLM--QQGTCPTCRLHVLLPEEFPGHPSRQLPKI
        1170            1180        1190      1200      1210       




1780 residues in 1 query   sequences
1985725 residues in 2037 library sequences
 Scomplib [34.26]
 start: Thu Dec 18 15:13:10 2008 done: Thu Dec 18 15:13:11 2008
 Total Scan time:  0.940 Total Display time:  0.040

Function used was FASTA [version 34.26.5 April 26, 2007]