hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10544723/chunk_1/iprscan-20080502-10544723.nocrc
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Query sequence: KIAA0712
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00620.17.fs RhoGAP domain                                  232.3    3.1e-68   1
PF00620.17.ls RhoGAP domain                                  234.2    2.6e-67   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00620.17.fs   1/1      69   222 ..     1   155 []   232.3  3.1e-68
PF00620.17.ls   1/1      69   222 ..     1   155 []   234.2  2.6e-67

Alignments of top-scoring domains:
PF00620.17.fs: domain 1 of 1, from 69 to 222: score 232.3, E = 3.1e-68
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdl.
                      P+++++C++f+e++G  ++GIyR+sG +s i++Lr++fd+++++dl+
    KIAA0712    69    PQVLQSCTAFIERYG-IVDGIYRLSGVASNIQRLRHEFDSEHVPDLt 114  

                   ndleeedvhvvAslLKlFLReLPePLltfelyeefieaaaksedeeerle
                   +++  +d+h+v sl Kl++ReLP+PLlt++lye+f + a++  ++eerl 
    KIAA0712   115 KEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSD-AVSAATDEERLI 163  

                   alrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLl
                   ++++++++LPp++++tL++L++hL+  a+++++++M a+NLAiv++P+Ll
    KIAA0712   164 KIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLL 213  

                   rppdgdsad<-*
                   r+++ +sa+   
    KIAA0712   214 RSKQIESAC    222  

PF00620.17.ls: domain 1 of 1, from 69 to 222: score 234.2, E = 2.6e-67
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdl.
                      P+++++C++f+e++G  ++GIyR+sG +s i++Lr++fd+++++dl+
    KIAA0712    69    PQVLQSCTAFIERYG-IVDGIYRLSGVASNIQRLRHEFDSEHVPDLt 114  

                   ndleeedvhvvAslLKlFLReLPePLltfelyeefieaaaksedeeerle
                   +++  +d+h+v sl Kl++ReLP+PLlt++lye+f + a++  ++eerl 
    KIAA0712   115 KEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSD-AVSAATDEERLI 163  

                   alrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLl
                   ++++++++LPp++++tL++L++hL+  a+++++++M a+NLAiv++P+Ll
    KIAA0712   164 KIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLL 213  

                   rppdgdsad<-*
                   r+++ +sa+   
    KIAA0712   214 RSKQIESAC    222  

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