hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10563455/chunk_1/iprscan-20080502-10563455.nocrc
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Query sequence: KIAA0713
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00313                                                 363.2   1.6e-104   1
SM00312                                                 123.5    2.4e-32   1
SM00315                                                 121.7    7.8e-32   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00313    1/1     154   341 ..     1   226 []   363.2 1.6e-104
SM00315    1/1     430   570 ..     1   121 []   121.7  7.8e-32
SM00312    1/1     630   744 ..     1   142 []   123.5  2.4e-32

Alignments of top-scoring domains:
SM00313: domain 1 of 1, from 154 to 341: score 363.2, E = 1.6e-104
                   *->paqLeeeLesiIskIirdYVqsWYkkisvSeDasFlkeirqtlkyil
                      +++++e+L+++I++++rdYVq+WY+  ++S+D+sFl+eirqtl+++l
    KIAA0713   154    ANIIDEPLQQVIQFSLRDYVQYWYY--TLSDDESFLLEIRQTLQNAL 198  

                   aelkrrlsrqDsaelissklleIlkklistiedalEavlrkaspqepite
                   +++++r++++D+++++   +++I+++++++++     v+rka  q++ite
    KIAA0713   199 IQFATRSKEIDWQPYF---TTRIVDDFGTHLR-----VFRKA--QQKITE 238  

                   idlqiaetaedNYKihkaLsekenEltKEvCRDLvCtsPKDEEkyvRqlv
                   +d+q+++taed   ++++++e+e+E++KEvCRDLvCtsPKDEE+++R+l+
    KIAA0713   239 KDDQVKGTAED---LVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLC 285  

                   elLLklLlPedelesrlhDDDsPLRLFGRGKnERPWPsKsvrvllrEvLa
                   e+LL+lLlP+++++++++                       r+++rE+La
    KIAA0713   286 EVLLYLLLPPGDFQNKIM-----------------------RYFVREILA 312  

                   tavilplIsklSdPDtiNlviIllfsesr<-*
                   ++++lplI++lSdPD+iN+++I+++++s+   
    KIAA0713   313 RGILLPLINQLSDPDYINQYVIWMIRDSN    341  

SM00315: domain 1 of 1, from 430 to 570: score 121.7, E = 7.8e-32
                   *->sleklLendpiGrllFreFLksefseykenleFWlaveefkkaed..
                       l+++L  d ++++ F++++++++++   +l FW+ ve+++++++++
    KIAA0713   430    PLDSIL-VDNVALQFFMDYMQQTGGQ--AHLFFWMTVEGYRVTAQqq 473  

                   ...................eersskAreIydkylspeapkesevnldsdt
                    +   ++++++++++++++  ++++A  Iy++yls++a+   +v +d+++
    KIAA0713   474 levllsrqrdgkhqtnqtkGLLRAAAVGIYEQYLSEKASP--RVTVDDYL 521  

                   reeieenlee..pppdlFdeAqrevyell..ekdsyprFLkSdyYlrfL<
                   +++++++l++++p+p++Fd++qr vyel+ + + +yp F++  +Y r+L 
    KIAA0713   522 VAKLADTLNHedPTPEIFDDIQRKVYELMlrDERFYPSFRQNALYVRML  570  

                   -*
                     
    KIAA0713     -    -    

SM00312: domain 1 of 1, from 630 to 744: score 123.5, E = 2.4e-32
                   *->dniaivavveeetsgkkrgdgkhyyyvieietstnedveewtvyRRY
                       +++ va+v++       +++ +++y+i +++++ +++e+w++yRRY
    KIAA0713   630    YDPYAVAGVCND------HGKTYALYAITVHRRNLNSEEMWKTYRRY 670  

                   sdFleLhskLlkkfpqekrrriiPplPekkllgryreraekesmkvkksl
                   sdF+++h+++ ++f     ++ i +lPekk+                  +
    KIAA0713   671 SDFHDFHMRITEQFES---LSSILKLPEKKT------------------F 699  

                   nnfseefiekRrrgLerYLqkllnhPelinhyrvsevvleFLess<-*
                   nn++++f+ekR+++L++YLq ll  +++ + +++ + v++FLe++   
    KIAA0713   700 NNMDRDFLEKRKKDLNAYLQLLLAPEMMKASPALAHYVYDFLENK    744  

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